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KJC3_006127-T1, KJC3_006127-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006127-T1
Unique NameKJC3_006127-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4774596..4775592-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006127-T1 ID=KJC3_006127-T1|Name=KJC3_006127-T1|organism=Aspergillus niger KJC3|type=mRNA|length=997bp|location=Sequence derived from alignment at ch4:4774596..4775592- (Aspergillus niger KJC3)
ATGGCTTCCGTCCCGAGTGTGCAATGCTTCGGCAAGAAGAAGACGGGTGA
GTTTTCCTCTATAATTTTGGTGGTGATATAAATGGGGTGGATTTGAAGAT
TGGAGGTTTGGATGGGATATGGTGTGACTTGGGATGCTAACGGTTGATGT
GTTTTAGCCACCGCTGTCGCCCACTGCAAGGTATGGGAATTACATTCTCT
GTCTATCTATATCTCCTGGTCTAGGATTATCGTGTTGCGGATGCCGATGT
GTCGTTCGAATTGGTCAATATTGGTCTTGGAGGTTCGGAAGGATCTGGGT
ATCATTCGACATTTAAGGAGGATTATGAAGCTTGTGGATTGCCCGGAAGC
ACGGGGGAAGCGTTATCGAGTATCGAAACGAAGAACGACACGGCACAAGG
AAATTTTGAAGGAAGATCAATTACGTGAAGGGAAAAGTGAAGAAGACATG
CGCAACCAAACCGAACGACACATCTGCATCCGCACCGCATATATCAGATG
AACCAAATCGCAACGGAAAGAAGGAGAACGTCAAAACTGATTCGTTTTTT
TCCAACTACAGCAAGGCAAGGGCATGATCCGGGTCAACGGCCAGCCCCTC
TCTCTGGTCCAGCCTGAGATCCTCCGCTTCAAGGTACACTCACCTACCTG
TCGGGTTTTACGAAGTGCCATGGACGGGTAATTGACAGGATTATTCAATG
AAATAGGTCTACGAGCCCCTCCTGATCGTTGGAGCCGACAAGTTCGCCGG
TGTCGACATCCGCGTCCGCGTCTCCGGTGGTGGTCACACCTCCCAGGTTT
ACGCCATCCGTCAGGCCATCGCCAAGTCCATCGTCGCCTACTACCAGAAG
TACGTCGATGAGCACTCCAAGAACCAGCTGAAGCAGGCTCTTGTCCAGTA
CGACCGCACACTCCTCGTCGCCGACAACCGTCGTACGGAGCCCAAGAAGT
TCGGTGGTCGTGGTGCCCGCGCTCGCTACCAGAAGTCCTACCGTTAA
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Coding sequence (CDS) from alignment at ch4:4774596..4775592-

>KJC3_006127-T1 ID=KJC3_006127-T1|Name=KJC3_006127-T1|organism=Aspergillus niger KJC3|type=CDS|length=1728bp|location=Sequence derived from alignment at ch4:4774596..4775592- (Aspergillus niger KJC3)
GTCTACGAGCCCCTCCTGATCGTTGGAGCCGACAAGTTCGCCGGTGTCGA
CATCCGCGTCCGCGTCTCCGGTGGTGGTCACACCTCCCAGGTTTACGCCA
TCCGTCAGGCCATCGCCAAGTCCATCGTCGCCTACTACCAGAAGTACGTC
GATGAGCACTCCAAGAACCAGCTGAAGCAGGCTCTTGTCCAGTACGACCG
CACACTCCTCGTCGCCGACAACCGTCGTACGGAGCCCAAGAAGTTCGGTG
GTCGTGGTGCCCGCGCTCGCTACCAGAAGTCCTACCGTTAACAAGGCAAG
GGCATGATCCGGGTCAACGGCCAGCCCCTCTCTCTGGTCCAGCCTGAGAT
CCTCCGCTTCAAGCCACCGCTGTCGCCCACTGCAAGATGGCTTCCGTCCC
GAGTGTGCAATGCTTCGGCAAGAAGAAGACGGGTCTACGAGCCCCTCCTG
ATCGTTGGAGCCGACAAGTTCGCCGGTGTCGACATCCGCGTCCGCGTCTC
CGGTGGTGGTCACACCTCCCAGGTTTACGCCATCCGTCAGGCCATCGCCA
AGTCCATCGTCGCCTACTACCAGAAGTACGTCGATGAGCACTCCAAGAAC
CAGCTGAAGCAGGCTCTTGTCCAGTACGACCGCACACTCCTCGTCGCCGA
CAACCGTCGTACGGAGCCCAAGAAGTTCGGTGGTCGTGGTGCCCGCGCTC
GCTACCAGAAGTCCTACCGTTAACAAGGCAAGGGCATGATCCGGGTCAAC
GGCCAGCCCCTCTCTCTGGTCCAGCCTGAGATCCTCCGCTTCAAGCCACC
GCTGTCGCCCACTGCAAGATGGCTTCCGTCCCGAGTGTGCAATGCTTCGG
CAAGAAGAAGACGGGTCTACGAGCCCCTCCTGATCGTTGGAGCCGACAAG
TTCGCCGGTGTCGACATCCGCGTCCGCGTCTCCGGTGGTGGTCACACCTC
CCAGGTTTACGCCATCCGTCAGGCCATCGCCAAGTCCATCGTCGCCTACT
ACCAGAAGTACGTCGATGAGCACTCCAAGAACCAGCTGAAGCAGGCTCTT
GTCCAGTACGACCGCACACTCCTCGTCGCCGACAACCGTCGTACGGAGCC
CAAGAAGTTCGGTGGTCGTGGTGCCCGCGCTCGCTACCAGAAGTCCTACC
GTTAACAAGGCAAGGGCATGATCCGGGTCAACGGCCAGCCCCTCTCTCTG
GTCCAGCCTGAGATCCTCCGCTTCAAGCCACCGCTGTCGCCCACTGCAAG
ATGGCTTCCGTCCCGAGTGTGCAATGCTTCGGCAAGAAGAAGACGGGTCT
ACGAGCCCCTCCTGATCGTTGGAGCCGACAAGTTCGCCGGTGTCGACATC
CGCGTCCGCGTCTCCGGTGGTGGTCACACCTCCCAGGTTTACGCCATCCG
TCAGGCCATCGCCAAGTCCATCGTCGCCTACTACCAGAAGTACGTCGATG
AGCACTCCAAGAACCAGCTGAAGCAGGCTCTTGTCCAGTACGACCGCACA
CTCCTCGTCGCCGACAACCGTCGTACGGAGCCCAAGAAGTTCGGTGGTCG
TGGTGCCCGCGCTCGCTACCAGAAGTCCTACCGTTAACAAGGCAAGGGCA
TGATCCGGGTCAACGGCCAGCCCCTCTCTCTGGTCCAGCCTGAGATCCTC
CGCTTCAAGCCACCGCTGTCGCCCACTGCAAGATGGCTTCCGTCCCGAGT
GTGCAATGCTTCGGCAAGAAGAAGACGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006127KJC3_006127Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006127-T1KJC3_006127-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006127-T1.cdsKJC3_006127-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006127-T1.exon4KJC3_006127-T1.exon4Aspergillus niger KJC3exon
KJC3_006127-T1.exon3KJC3_006127-T1.exon3Aspergillus niger KJC3exon
KJC3_006127-T1.exon2KJC3_006127-T1.exon2Aspergillus niger KJC3exon
KJC3_006127-T1.exon1KJC3_006127-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR020568
DBxrefInterPro:IPR020574
DBxrefInterPro:IPR000754
DBxrefInterPro:IPR014721
DBxrefPFAM:PF00380
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4774596..4775592 -
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