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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4719377..4723089+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006112-T1 ID=KJC3_006112-T1|Name=KJC3_006112-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3713bp|location=Sequence derived from alignment at ch4:4719377..4723089+ (Aspergillus niger KJC3)
ACTGAAGTGAGTTCTCACTGCTACTACTCGAGTTCTGACACTGCGATTCG
ACTACTGACCATCCTCGTCCCTTCTCCATCTTCAGGAACACCTCCCCCTT
TTTCTTCTCCAACCCCTCTTGAGATATTCTACACTCTCTTTATAACACGC
TATCCCGCCTCGTCGTTCGTTCCCGCCCCTCCGATCGGGAGCATGGCTGC
ATTGGCTGTCACTCCTTTCCCATCCAGATCATGATCCCGCTTAGCCCGGT
ATCTGTGATACTACCCAACTCGCACGGCTCTCGGGAGCCCCGTATCACCC
GCCATGGGCAACGACAATAAATTCGAATATGAAGCCCTTCCAATCCCATC
CTACGAAGAGGCCATCGGCGTTCGTCCAGGCTCGTCCCGATCGCACCTCG
ATTCTTCCGAAGAAGTGAGCGACAACACCGAACGACAAGGCTTGCTCCAA
CGCGGTCCCCAGACGGGTGCCCGCGGAGAGACTAGACCTCATGGATATCA
CCCTCCCACCGTCGAGTCCGCTCGGAATAGCCTCGATGACCTCGAGTCCG
GGTCCGGATCGGATAGGGGCTCGCTCGAGGAGTTACAGCGGGAACTGGCT
CAGATGGACGTGGAGGACGCTGGTCAGCAAACGTCATCTCAACGCTCTCG
CCTGCGGTCTCGGTTTTCGAAGCGATTCAACGATTTGACCCGTACATTAT
CCTCGTTCAATCTACCGTTTCGCCGTTATTTGCCAAGATTGCCAGATTTC
AGGTTTACCATCCACCTAGACGAAGCTCGGTCGGGCTTAAAACACAATGG
ATGCATGATCTTGTTACGTGTCTTTGGATTACTTCTGGTGGTCACCATCG
TGTATATCTTCTTCATTTCGGACCTTTTCAGCATGAATAACCGTTTTATC
ATGGGCCAATCTTACAGCGCCGCATCCGTCGAGAACTTCGTTCAGGGTCA
TATCAATGAGACCAGCATTGCAGAAAACCTGAAGAAGCTGACCGCATACC
CTCATATTGCCGGTACGGAAGGCAGTTTTGTTCTGGCGGAATGGGTGGCA
TCGGAGTTCAACAAGGCGAACTTCGACGAGGTCGAGATGGAAGAATTCCA
GGTCTACTTAAATTACCCCCAGCAAGACGGTCGGAGGGTAGCGATCATCG
ATCCTCCCGACCTTACCTGGGTGGCTACTTTGGAGGAGGATAACGAGCAG
ACCTTGGTATTCCATGGCCACTCGAAGTCGGGGAACGTCACTGGTCACCT
CGTCTATGCAAACTACGGCTCCCGAGAAGATTTCCAATACCTCAAAGATC
AAGGAGTTGCCTTGGACGGCTCCATAGCGCTGGTCCGTTATGGTGGGTCA
GAGAGCGATCGGGCCTTGAAGGTCAAAGCCGCAGAATTGGCTGGTGCAGC
TGGTTGTATAATATATTCCGATCCCGCAGAGGATGGCTTTGTCCGGGGCC
CCGCCTTTCCAGACGGACGCTATATGCCAGCAGACGGGACACAAAGAGGC
GCTGTCAGTTTGATGTCATGGGTGGTCGGTGATGTACTCTCGCCAGGTTT
TGCATCGACACCGGATGAGAAAGTGAGACTCAAGCCAGAGGATAGCCGGG
GACTGACGGCTATTCCTAGCATCCCTCTCGCCTGGCGCGATGCCCAAAGG
CTCTTGCAGGTGCTCAAGGGCCACGGTTCGAAGGTGCCAGCCAAGTGGGT
TGGTGGTGTTCCGGATGTGAACCAGTGGTGGACCGGGGATGCATCGTCGC
CCACCGTCAACCTCATGAACATCCAAGATGAGGTAGAAAGACAGCCCATA
TACAACGTGGTTGGAAGGATCATCGGGTTGGAGCAGCCGGAGAAAAAGAT
TATTGTCGGTAACCACCGAGACTCGTGGTGCTTAGGAAGTGCGGATCCAG
GTAGTGGCACGGCTGTGTTTCTTGAGCTGGCTCGAGTTTTCGGGGAACTG
CTGACATTTGGCTGGCGCCCACTACGCACCATCGAGTTTATTAGCTGGGA
CGCTGAAGAGTACAACCTCGTTGGCTCGACGGAACACGTGGAAAAGGAAT
TGCAAGCACTTCGTGAAAACGCATATGCCTACATCAACGTCGATGTTGGT
GTAAGCGGCAAAGAATTTGACGCCGCAGGAAGTCCGCTTTTCGAGAGCGT
CATAATGCAGATACTCGGTCGCATATCGGATCCTGACAGCAATGAGACGC
TCAAAGATATTTGGGAGAAGAAGAAGAAGAGACTCGGACCTCTCGGTGCC
GGAAGCGACTACGTCGCTTTTCAAGACATCGCCGGAACTTCCAGTGTCGA
TTTTGGATTCATCGGCGAACCTTTCCCCTACCACAGTTGCTATGAGAACT
GGGACTGGATGACCAAATTTGGTGACCCCGGATTTCAATACCACAAGATC
CTAGGCCAGTTCTGGGGTCTGTTACTTCTCCAGCTTGCAGACAGCCCCAT
CCTGCCTTTCGATTTGGAGGCATATGCGGCGCACGTTGGTGGCTACATTT
CTGGCCTGGAAAATTATGCCAAGTCAAGGAATGTCCCAATTGCCGATAAC
ACACAGAACGCTGCTCGGGATACCTCTGTGACCTTCAAGCCCTTGTATGA
AGCCGCGGCGAAGTTCAAGGACGATGCGTCTCATTTTCAGGAGTGGGCTA
GGGTCTGGCACGATGCTGTTTGGGGAGCTGGTGGGTTTGAGAACAACGTT
GTTGCTGTTCAGCGGCTGGCACATAATACGCGGATGGCTCATTTCGAAAC
CCATCTTCTCGACGACAGGCCAGATGGCGGCGTAAGTGATTCAACTCTTT
CCCATATGGAACAAAGACTAACCACACCTGAATAGGTCCCGAATCGCACG
CAATTCAAGCATGTCATCTTCGGCCCTGAACTTTGGTCCGGCTATGACCC
TACTCTCTTCCCTGCTATTCGCGACAGCATCGATTCTGGCAATTGGACGC
TAACCCAGGAGTGGATTGATCGGGTCTCCAATATCATCAGTGACGCGAGC
GACCACCTCGTCCATAAGAACTGATCATACTGCTGCCACACGGAATAAAT
CCCTCCCCACTTTCTCCTATACGACCTTTGGCCTCTATCTACCTCCTAGG
CCTCCTACCGCCAAATGACGACCCTAATCTGTCATAAACGCAACGCCCGC
TATAGACGCCATCTCCCGACTCTGCACAGTATACCTCCACATCTCTCGCC
TCCTGTGTATCTTCTTTTCGCGCAAAAGATTCCCTTCCTTGGCATTCGTA
TTGTCCTCTGATAGACGGGCATTGACGAGCCCTCTTCTTTCCTACCAAGC
CATATTGTCGCCATGCATTTGTGTCATGTCATGCCTATCGGATCATATAT
CTTCTTGTATCTAGTCACCTTGACCCCCCGCCCCCCACGGATCCGGGCCT
CTTATGCGTCATCTTCTTTCTACTGTCTCTTCTATCTTCTCGTCTCTGTA
TCTACATTTGGGTGTTTGTCTTGCCTCGGTGCTTGCTTTTGCACCTTGCT
GTGAATCATGGTGCATTCGGAGTATATCAATTACTACCACAACTACTAGT
CAATGTCAGGAATTTTTCTTTCTTTCAGTTATCTCTTCTTACCAACTCGT
CAACCTCACCTACATCAACCGTTTCAACTCATGCGATTCGAAATCCGGTT
GAAAAAGAATCCCAATCAGCATGTACGCGTACCTAAGAAGTGAGAACCGA
TTACACATGTGGC back to topCoding sequence (CDS) from alignment at ch4:4719377..4723089+ >KJC3_006112-T1 ID=KJC3_006112-T1|Name=KJC3_006112-T1|organism=Aspergillus niger KJC3|type=CDS|length=5334bp|location=Sequence derived from alignment at ch4:4719377..4723089+ (Aspergillus niger KJC3)
ATGGGCAACGACAATAAATTCGAATATGAAGCCCTTCCAATCCCATCCTA
CGAAGAGGCCATCGGCGTTCGTCCAGGCTCGTCCCGATCGCACCTCGATT
CTTCCGAAGAAGTGAGCGACAACACCGAACGACAAGGCTTGCTCCAACGC
GGTCCCCAGACGGGTGCCCGCGGAGAGACTAGACCTCATGGATATCACCC
TCCCACCGTCGAGTCCGCTCGGAATAGCCTCGATGACCTCGAGTCCGGGT
CCGGATCGGATAGGGGCTCGCTCGAGGAGTTACAGCGGGAACTGGCTCAG
ATGGACGTGGAGGACGCTGGTCAGCAAACGTCATCTCAACGCTCTCGCCT
GCGGTCTCGGTTTTCGAAGCGATTCAACGATTTGACCCGTACATTATCCT
CGTTCAATCTACCGTTTCGCCGTTATTTGCCAAGATTGCCAGATTTCAGG
TTTACCATCCACCTAGACGAAGCTCGGTCGGGCTTAAAACACAATGGATG
CATGATCTTGTTACGTGTCTTTGGATTACTTCTGGTGGTCACCATCGTGT
ATATCTTCTTCATTTCGGACCTTTTCAGCATGAATAACCGTTTTATCATG
GGCCAATCTTACAGCGCCGCATCCGTCGAGAACTTCGTTCAGGGTCATAT
CAATGAGACCAGCATTGCAGAAAACCTGAAGAAGCTGACCGCATACCCTC
ATATTGCCGGTACGGAAGGCAGTTTTGTTCTGGCGGAATGGGTGGCATCG
GAGTTCAACAAGGCGAACTTCGACGAGGTCGAGATGGAAGAATTCCAGGT
CTACTTAAATTACCCCCAGCAAGACGGTCGGAGGGTAGCGATCATCGATC
CTCCCGACCTTACCTGGGTGGCTACTTTGGAGGAGGATAACGAGCAGACC
TTGGTATTCCATGGCCACTCGAAGTCGGGGAACGTCACTGGTCACCTCGT
CTATGCAAACTACGGCTCCCGAGAAGATTTCCAATACCTCAAAGATCAAG
GAGTTGCCTTGGACGGCTCCATAGCGCTGGTCCGTTATGGTGGGTCAGAG
AGCGATCGGGCCTTGAAGGTCAAAGCCGCAGAATTGGCTGGTGCAGCTGG
TTGTATAATATATTCCGATCCCGCAGAGGATGGCTTTGTCCGGGGCCCCG
CCTTTCCAGACGGACGCTATATGCCAGCAGACGGGACACAAAGAGGCGCT
GTCAGTTTGATGTCATGGGTGGTCGGTGATGTACTCTCGCCAGGTTTTGC
ATCGACACCGGATGAGAAAGTGAGACTCAAGCCAGAGGATAGCCGGGGAC
TGACGGCTATTCCTAGCATCCCTCTCGCCTGGCGCGATGCCCAAAGGCTC
TTGCAGGTGCTCAAGGGCCACGGTTCGAAGGTGCCAGCCAAGTGGGTTGG
TGGTGTTCCGGATGTGAACCAGTGGTGGACCGGGGATGCATCGTCGCCCA
CCGTCAACCTCATGAACATCCAAGATGAGGTAGAAAGACAGCCCATATAC
AACGTGGTTGGAAGGATCATCGGGTTGGAGCAGCCGGAGAAAAAGATTAT
TGTCGGTAACCACCGAGACTCGTGGTGCTTAGGAAGTGCGGATCCAGGTA
GTGGCACGGCTGTGTTTCTTGAGCTGGCTCGAGTTTTCGGGGAACTGCTG
ACATTTGGCTGGCGCCCACTACGCACCATCGAGTTTATTAGCTGGGACGC
TGAAGAGTACAACCTCGTTGGCTCGACGGAACACGTGGAAAAGGAATTGC
AAGCACTTCGTGAAAACGCATATGCCTACATCAACGTCGATGTTGGTGTA
AGCGGCAAAGAATTTGACGCCGCAGGAAGTCCGCTTTTCGAGAGCGTCAT
AATGCAGATACTCGGTCGCATATCGGATCCTGACAGCAATGAGACGCTCA
AAGATATTTGGGAGAAGAAGAAGAAGAGACTCGGACCTCTCGGTGCCGGA
AGCGACTACGTCGCTTTTCAAGACATCGCCGGAACTTCCAGTGTCGATTT
TGGATTCATCGGCGAACCTTTCCCCTACCACAGTTGCTATGAGAACTGGG
ACTGGATGACCAAATTTGGTGACCCCGGATTTCAATACCACAAGATCCTA
GGCCAGTTCTGGGGTCTGTTACTTCTCCAGCTTGCAGACAGCCCCATCCT
GCCTTTCGATTTGGAGGCATATGCGGCGCACGTTGGTGGCTACATTTCTG
GCCTGGAAAATTATGCCAAGTCAAGGAATGTCCCAATTGCCGATAACACA
CAGAACGCTGCTCGGGATACCTCTGTGACCTTCAAGCCCTTGTATGAAGC
CGCGGCGAAGTTCAAGGACGATGCGTCTCATTTTCAGGAGTGGGCTAGGG
TCTGGCACGATGCTGTTTGGGGAGCTGGTGGGTTTGAGAACAACGTTGTT
GCTGTTCAGCGGCTGGCACATAATACGCGGATGGCTCATTTCGAAACCCA
TCTTCTCGACGACAGGCCAGATGGCGGCGTCCCGAATCGCACGCAATTCA
AGCATGTCATCTTCGGCCCTGAACTTTGGTCCGGCTATGACCCTACTCTC
TTCCCTGCTATTCGCGACAGCATCGATTCTGGCAATTGGACGCTAACCCA
GGAGTGGATTGATCGGGTCTCCAATATCATCAGTGACGCGAGCGACCACC
TCGTCCATAAGAACTGAATGGGCAACGACAATAAATTCGAATATGAAGCC
CTTCCAATCCCATCCTACGAAGAGGCCATCGGCGTTCGTCCAGGCTCGTC
CCGATCGCACCTCGATTCTTCCGAAGAAGTGAGCGACAACACCGAACGAC
AAGGCTTGCTCCAACGCGGTCCCCAGACGGGTGCCCGCGGAGAGACTAGA
CCTCATGGATATCACCCTCCCACCGTCGAGTCCGCTCGGAATAGCCTCGA
TGACCTCGAGTCCGGGTCCGGATCGGATAGGGGCTCGCTCGAGGAGTTAC
AGCGGGAACTGGCTCAGATGGACGTGGAGGACGCTGGTCAGCAAACGTCA
TCTCAACGCTCTCGCCTGCGGTCTCGGTTTTCGAAGCGATTCAACGATTT
GACCCGTACATTATCCTCGTTCAATCTACCGTTTCGCCGTTATTTGCCAA
GATTGCCAGATTTCAGGTTTACCATCCACCTAGACGAAGCTCGGTCGGGC
TTAAAACACAATGGATGCATGATCTTGTTACGTGTCTTTGGATTACTTCT
GGTGGTCACCATCGTGTATATCTTCTTCATTTCGGACCTTTTCAGCATGA
ATAACCGTTTTATCATGGGCCAATCTTACAGCGCCGCATCCGTCGAGAAC
TTCGTTCAGGGTCATATCAATGAGACCAGCATTGCAGAAAACCTGAAGAA
GCTGACCGCATACCCTCATATTGCCGGTACGGAAGGCAGTTTTGTTCTGG
CGGAATGGGTGGCATCGGAGTTCAACAAGGCGAACTTCGACGAGGTCGAG
ATGGAAGAATTCCAGGTCTACTTAAATTACCCCCAGCAAGACGGTCGGAG
GGTAGCGATCATCGATCCTCCCGACCTTACCTGGGTGGCTACTTTGGAGG
AGGATAACGAGCAGACCTTGGTATTCCATGGCCACTCGAAGTCGGGGAAC
GTCACTGGTCACCTCGTCTATGCAAACTACGGCTCCCGAGAAGATTTCCA
ATACCTCAAAGATCAAGGAGTTGCCTTGGACGGCTCCATAGCGCTGGTCC
GTTATGGTGGGTCAGAGAGCGATCGGGCCTTGAAGGTCAAAGCCGCAGAA
TTGGCTGGTGCAGCTGGTTGTATAATATATTCCGATCCCGCAGAGGATGG
CTTTGTCCGGGGCCCCGCCTTTCCAGACGGACGCTATATGCCAGCAGACG
GGACACAAAGAGGCGCTGTCAGTTTGATGTCATGGGTGGTCGGTGATGTA
CTCTCGCCAGGTTTTGCATCGACACCGGATGAGAAAGTGAGACTCAAGCC
AGAGGATAGCCGGGGACTGACGGCTATTCCTAGCATCCCTCTCGCCTGGC
GCGATGCCCAAAGGCTCTTGCAGGTGCTCAAGGGCCACGGTTCGAAGGTG
CCAGCCAAGTGGGTTGGTGGTGTTCCGGATGTGAACCAGTGGTGGACCGG
GGATGCATCGTCGCCCACCGTCAACCTCATGAACATCCAAGATGAGGTAG
AAAGACAGCCCATATACAACGTGGTTGGAAGGATCATCGGGTTGGAGCAG
CCGGAGAAAAAGATTATTGTCGGTAACCACCGAGACTCGTGGTGCTTAGG
AAGTGCGGATCCAGGTAGTGGCACGGCTGTGTTTCTTGAGCTGGCTCGAG
TTTTCGGGGAACTGCTGACATTTGGCTGGCGCCCACTACGCACCATCGAG
TTTATTAGCTGGGACGCTGAAGAGTACAACCTCGTTGGCTCGACGGAACA
CGTGGAAAAGGAATTGCAAGCACTTCGTGAAAACGCATATGCCTACATCA
ACGTCGATGTTGGTGTAAGCGGCAAAGAATTTGACGCCGCAGGAAGTCCG
CTTTTCGAGAGCGTCATAATGCAGATACTCGGTCGCATATCGGATCCTGA
CAGCAATGAGACGCTCAAAGATATTTGGGAGAAGAAGAAGAAGAGACTCG
GACCTCTCGGTGCCGGAAGCGACTACGTCGCTTTTCAAGACATCGCCGGA
ACTTCCAGTGTCGATTTTGGATTCATCGGCGAACCTTTCCCCTACCACAG
TTGCTATGAGAACTGGGACTGGATGACCAAATTTGGTGACCCCGGATTTC
AATACCACAAGATCCTAGGCCAGTTCTGGGGTCTGTTACTTCTCCAGCTT
GCAGACAGCCCCATCCTGCCTTTCGATTTGGAGGCATATGCGGCGCACGT
TGGTGGCTACATTTCTGGCCTGGAAAATTATGCCAAGTCAAGGAATGTCC
CAATTGCCGATAACACACAGAACGCTGCTCGGGATACCTCTGTGACCTTC
AAGCCCTTGTATGAAGCCGCGGCGAAGTTCAAGGACGATGCGTCTCATTT
TCAGGAGTGGGCTAGGGTCTGGCACGATGCTGTTTGGGGAGCTGGTGGGT
TTGAGAACAACGTTGTTGCTGTTCAGCGGCTGGCACATAATACGCGGATG
GCTCATTTCGAAACCCATCTTCTCGACGACAGGCCAGATGGCGGCGTCCC
GAATCGCACGCAATTCAAGCATGTCATCTTCGGCCCTGAACTTTGGTCCG
GCTATGACCCTACTCTCTTCCCTGCTATTCGCGACAGCATCGATTCTGGC
AATTGGACGCTAACCCAGGAGTGGATTGATCGGGTCTCCAATATCATCAG
TGACGCGAGCGACCACCTCGTCCATAAGAACTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006112-T1.utr5p1 | KJC3_006112-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006112-T1.utr3p1 | KJC3_006112-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | MEROPS:MER0015691 |
| DBxref | InterPro:IPR036757 |
| DBxref | InterPro:IPR007365 |
| DBxref | InterPro:IPR003137 |
| DBxref | InterPro:IPR007484 |
| DBxref | PFAM:PF04253 |
| DBxref | PFAM:PF04389 |
| DBxref | PFAM:PF02225 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4719377..4723089 + |
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