|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4775940..4776696+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006128-T1 ID=KJC3_006128-T1|Name=KJC3_006128-T1|organism=Aspergillus niger KJC3|type=mRNA|length=757bp|location=Sequence derived from alignment at ch4:4775940..4776696+ (Aspergillus niger KJC3)
ATGTCGCAGACTGTTGGAAAGGTATACTTTTCCCCCTTTCCTTTTCCTTC
AAACTTCCCCTTCTTCTCTTCTTATCCATCCATTGTTGCTTTCCTTCTGC
ATCTATTCAATGTCTAACTTGATATCAAAAATAATCCCATATAGACCCGT
CTCGCCTTCTCCCGAACATGGCACTACGTCGACGTCGGCAGCGACCCTCG
CAGTCTGGGTAGACTCGCCTCCTCTATTGCCCTCACCCTCATGGGCAAGA
ACAAGCCCGTCTATGACCCCTCCACGGATTGTGGTGACTATGTCGTCGCC
GTCGGCTGCCACGACCTCCGCGTCACCGGCAAGAAGCGCTTCCAGAAGAA
GTACTACACTCACAACACCCGCCCCGGTAGTCTGCGGAGCATGACTATGG
ACATGATGTTTGAGAAATGGGGCGGTGGCGAGGTTCTCCGTCGTGCTGTT
CGCGGCATGTTGCCCAAGAATCGCTTGCGGGATAAGCGCTTGGCTAGGCT
GAAGAGTGAGTATACCTTCTCTTAAGTTATATTGATATCAATTGGATATA
TATTTGTTTGCCTCCTAGTTCTGGGGGAGGCTTGGGGCATATGTTATGTC
GTTTGAGAAGGGTGTATGCTAATAACATTGTTGTATAGCTTTCGAAGGTC
TCGCGCACCCCTACAAGGAGAACATCGTCAAGCTCAACGGACAGTCGGTC
ATTGGGAACTTGCCCGAGGTGAAGGAAGCGTTTAAGGCGGCTAAGACGGA
TGCGTAA back to topCoding sequence (CDS) from alignment at ch4:4775940..4776696+ >KJC3_006128-T1 ID=KJC3_006128-T1|Name=KJC3_006128-T1|organism=Aspergillus niger KJC3|type=CDS|length=1503bp|location=Sequence derived from alignment at ch4:4775940..4776696+ (Aspergillus niger KJC3)
ATGTCGCAGACTGTTGGAAAGACCCGTCTCGCCTTCTCCCGAACATGGCA
CTACGTCGACGTCGGCAGCGACCCTCGCAGTCTGGGTAGACTCGCCTCCT
CTATTGCCCTCACCCTCATGGGCAAGAACAAGCCCGTCTATGACCCCTCC
ACGGATTGTGGTGACTATGTCGTCGCCGTCGGCTGCCACGACCTCCGCGT
CACCGGCAAGAAGCGCTTCCAGAAGAAGTACTACACTCACAACACCCGCC
CCGGTAGTCTGCGGAGCATGACTATGGACATGATGTTTGAGAAATGGGGC
GGTGGCGAGGTTCTCCGTCGTGCTGTTCGCGGCATGTTGCCCAAGAATCG
CTTGCGGGATAAGCGCTTGGCTAGGCTGAAGACTTTCGAAGGTCTCGCGC
ACCCCTACAAGGAGAACATCGTCAAGCTCAACGGACAGTCGGTCATTGGG
AACTTGCCCGAGGTGAAGGAAGCGTTTAAGGCGGCTAAGACGGATGCGTA
AATGTCGCAGACTGTTGGAAAGACCCGTCTCGCCTTCTCCCGAACATGGC
ACTACGTCGACGTCGGCAGCGACCCTCGCAGTCTGGGTAGACTCGCCTCC
TCTATTGCCCTCACCCTCATGGGCAAGAACAAGCCCGTCTATGACCCCTC
CACGGATTGTGGTGACTATGTCGTCGCCGTCGGCTGCCACGACCTCCGCG
TCACCGGCAAGAAGCGCTTCCAGAAGAAGTACTACACTCACAACACCCGC
CCCGGTAGTCTGCGGAGCATGACTATGGACATGATGTTTGAGAAATGGGG
CGGTGGCGAGGTTCTCCGTCGTGCTGTTCGCGGCATGTTGCCCAAGAATC
GCTTGCGGGATAAGCGCTTGGCTAGGCTGAAGACTTTCGAAGGTCTCGCG
CACCCCTACAAGGAGAACATCGTCAAGCTCAACGGACAGTCGGTCATTGG
GAACTTGCCCGAGGTGAAGGAAGCGTTTAAGGCGGCTAAGACGGATGCGT
AAATGTCGCAGACTGTTGGAAAGACCCGTCTCGCCTTCTCCCGAACATGG
CACTACGTCGACGTCGGCAGCGACCCTCGCAGTCTGGGTAGACTCGCCTC
CTCTATTGCCCTCACCCTCATGGGCAAGAACAAGCCCGTCTATGACCCCT
CCACGGATTGTGGTGACTATGTCGTCGCCGTCGGCTGCCACGACCTCCGC
GTCACCGGCAAGAAGCGCTTCCAGAAGAAGTACTACACTCACAACACCCG
CCCCGGTAGTCTGCGGAGCATGACTATGGACATGATGTTTGAGAAATGGG
GCGGTGGCGAGGTTCTCCGTCGTGCTGTTCGCGGCATGTTGCCCAAGAAT
CGCTTGCGGGATAAGCGCTTGGCTAGGCTGAAGACTTTCGAAGGTCTCGC
GCACCCCTACAAGGAGAACATCGTCAAGCTCAACGGACAGTCGGTCATTG
GGAACTTGCCCGAGGTGAAGGAAGCGTTTAAGGCGGCTAAGACGGATGCG
TAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092654LJ |
| DBxref | InterPro:IPR036899 |
| DBxref | InterPro:IPR005823 |
| DBxref | InterPro:IPR005822 |
| DBxref | PFAM:PF00572 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4775940..4776696 + |
|
