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KJC3_006134-T1, KJC3_006134-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006134-T1
Unique NameKJC3_006134-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4797565..4801051-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006134-T1 ID=KJC3_006134-T1|Name=KJC3_006134-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3487bp|location=Sequence derived from alignment at ch4:4797565..4801051- (Aspergillus niger KJC3)
CCTTGGACAGTTACGTCTACGCATAAACACTTTTGCGGCTATTGTTTGAG
CTTGATCGTTTATTCCAAAGACTTCTGCCACAGGACCAGTCAGGAGCTAG
TCATTCTATCTCTAGCGCCGGACTACAGGAACGCAATTGCAGCACCATTC
GCGTGCTGCGCAACGCATTTCCAAGTCACCTATCGCTGATAATCCCGGAA
TAGTCATTTAATTCAGTTCCTCGAGCCACCATGGACCTTTGCCAGAATGT
GTGAATGATCTGGGTCGAAAAGCTTTGGGGCTGCCATTCGCGGTGAACTT
CCCACTGGATGATAAGAGGCCAATGAGGATACTGGAATCAAATGCAAGGT
ATAAGTGGCTCCCGTGATATCTATACATGTTGTATGCGGGGACTGATCCA
GGAGTCTATGCTTCGTCTAGGGACCACCGATGAGCAAGCATCATGTAGAC
ACACTGTAGCTACGATGAGATGCTGATAATCAACGACACCAACCCCGCTA
CTCTCATAAAGGCAGGTATAGCCTGCCAAATCAGCGATGAGCGACTCGAT
TGGTATAAGCCAATTGTTTCCCACAATGACAGGTCATAATTTCAAGCAGC
TCCAGATGCTGCCGTCCGTCTTATCATCGACCCGTTAGAACCACTCTGAT
ATTCGCTCGATGCTTATCATCCGGCAGTCAAAGCACCCAATAGCCAACCA
GTTGCCTCCGATAAGCCCGAGTGGATGGATTCCCCAGCTTCTGGGTCATT
GCTCTAGCGTCAAGTTCAAGGGGTTCTCCAAGTTCTGTCTTCGCTCGCAG
CGCCTGAAGTTTCCTAGCCAAGTATGGTGCATGCCAAGCTTCAAGGTCTC
TGACCAGCAAGGAGCTGCATCCTATCTCGTTTCCATCCTTAGCGAGTCAT
CCTACTCGTTCCTGCTGGTTGACTGCAAGTGATGGTCTCTCTTTCGGGTC
ATCCAGTGAGATCGTGACCAGCTGCCAAGCGTATCAGCGCTCGATCCCCG
CTTCGCTTGCGCCCAGCTTTGAAGGTACCTGAGTTCCTTAAGGCGTTTAT
CGTGTTTCGCCGGCATGCCACCTATCTTACTCAAGGCTTTGGCTATCATT
TTCAACACTTTGCAGGACGGGACATGTCGTGTGCAGATAAGATGGCTGTC
TTGATTTTCCGAAGGCCACACATATATGTACTGGCGCATGACCCTGTGTG
TCCCGCAGCCACTCTATGACTTATCTTTTAACCACCTGTGTCTTGGACAC
TTATACTGCTTAAACATTTGTCTGAGAAAAACAAATGAAAGTTTGTGTCT
GAGCTAGCAAACGCTGCGTCTTTGCGTTGCTTGCTTTTTCCTCCTTCCAC
CTTACTTCCTACCCCGCCGCTCCCACTCTCCAGCAGCAGCTTACTGTGTA
CATATCGCCTCTTCTTATATAGTATATATGAGACCTCCATAATGTCTGGC
ACGGGCAATCACAAGGCTGTCTCCAAAGGAGCAGTGTTCGCGGACGTCGA
TCATGACCCCGTCACGACCGTACTGCCGCAAGGCGACATCCCTTATACCG
ATCATGCGATGGATGCGGACGAGAGGGTCATTGTGGCCCTGGGGTACAAG
CAAGAATTTAAGCGTGAATTTTCGCTATGGACAACATTTTGCGTCAGCTT
TTCGGTACTCGGGTTGCTTCCATCATTTGCAAGCACGATATACTACGGTA
GCTGTTCCTGGACCCTTTGATACAACGGGTAGGGCTGACGTCCACAAAGG
AATGGGCTATGCAGGAACGGCTGGTATGGTCTGGGGCTGGATCATCGCGA
TGGTTTTCATTCAGTGCGTCGCCATGTCCATGGCTGAGCTATGTTCCGCG
ATGCCTACAAGGTAAACCTTGCCTCATCGCCTGATATAGGAGAATATGAC
TGACTTTGGCAGTGGTGGTCTTTACTACGCCGCAGCAGTCCTTGCACCTC
CAAAATATGGGCCTTTTGCCGCTTGGATCACAGGATGGTCGAACTGGATC
GGGCAGATCACCGCAGCGCCATCTGTGGATTACGCGCTTTCTGCAATGAT
CCTCGCCGCTGCATCAATGCAGAATCCAGATTATGTCCCCACTAACTGGC
AGGTTTATCTCCTGACAGTGCTCGTTCTCATCATCCATACGGCCATCAGC
AGCATGCCCACCATATGGGTCGCCCGAGTCAACTCCTGGGGCTCAACGTT
CAACATCATCGCCCTCATCATTACCCTCATCGCTATTCCTGCTGGAACTA
CGAATGAGCCCAAGTTTTCCTCGTCTAGGGACGTTTGGGGCACCATCACC
AACCTCACCGACTTCCCCGATGGTGTGGCCGTTCTGATGACTTTCGTCGG
CGTCATCTGGACCATGTCTGGCTACGATTCGCCATTTCATCTAAGCGAGG
AATGCTCCAATGCCAATGTCGCCTCGCCGCGTGCGATCGTAATGACCTCG
GGGGCTGGCGGCTTGCTGGGATGGTTCCTGCAGTTAGTCGTCGCTTACAC
AGTCACCGACATCGACGCAGTCATAAACTCGGACTTGGGCCAGCCCTGGG
CCTCGTACTTGCTCCAGGTCTTGCCACGCAAGACTGCTTTGGCCCTCCTA
GCCCTCACCATTATCAGCGGTTTCTCCATGGGACAGGGCTGCATGGTGGC
TGCCTCACGAGTAACCTACGCCTACGCACGGGATGACTGCTTCCCACTAT
CCAAATACTGGAAGATGGTCAACACGCGCACCCAGACCCCTGTCAATGCG
GTGATCCTCAACGGCGTCCTGGGAATCCTCATGTGTCTGCTGGTTCTAGC
TGGCGATACAGCCATCGGAGCTTTATTCTCTATTGGCGGCATCGCTCAGT
TTGTCGCTTTTGCCATTCCCATCGCGATTCGGGTGTTCTTTGTTGGTCAC
CGGTTCCGGAAAGGTCCGTGGCATCTGGGCCCATTTGGACCCTGGATTGG
GGGAATGGGTGTGGCGTTCGTGCTTCTCATGGTGCCCGTGCTCTGTCTGC
CCAGTGTCACCGGCTCTGATCTGACACCGGATCTGATGAACTGGACGTGT
CTGGTCTGGGGAGCGCCGATGCTGGGGGTAACTATCTGGTGGGTTGTGGA
TGCGCACAAGTGGTTCACGGGACCCAAGGTCAATGTGGAGCACGCAATCC
ACGCTGCGGATGCGACTGTTATAGATGGCGTGGGAGCAGATGAGATTGTA
GTGCAAGACGATGCGTCGAGCAAGGCATCTGCGAGGTAGTTGCCTCACTA
CTCTGTTCAGGTTACGTTCATTCTAATGTTTGGCTACAGTCGTCCACAGA
CGCCGCATACAGTCTTGTAAATTATCCGACACTGCGTCCATATACTGCTA
ATTAGTATTGTATCTCTGAAATTTGTATGGCCTCACGCATTCATCTCCCA
AACAACCAACCTTGTCAGTGAGGGAATCGAGTAGGAAAGCATATAAGCAC
ACCCTTAAGCTGTTTGTGGTGAAATGGAAGAATATTG
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Coding sequence (CDS) from alignment at ch4:4797565..4801051-

>KJC3_006134-T1 ID=KJC3_006134-T1|Name=KJC3_006134-T1|organism=Aspergillus niger KJC3|type=CDS|length=5085bp|location=Sequence derived from alignment at ch4:4797565..4801051- (Aspergillus niger KJC3)
TGGTGGTCTTTACTACGCCGCAGCAGTCCTTGCACCTCCAAAATATGGGC
CTTTTGCCGCTTGGATCACAGGATGGTCGAACTGGATCGGGCAGATCACC
GCAGCGCCATCTGTGGATTACGCGCTTTCTGCAATGATCCTCGCCGCTGC
ATCAATGCAGAATCCAGATTATGTCCCCACTAACTGGCAGGTTTATCTCC
TGACAGTGCTCGTTCTCATCATCCATACGGCCATCAGCAGCATGCCCACC
ATATGGGTCGCCCGAGTCAACTCCTGGGGCTCAACGTTCAACATCATCGC
CCTCATCATTACCCTCATCGCTATTCCTGCTGGAACTACGAATGAGCCCA
AGTTTTCCTCGTCTAGGGACGTTTGGGGCACCATCACCAACCTCACCGAC
TTCCCCGATGGTGTGGCCGTTCTGATGACTTTCGTCGGCGTCATCTGGAC
CATGTCTGGCTACGATTCGCCATTTCATCTAAGCGAGGAATGCTCCAATG
CCAATGTCGCCTCGCCGCGTGCGATCGTAATGACCTCGGGGGCTGGCGGC
TTGCTGGGATGGTTCCTGCAGTTAGTCGTCGCTTACACAGTCACCGACAT
CGACGCAGTCATAAACTCGGACTTGGGCCAGCCCTGGGCCTCGTACTTGC
TCCAGGTCTTGCCACGCAAGACTGCTTTGGCCCTCCTAGCCCTCACCATT
ATCAGCGGTTTCTCCATGGGACAGGGCTGCATGGTGGCTGCCTCACGAGT
AACCTACGCCTACGCACGGGATGACTGCTTCCCACTATCCAAATACTGGA
AGATGGTCAACACGCGCACCCAGACCCCTGTCAATGCGGTGATCCTCAAC
GGCGTCCTGGGAATCCTCATGTGTCTGCTGGTTCTAGCTGGCGATACAGC
CATCGGAGCTTTATTCTCTATTGGCGGCATCGCTCAGTTTGTCGCTTTTG
CCATTCCCATCGCGATTCGGGTGTTCTTTGTTGGTCACCGGTTCCGGAAA
GGTCCGTGGCATCTGGGCCCATTTGGACCCTGGATTGGGGGAATGGGTGT
GGCGTTCGTGCTTCTCATGGTGCCCGTGCTCTGTCTGCCCAGTGTCACCG
GCTCTGATCTGACACCGGATCTGATGAACTGGACGTGTCTGGTCTGGGGA
GCGCCGATGCTGGGGGTAACTATCTGGTGGGTTGTGGATGCGCACAAGTG
GTTCACGGGACCCAAGGTCAATGTGGAGCACGCAATCCACGCTGCGGATG
CGACTGTTATAGATGGCGTGGGAGCAGATGAGATTGTAGTGCAAGACGAT
GCGTCGAGCAAGGCATCTGCGAGGTAGGAATGGGCTATGCAGGAACGGCT
GGTATGGTCTGGGGCTGGATCATCGCGATGGTTTTCATTCAGTGCGTCGC
CATGTCCATGGCTGAGCTATGTTCCGCGATGCCTACAAGATGTCTGGCAC
GGGCAATCACAAGGCTGTCTCCAAAGGAGCAGTGTTCGCGGACGTCGATC
ATGACCCCGTCACGACCGTACTGCCGCAAGGCGACATCCCTTATACCGAT
CATGCGATGGATGCGGACGAGAGGGTCATTGTGGCCCTGGGGTACAAGCA
AGAATTTAAGCGTGAATTTTCGCTATGGACAACATTTTGCGTCAGCTTTT
CGGTACTCGGGTTGCTTCCATCATTTGCAAGCACGATATACTACGTGGTG
GTCTTTACTACGCCGCAGCAGTCCTTGCACCTCCAAAATATGGGCCTTTT
GCCGCTTGGATCACAGGATGGTCGAACTGGATCGGGCAGATCACCGCAGC
GCCATCTGTGGATTACGCGCTTTCTGCAATGATCCTCGCCGCTGCATCAA
TGCAGAATCCAGATTATGTCCCCACTAACTGGCAGGTTTATCTCCTGACA
GTGCTCGTTCTCATCATCCATACGGCCATCAGCAGCATGCCCACCATATG
GGTCGCCCGAGTCAACTCCTGGGGCTCAACGTTCAACATCATCGCCCTCA
TCATTACCCTCATCGCTATTCCTGCTGGAACTACGAATGAGCCCAAGTTT
TCCTCGTCTAGGGACGTTTGGGGCACCATCACCAACCTCACCGACTTCCC
CGATGGTGTGGCCGTTCTGATGACTTTCGTCGGCGTCATCTGGACCATGT
CTGGCTACGATTCGCCATTTCATCTAAGCGAGGAATGCTCCAATGCCAAT
GTCGCCTCGCCGCGTGCGATCGTAATGACCTCGGGGGCTGGCGGCTTGCT
GGGATGGTTCCTGCAGTTAGTCGTCGCTTACACAGTCACCGACATCGACG
CAGTCATAAACTCGGACTTGGGCCAGCCCTGGGCCTCGTACTTGCTCCAG
GTCTTGCCACGCAAGACTGCTTTGGCCCTCCTAGCCCTCACCATTATCAG
CGGTTTCTCCATGGGACAGGGCTGCATGGTGGCTGCCTCACGAGTAACCT
ACGCCTACGCACGGGATGACTGCTTCCCACTATCCAAATACTGGAAGATG
GTCAACACGCGCACCCAGACCCCTGTCAATGCGGTGATCCTCAACGGCGT
CCTGGGAATCCTCATGTGTCTGCTGGTTCTAGCTGGCGATACAGCCATCG
GAGCTTTATTCTCTATTGGCGGCATCGCTCAGTTTGTCGCTTTTGCCATT
CCCATCGCGATTCGGGTGTTCTTTGTTGGTCACCGGTTCCGGAAAGGTCC
GTGGCATCTGGGCCCATTTGGACCCTGGATTGGGGGAATGGGTGTGGCGT
TCGTGCTTCTCATGGTGCCCGTGCTCTGTCTGCCCAGTGTCACCGGCTCT
GATCTGACACCGGATCTGATGAACTGGACGTGTCTGGTCTGGGGAGCGCC
GATGCTGGGGGTAACTATCTGGTGGGTTGTGGATGCGCACAAGTGGTTCA
CGGGACCCAAGGTCAATGTGGAGCACGCAATCCACGCTGCGGATGCGACT
GTTATAGATGGCGTGGGAGCAGATGAGATTGTAGTGCAAGACGATGCGTC
GAGCAAGGCATCTGCGAGGTAGGAATGGGCTATGCAGGAACGGCTGGTAT
GGTCTGGGGCTGGATCATCGCGATGGTTTTCATTCAGTGCGTCGCCATGT
CCATGGCTGAGCTATGTTCCGCGATGCCTACAAGATGTCTGGCACGGGCA
ATCACAAGGCTGTCTCCAAAGGAGCAGTGTTCGCGGACGTCGATCATGAC
CCCGTCACGACCGTACTGCCGCAAGGCGACATCCCTTATACCGATCATGC
GATGGATGCGGACGAGAGGGTCATTGTGGCCCTGGGGTACAAGCAAGAAT
TTAAGCGTGAATTTTCGCTATGGACAACATTTTGCGTCAGCTTTTCGGTA
CTCGGGTTGCTTCCATCATTTGCAAGCACGATATACTACGTGGTGGTCTT
TACTACGCCGCAGCAGTCCTTGCACCTCCAAAATATGGGCCTTTTGCCGC
TTGGATCACAGGATGGTCGAACTGGATCGGGCAGATCACCGCAGCGCCAT
CTGTGGATTACGCGCTTTCTGCAATGATCCTCGCCGCTGCATCAATGCAG
AATCCAGATTATGTCCCCACTAACTGGCAGGTTTATCTCCTGACAGTGCT
CGTTCTCATCATCCATACGGCCATCAGCAGCATGCCCACCATATGGGTCG
CCCGAGTCAACTCCTGGGGCTCAACGTTCAACATCATCGCCCTCATCATT
ACCCTCATCGCTATTCCTGCTGGAACTACGAATGAGCCCAAGTTTTCCTC
GTCTAGGGACGTTTGGGGCACCATCACCAACCTCACCGACTTCCCCGATG
GTGTGGCCGTTCTGATGACTTTCGTCGGCGTCATCTGGACCATGTCTGGC
TACGATTCGCCATTTCATCTAAGCGAGGAATGCTCCAATGCCAATGTCGC
CTCGCCGCGTGCGATCGTAATGACCTCGGGGGCTGGCGGCTTGCTGGGAT
GGTTCCTGCAGTTAGTCGTCGCTTACACAGTCACCGACATCGACGCAGTC
ATAAACTCGGACTTGGGCCAGCCCTGGGCCTCGTACTTGCTCCAGGTCTT
GCCACGCAAGACTGCTTTGGCCCTCCTAGCCCTCACCATTATCAGCGGTT
TCTCCATGGGACAGGGCTGCATGGTGGCTGCCTCACGAGTAACCTACGCC
TACGCACGGGATGACTGCTTCCCACTATCCAAATACTGGAAGATGGTCAA
CACGCGCACCCAGACCCCTGTCAATGCGGTGATCCTCAACGGCGTCCTGG
GAATCCTCATGTGTCTGCTGGTTCTAGCTGGCGATACAGCCATCGGAGCT
TTATTCTCTATTGGCGGCATCGCTCAGTTTGTCGCTTTTGCCATTCCCAT
CGCGATTCGGGTGTTCTTTGTTGGTCACCGGTTCCGGAAAGGTCCGTGGC
ATCTGGGCCCATTTGGACCCTGGATTGGGGGAATGGGTGTGGCGTTCGTG
CTTCTCATGGTGCCCGTGCTCTGTCTGCCCAGTGTCACCGGCTCTGATCT
GACACCGGATCTGATGAACTGGACGTGTCTGGTCTGGGGAGCGCCGATGC
TGGGGGTAACTATCTGGTGGGTTGTGGATGCGCACAAGTGGTTCACGGGA
CCCAAGGTCAATGTGGAGCACGCAATCCACGCTGCGGATGCGACTGTTAT
AGATGGCGTGGGAGCAGATGAGATTGTAGTGCAAGACGATGCGTCGAGCA
AGGCATCTGCGAGGTAGGAATGGGCTATGCAGGAACGGCTGGTATGGTCT
GGGGCTGGATCATCGCGATGGTTTTCATTCAGTGCGTCGCCATGTCCATG
GCTGAGCTATGTTCCGCGATGCCTACAAGATGTCTGGCACGGGCAATCAC
AAGGCTGTCTCCAAAGGAGCAGTGTTCGCGGACGTCGATCATGACCCCGT
CACGACCGTACTGCCGCAAGGCGACATCCCTTATACCGATCATGCGATGG
ATGCGGACGAGAGGGTCATTGTGGCCCTGGGGTACAAGCAAGAATTTAAG
CGTGAATTTTCGCTATGGACAACATTTTGCGTCAGCTTTTCGGTACTCGG
GTTGCTTCCATCATTTGCAAGCACGATATACTACG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006134KJC3_006134Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006134-T1KJC3_006134-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006134-T1.cdsKJC3_006134-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006134-T1.utr3p1KJC3_006134-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006134-T1.exon5KJC3_006134-T1.exon5Aspergillus niger KJC3exon
KJC3_006134-T1.exon4KJC3_006134-T1.exon4Aspergillus niger KJC3exon
KJC3_006134-T1.exon3KJC3_006134-T1.exon3Aspergillus niger KJC3exon
KJC3_006134-T1.exon2KJC3_006134-T1.exon2Aspergillus niger KJC3exon
KJC3_006134-T1.exon1KJC3_006134-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006134-T1.utr5p3KJC3_006134-T1.utr5p3Aspergillus niger KJC3five_prime_UTR
KJC3_006134-T1.utr5p2KJC3_006134-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_006134-T1.utr5p1KJC3_006134-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR002293
DBxrefPFAM:PF13520
DBxrefPFAM:PF00324
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4797565..4801051 -
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