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KJC3_006121-T1, KJC3_006121-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006121-T1
Unique NameKJC3_006121-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4753126..4754312-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006121-T1 ID=KJC3_006121-T1|Name=KJC3_006121-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1187bp|location=Sequence derived from alignment at ch4:4753126..4754312- (Aspergillus niger KJC3)
AGTTGATTCACCGCGGTGCCGCGGCCTCAGGCTGCCAGACTCGCTTGCCC
ACCCCTTGATCAATCTTAGCCAATCAGAATGTGAGCCGCCGTGGGTAGGG
CACACACCAGTCATTTTCTGTATCCAAGCCATTTGAGGCCTATCGACTTC
CTTTTTTCCTTCCTTTCCATATTCCATCCCACTACCCCAGCAAGTCGACA
AAATGGCTCCCAAGAAGACCGCCGGTGCTGCCAAGGAGAACGTCTCTCTC
GGTCCTTTGGCCGGAGATGGTATGTACAACCCAGTGCACGCTTCACGAAT
TATACGATTTGAGACCATGTCTAATCTGAGATTGAATTGCAGGCAAGCTC
GTTTTCGGTGTTGCCCGTATCTTTGCCTCCTTCAACGATACCTTCGTCCA
CGTCACCGATCTGAGGTTCGTCACATCTTAAAGTACCCGAATATCGACTG
CACGAAACTCCGACTTCCGTTCTCCGGTGAACATTTTGCGCCCCGCAATG
GACTAGGAGTCGGATATCGTGAATTGTCGCATAGGCTATGGCGCAGGATA
CAGTTGGCTAACTGATTGGGATAACAGTGGTCGCGAAACCATCTGCCGTG
TCACCGGTGGTATGAAGGTCAAGGCTGACCGTGACGAGTCTTCCCCCTAC
GCTGCCATGTTGGCTGCTCAGGATGTTGCTGCTCGCTGCAAGGAGCTTGG
CATCAACGCCCTCCACATCAAGATCCGTGCCACTGGTGGTATGTGAACGA
GCGCTATAACAGCACCAACTCTGGAGACAAAACTAATCTTCGATATAGGT
AACGGCACCAAGACCCCCGGTCCCGGTGCTCAGTCCGCCCTCCGTGCTCT
TGCCCGTTCCGGCATGAGAATCGGCCGTATCGAGGACGTCACCCCCACTC
CCTCCGACTCTACTCGTCGCAAGGGTGGTCGCCGTGGTCGTCGTTTGTAA
GCATGTGCGGGTTCACTTATTCCAAGTTGTGCGGAGCTTCTCTGCATGGT
TGGATTGGAGCGGACTTGGCCTTGCTTGCCGTATGTGGATGGAATAAACG
CGGAGAACGGCCTTTATCGCCTGGTCTTCAATTTATTACATACCCAAAAG
TGTGTCTTTCGGTTCTGGATTTAGGTAGTCTGCTGTCTTCGTGGCGGTTG
CTCTAGTCAATATAATGAACCTAGAACTGATATGGTC
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Coding sequence (CDS) from alignment at ch4:4753126..4754312-

>KJC3_006121-T1 ID=KJC3_006121-T1|Name=KJC3_006121-T1|organism=Aspergillus niger KJC3|type=CDS|length=1812bp|location=Sequence derived from alignment at ch4:4753126..4754312- (Aspergillus niger KJC3)
GTAACGGCACCAAGACCCCCGGTCCCGGTGCTCAGTCCGCCCTCCGTGCT
CTTGCCCGTTCCGGCATGAGAATCGGCCGTATCGAGGACGTCACCCCCAC
TCCCTCCGACTCTACTCGTCGCAAGGGTGGTCGCCGTGGTCGTCGTTTGT
AATGGTCGCGAAACCATCTGCCGTGTCACCGGTGGTATGAAGGTCAAGGC
TGACCGTGACGAGTCTTCCCCCTACGCTGCCATGTTGGCTGCTCAGGATG
TTGCTGCTCGCTGCAAGGAGCTTGGCATCAACGCCCTCCACATCAAGATC
CGTGCCACTGGTGGCAAGCTCGTTTTCGGTGTTGCCCGTATCTTTGCCTC
CTTCAACGATACCTTCGTCCACGTCACCGATCTGAGATGGCTCCCAAGAA
GACCGCCGGTGCTGCCAAGGAGAACGTCTCTCTCGGTCCTTTGGCCGGAG
ATGGTAACGGCACCAAGACCCCCGGTCCCGGTGCTCAGTCCGCCCTCCGT
GCTCTTGCCCGTTCCGGCATGAGAATCGGCCGTATCGAGGACGTCACCCC
CACTCCCTCCGACTCTACTCGTCGCAAGGGTGGTCGCCGTGGTCGTCGTT
TGTAATGGTCGCGAAACCATCTGCCGTGTCACCGGTGGTATGAAGGTCAA
GGCTGACCGTGACGAGTCTTCCCCCTACGCTGCCATGTTGGCTGCTCAGG
ATGTTGCTGCTCGCTGCAAGGAGCTTGGCATCAACGCCCTCCACATCAAG
ATCCGTGCCACTGGTGGCAAGCTCGTTTTCGGTGTTGCCCGTATCTTTGC
CTCCTTCAACGATACCTTCGTCCACGTCACCGATCTGAGATGGCTCCCAA
GAAGACCGCCGGTGCTGCCAAGGAGAACGTCTCTCTCGGTCCTTTGGCCG
GAGATGGTAACGGCACCAAGACCCCCGGTCCCGGTGCTCAGTCCGCCCTC
CGTGCTCTTGCCCGTTCCGGCATGAGAATCGGCCGTATCGAGGACGTCAC
CCCCACTCCCTCCGACTCTACTCGTCGCAAGGGTGGTCGCCGTGGTCGTC
GTTTGTAATGGTCGCGAAACCATCTGCCGTGTCACCGGTGGTATGAAGGT
CAAGGCTGACCGTGACGAGTCTTCCCCCTACGCTGCCATGTTGGCTGCTC
AGGATGTTGCTGCTCGCTGCAAGGAGCTTGGCATCAACGCCCTCCACATC
AAGATCCGTGCCACTGGTGGCAAGCTCGTTTTCGGTGTTGCCCGTATCTT
TGCCTCCTTCAACGATACCTTCGTCCACGTCACCGATCTGAGATGGCTCC
CAAGAAGACCGCCGGTGCTGCCAAGGAGAACGTCTCTCTCGGTCCTTTGG
CCGGAGATGGTAACGGCACCAAGACCCCCGGTCCCGGTGCTCAGTCCGCC
CTCCGTGCTCTTGCCCGTTCCGGCATGAGAATCGGCCGTATCGAGGACGT
CACCCCCACTCCCTCCGACTCTACTCGTCGCAAGGGTGGTCGCCGTGGTC
GTCGTTTGTAATGGTCGCGAAACCATCTGCCGTGTCACCGGTGGTATGAA
GGTCAAGGCTGACCGTGACGAGTCTTCCCCCTACGCTGCCATGTTGGCTG
CTCAGGATGTTGCTGCTCGCTGCAAGGAGCTTGGCATCAACGCCCTCCAC
ATCAAGATCCGTGCCACTGGTGGCAAGCTCGTTTTCGGTGTTGCCCGTAT
CTTTGCCTCCTTCAACGATACCTTCGTCCACGTCACCGATCTGAGATGGC
TCCCAAGAAGACCGCCGGTGCTGCCAAGGAGAACGTCTCTCTCGGTCCTT
TGGCCGGAGATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS14KJC3_006121Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006121-T1KJC3_006121-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006121-T1.cdsKJC3_006121-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006121-T1.utr3p1KJC3_006121-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006121-T1.exon4KJC3_006121-T1.exon4Aspergillus niger KJC3exon
KJC3_006121-T1.exon3KJC3_006121-T1.exon3Aspergillus niger KJC3exon
KJC3_006121-T1.exon2KJC3_006121-T1.exon2Aspergillus niger KJC3exon
KJC3_006121-T1.exon1KJC3_006121-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006121-T1.utr5p1KJC3_006121-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR018102
DBxrefInterPro:IPR001971
DBxrefInterPro:IPR036967
DBxrefPFAM:PF00411
Product S11
Productribosomal protein S14
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4753126..4754312 -
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