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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4708533..4710431- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006109-T1 ID=KJC3_006109-T1|Name=KJC3_006109-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1899bp|location=Sequence derived from alignment at ch4:4708533..4710431- (Aspergillus niger KJC3)
ATGGTAGGCAAAACCACACAATCATCGACATCCTTCCCCGACATCCTCGA
TGTCCTCATCATCGGCGCCGGCCCCTGCGGCCTAGCAGTCGCCGCACGCC
TCCGCGAAGAAACTCCCTCCGCCATGTTCACCGACGACGAACACCAACGC
TACCACTGGATCAACAAGCACAGTGGTCGAATGGCGCTGGTGCAGGCGCA
CCGCGGGAAACTGAAGGGCGTCAAGGCGGAGAAGTGGCAGAGATATGATG
ATAGCCATTATTCACGGAGGGGGTCTTCGTCTTCTTCTGGTTCTGGCTCT
GCTCCGCCGTCGTTGTCTTCGTCTGTTACGTCTGATGAGGGTATGTATAT
GGGAGAGGGGAGTAAGGGTGGGGATGAGAATGGGGGCATATCTACGCTCG
TACTGGATAGTTCAGGGGACAAGTGGATGGAGAGATGGAACAGGGCGTTC
AAGACATTAGAGATTGAGCAGCTGAGGAGCCCGATGTTCTTTCATGTGGA
TCCCAGGGATCGGGATGGGATGTTGGCGTATACGAGGGAGGTTAGGAGGG
AGAGGGATTTATGGGAGATTTCGGGGTGCGTGGGGAAGGAGTTGAGTAAG
CATAAGAAGAAGAAGATGAGGTCGAGGGCGCAGTGAGTGAATCCTTCGTT
ACATACAGTGACTGTCATTCTGTTTGCTAACTATGTGGGTAATCAGGGCC
GTTGGGGAAGTGGAGATTGATGAAAGAGATCGTAAAGATTACTTCTCGCC
GTCGACGGATTTGTTTGGAGATTACTGTGGGAGCATTGTATCACGGTACG
GGCTGGACGCGCCGGGGATGATCAGGCAGTGCGAAGTAAATGATATATCA
TACGACTATCATTCAGAATTGTCGCCGTCTGACAAGATCTTTACTGTTAC
TACGGCTGAGGGCAATCGGTTTTATAGTCGTGTGGTGGTGTTGGCTATTG
GGCCGGGGAGGACGAAGATACTTCCGTTCAAGCTGTCCGGTGAGGAGGAG
CAAGGTGCTTGTCATAGCACAGAGATTCGCATGTTTCCAAGTATCAATGT
GAAGGCCAAGATTAAGCAACGTCAGGAGACGAACGTGGTGGTTGTTGGGG
GCGGACTGTCGTCAGCGCAAGTGGTGGACATGGCCATTCGGCGAGGGGTG
ACCAAAGTATGGTTTCTTTTGAGGTCGGATTTTAAAGGTAAGTGGGCATG
TTGCACAGCCTCACTGCATGTTCCATTCAGAGGTGGGGGATGCTGACCAG
ATGGCTTCTAGTCAAGCACTTCGACCTCGCATTGAACTGGATGGGCAAGT
TCAAGAACTTCGAAAAGGCAGCATTCTGGTCCGCAGACACGGACGAGGAA
CGCCTTGAGATGATCAAAGCGGCGCGTAATGGCGGCAGTATCACGCCACG
GTATCAGAAGATTCTGAAGCAACATGTGGCAGCCCATCGGCTTTCTATAC
ACCCACGCACCGTCATCTGCGGCAAGGAGTACTGCGCCTCCTCGCGCACA
TGGCGTCTTACGACAGATCCTCCGATCCCTGAACTTCCTCGCATCGATTA
TATATACTTTGCAACAGGCATGCAGGCCGATGTGAATGAGCTCCCATTGC
TCCAACGCATGAACCGTGAATATCCAATTGAAACCAAGCAGGGATTGCCT
TGCATCACGGATGACTTGATGTGGCAATCGAACGTGCCACTTTTCTTGAC
AGGCCGGTTGGGATCCCTTCGTCTGGGACCCGGTGCTGCCAATCTTGAGG
GAGCGAGGCTAGGAGCGGAGCGTATTGCCTGGGCGATGGAGGATGTGTTG
GGTAGAAAAGGATCAGAGGATACGGGGTCTGAACGATCCAAGCAGTGCTT
TTGCGGGTTAGGGAATCGGTATGCTGAGCTTGCTAACGTGGACGAATAA back to topCoding sequence (CDS) from alignment at ch4:4708533..4710431- >KJC3_006109-T1 ID=KJC3_006109-T1|Name=KJC3_006109-T1|organism=Aspergillus niger KJC3|type=CDS|length=5283bp|location=Sequence derived from alignment at ch4:4708533..4710431- (Aspergillus niger KJC3)
TCAAGCACTTCGACCTCGCATTGAACTGGATGGGCAAGTTCAAGAACTTC
GAAAAGGCAGCATTCTGGTCCGCAGACACGGACGAGGAACGCCTTGAGAT
GATCAAAGCGGCGCGTAATGGCGGCAGTATCACGCCACGGTATCAGAAGA
TTCTGAAGCAACATGTGGCAGCCCATCGGCTTTCTATACACCCACGCACC
GTCATCTGCGGCAAGGAGTACTGCGCCTCCTCGCGCACATGGCGTCTTAC
GACAGATCCTCCGATCCCTGAACTTCCTCGCATCGATTATATATACTTTG
CAACAGGCATGCAGGCCGATGTGAATGAGCTCCCATTGCTCCAACGCATG
AACCGTGAATATCCAATTGAAACCAAGCAGGGATTGCCTTGCATCACGGA
TGACTTGATGTGGCAATCGAACGTGCCACTTTTCTTGACAGGCCGGTTGG
GATCCCTTCGTCTGGGACCCGGTGCTGCCAATCTTGAGGGAGCGAGGCTA
GGAGCGGAGCGTATTGCCTGGGCGATGGAGGATGTGTTGGGTAGAAAAGG
ATCAGAGGATACGGGGTCTGAACGATCCAAGCAGTGCTTTTGCGGGTTAG
GGAATCGGTATGCTGAGCTTGCTAACGTGGACGAATAAGGCCGTTGGGGA
AGTGGAGATTGATGAAAGAGATCGTAAAGATTACTTCTCGCCGTCGACGG
ATTTGTTTGGAGATTACTGTGGGAGCATTGTATCACGGTACGGGCTGGAC
GCGCCGGGGATGATCAGGCAGTGCGAAGTAAATGATATATCATACGACTA
TCATTCAGAATTGTCGCCGTCTGACAAGATCTTTACTGTTACTACGGCTG
AGGGCAATCGGTTTTATAGTCGTGTGGTGGTGTTGGCTATTGGGCCGGGG
AGGACGAAGATACTTCCGTTCAAGCTGTCCGGTGAGGAGGAGCAAGGTGC
TTGTCATAGCACAGAGATTCGCATGTTTCCAAGTATCAATGTGAAGGCCA
AGATTAAGCAACGTCAGGAGACGAACGTGGTGGTTGTTGGGGGCGGACTG
TCGTCAGCGCAAGTGGTGGACATGGCCATTCGGCGAGGGGTGACCAAAGT
ATGGTTTCTTTTGAGGTCGGATTTTAAAGATGGTAGGCAAAACCACACAA
TCATCGACATCCTTCCCCGACATCCTCGATGTCCTCATCATCGGCGCCGG
CCCCTGCGGCCTAGCAGTCGCCGCACGCCTCCGCGAAGAAACTCCCTCCG
CCATGTTCACCGACGACGAACACCAACGCTACCACTGGATCAACAAGCAC
AGTGGTCGAATGGCGCTGGTGCAGGCGCACCGCGGGAAACTGAAGGGCGT
CAAGGCGGAGAAGTGGCAGAGATATGATGATAGCCATTATTCACGGAGGG
GGTCTTCGTCTTCTTCTGGTTCTGGCTCTGCTCCGCCGTCGTTGTCTTCG
TCTGTTACGTCTGATGAGGGTATGTATATGGGAGAGGGGAGTAAGGGTGG
GGATGAGAATGGGGGCATATCTACGCTCGTACTGGATAGTTCAGGGGACA
AGTGGATGGAGAGATGGAACAGGGCGTTCAAGACATTAGAGATTGAGCAG
CTGAGGAGCCCGATGTTCTTTCATGTGGATCCCAGGGATCGGGATGGGAT
GTTGGCGTATACGAGGGAGGTTAGGAGGGAGAGGGATTTATGGGAGATTT
CGGGGTGCGTGGGGAAGGAGTTGAGTAAGCATAAGAAGAAGAAGATGAGG
TCGAGGGCGCATCAAGCACTTCGACCTCGCATTGAACTGGATGGGCAAGT
TCAAGAACTTCGAAAAGGCAGCATTCTGGTCCGCAGACACGGACGAGGAA
CGCCTTGAGATGATCAAAGCGGCGCGTAATGGCGGCAGTATCACGCCACG
GTATCAGAAGATTCTGAAGCAACATGTGGCAGCCCATCGGCTTTCTATAC
ACCCACGCACCGTCATCTGCGGCAAGGAGTACTGCGCCTCCTCGCGCACA
TGGCGTCTTACGACAGATCCTCCGATCCCTGAACTTCCTCGCATCGATTA
TATATACTTTGCAACAGGCATGCAGGCCGATGTGAATGAGCTCCCATTGC
TCCAACGCATGAACCGTGAATATCCAATTGAAACCAAGCAGGGATTGCCT
TGCATCACGGATGACTTGATGTGGCAATCGAACGTGCCACTTTTCTTGAC
AGGCCGGTTGGGATCCCTTCGTCTGGGACCCGGTGCTGCCAATCTTGAGG
GAGCGAGGCTAGGAGCGGAGCGTATTGCCTGGGCGATGGAGGATGTGTTG
GGTAGAAAAGGATCAGAGGATACGGGGTCTGAACGATCCAAGCAGTGCTT
TTGCGGGTTAGGGAATCGGTATGCTGAGCTTGCTAACGTGGACGAATAAG
GCCGTTGGGGAAGTGGAGATTGATGAAAGAGATCGTAAAGATTACTTCTC
GCCGTCGACGGATTTGTTTGGAGATTACTGTGGGAGCATTGTATCACGGT
ACGGGCTGGACGCGCCGGGGATGATCAGGCAGTGCGAAGTAAATGATATA
TCATACGACTATCATTCAGAATTGTCGCCGTCTGACAAGATCTTTACTGT
TACTACGGCTGAGGGCAATCGGTTTTATAGTCGTGTGGTGGTGTTGGCTA
TTGGGCCGGGGAGGACGAAGATACTTCCGTTCAAGCTGTCCGGTGAGGAG
GAGCAAGGTGCTTGTCATAGCACAGAGATTCGCATGTTTCCAAGTATCAA
TGTGAAGGCCAAGATTAAGCAACGTCAGGAGACGAACGTGGTGGTTGTTG
GGGGCGGACTGTCGTCAGCGCAAGTGGTGGACATGGCCATTCGGCGAGGG
GTGACCAAAGTATGGTTTCTTTTGAGGTCGGATTTTAAAGATGGTAGGCA
AAACCACACAATCATCGACATCCTTCCCCGACATCCTCGATGTCCTCATC
ATCGGCGCCGGCCCCTGCGGCCTAGCAGTCGCCGCACGCCTCCGCGAAGA
AACTCCCTCCGCCATGTTCACCGACGACGAACACCAACGCTACCACTGGA
TCAACAAGCACAGTGGTCGAATGGCGCTGGTGCAGGCGCACCGCGGGAAA
CTGAAGGGCGTCAAGGCGGAGAAGTGGCAGAGATATGATGATAGCCATTA
TTCACGGAGGGGGTCTTCGTCTTCTTCTGGTTCTGGCTCTGCTCCGCCGT
CGTTGTCTTCGTCTGTTACGTCTGATGAGGGTATGTATATGGGAGAGGGG
AGTAAGGGTGGGGATGAGAATGGGGGCATATCTACGCTCGTACTGGATAG
TTCAGGGGACAAGTGGATGGAGAGATGGAACAGGGCGTTCAAGACATTAG
AGATTGAGCAGCTGAGGAGCCCGATGTTCTTTCATGTGGATCCCAGGGAT
CGGGATGGGATGTTGGCGTATACGAGGGAGGTTAGGAGGGAGAGGGATTT
ATGGGAGATTTCGGGGTGCGTGGGGAAGGAGTTGAGTAAGCATAAGAAGA
AGAAGATGAGGTCGAGGGCGCATCAAGCACTTCGACCTCGCATTGAACTG
GATGGGCAAGTTCAAGAACTTCGAAAAGGCAGCATTCTGGTCCGCAGACA
CGGACGAGGAACGCCTTGAGATGATCAAAGCGGCGCGTAATGGCGGCAGT
ATCACGCCACGGTATCAGAAGATTCTGAAGCAACATGTGGCAGCCCATCG
GCTTTCTATACACCCACGCACCGTCATCTGCGGCAAGGAGTACTGCGCCT
CCTCGCGCACATGGCGTCTTACGACAGATCCTCCGATCCCTGAACTTCCT
CGCATCGATTATATATACTTTGCAACAGGCATGCAGGCCGATGTGAATGA
GCTCCCATTGCTCCAACGCATGAACCGTGAATATCCAATTGAAACCAAGC
AGGGATTGCCTTGCATCACGGATGACTTGATGTGGCAATCGAACGTGCCA
CTTTTCTTGACAGGCCGGTTGGGATCCCTTCGTCTGGGACCCGGTGCTGC
CAATCTTGAGGGAGCGAGGCTAGGAGCGGAGCGTATTGCCTGGGCGATGG
AGGATGTGTTGGGTAGAAAAGGATCAGAGGATACGGGGTCTGAACGATCC
AAGCAGTGCTTTTGCGGGTTAGGGAATCGGTATGCTGAGCTTGCTAACGT
GGACGAATAAGGCCGTTGGGGAAGTGGAGATTGATGAAAGAGATCGTAAA
GATTACTTCTCGCCGTCGACGGATTTGTTTGGAGATTACTGTGGGAGCAT
TGTATCACGGTACGGGCTGGACGCGCCGGGGATGATCAGGCAGTGCGAAG
TAAATGATATATCATACGACTATCATTCAGAATTGTCGCCGTCTGACAAG
ATCTTTACTGTTACTACGGCTGAGGGCAATCGGTTTTATAGTCGTGTGGT
GGTGTTGGCTATTGGGCCGGGGAGGACGAAGATACTTCCGTTCAAGCTGT
CCGGTGAGGAGGAGCAAGGTGCTTGTCATAGCACAGAGATTCGCATGTTT
CCAAGTATCAATGTGAAGGCCAAGATTAAGCAACGTCAGGAGACGAACGT
GGTGGTTGTTGGGGGCGGACTGTCGTCAGCGCAAGTGGTGGACATGGCCA
TTCGGCGAGGGGTGACCAAAGTATGGTTTCTTTTGAGGTCGGATTTTAAA
GATGGTAGGCAAAACCACACAATCATCGACATCCTTCCCCGACATCCTCG
ATGTCCTCATCATCGGCGCCGGCCCCTGCGGCCTAGCAGTCGCCGCACGC
CTCCGCGAAGAAACTCCCTCCGCCATGTTCACCGACGACGAACACCAACG
CTACCACTGGATCAACAAGCACAGTGGTCGAATGGCGCTGGTGCAGGCGC
ACCGCGGGAAACTGAAGGGCGTCAAGGCGGAGAAGTGGCAGAGATATGAT
GATAGCCATTATTCACGGAGGGGGTCTTCGTCTTCTTCTGGTTCTGGCTC
TGCTCCGCCGTCGTTGTCTTCGTCTGTTACGTCTGATGAGGGTATGTATA
TGGGAGAGGGGAGTAAGGGTGGGGATGAGAATGGGGGCATATCTACGCTC
GTACTGGATAGTTCAGGGGACAAGTGGATGGAGAGATGGAACAGGGCGTT
CAAGACATTAGAGATTGAGCAGCTGAGGAGCCCGATGTTCTTTCATGTGG
ATCCCAGGGATCGGGATGGGATGTTGGCGTATACGAGGGAGGTTAGGAGG
GAGAGGGATTTATGGGAGATTTCGGGGTGCGTGGGGAAGGAGTTGAGTAA
GCATAAGAAGAAGAAGATGAGGTCGAGGGCGCA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR025700 |
| DBxref | InterPro:IPR036188 |
| DBxref | PFAM:PF13434 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4708533..4710431 - |
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