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KJC3_006160-T2, KJC3_006160-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006160-T2
Unique NameKJC3_006160-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4873422..4875901+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006160-T2 ID=KJC3_006160-T2|Name=KJC3_006160-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2480bp|location=Sequence derived from alignment at ch4:4873422..4875901+ (Aspergillus niger KJC3)
CCAGCATAGAGCCATGATTGCACCTTGCAGCTCAATTATGGGTACCACCT
CATCGTGCTAACTTTATTAACGAACTACTTACCTAGTTTGGTGATTACTC
AGTGAATCCCCGTTAACCTCGGTGTTAAGCAGCAGCTTCTCCTCACCAGT
TCGGACTTGCCCCCGAGCCTGTCTTTATTAAGCCGGCTTTATCAATCTAT
CCCCGAATTCCTGTATCCCCCTTCTTTTACTCCGCATTGCTCTCGTTCAT
CTCCGGACTTTCACCATTGCTTGCTCATTACATACCATTGTTGATCGATT
GCGACGATGTGAGTAATTGCCTTCTCTCAATACCGCTTTTTCTGCCTGTT
TCATAGTCACTGACAGTCCTCAGGGTCTACACAGCATCCTTTGCCTTCTT
CGAGGCACTCTGGGAGGTACGGCCCCCGTCGACAATGAAATGTGGGTCAA
GCTAACCTTCCAGGCTGGTGTCTCCCATGTCTTTGTCAATCTGGGCTCCG
ACCACCCCTCCATCCTCGAGGCTATGGTCAAGGGCCAGAAAGAAAAGCCC
AATGCTTTCCCTAAGATCATAACTTGTCCCAACGAGGTGAGCCGATCAAT
GCAATCTCGTTGTGGATCTCGCCCGACACTAACCCCGCATGCGTCCTTGG
CAGATGGTGGCCCTGTCTATGGCCGACGGTTATGCTCGCTTGACTGGGGA
ACCTCAATGCGTGATTGTTCATGTCGATGTCGGCACCCAGGGGCTCGCTG
CCGCTATCCACAACGCCTCTTGTGGCCGAGCCCCCGTCTTGATCTTCGCC
GGTCTCTCCCCCTATACGATTGAGGGGGAGATGCGTGGCTCGCGCACTGA
ATACATTCATTGGATCCAAGATGTTCCCGACCAGAAGCAGATCGTCTCGC
AATACTGCCGGTATGCCGCAGAAATTCGATCTGGCAAGAACATCAAGCAG
ATGGTCAACCGCGCTCTTCAATTCGCCACCAGTGATCCTAAGGGGCCCGT
CTACCTGGCCGGTGCACGAGAAGTTATGGAGGAGGAAATTACTCCTTACA
CTCTCAATCAGAGCCATTGGGTGTCTGTCTCCCCGTCTGCTCTCCCAACT
GAAGGTGTTGAGTTGATTGCATCAGAGCTCGCAGCTGCCAAAAATCCCTT
GGTCATTGTCGGCTACTCTGGCCGAGAAGCGCGAGGTGTCCACGAGTTGG
TCACCCTCGCCAACACCTTCCAGGGCATCCGCGTCCTCGACACTGGCGGC
TGCGATATGTGCTTTCCCGGAGACCATCCGGCATACCTAGGCATGCGCTT
TGGTGTTCATGATGCCATCAAATCCGCCGACTTCATTCTCGTTGCCGACT
GTGATGTACCCTGGATTCCGACGCTCTGCAAGCCGTCCGACTCTGCCCGC
ATCATTCACGTCGACGTCGACCCCCTCAAGCAGCAGATTCCCGTCGCCTA
CATCCCCACAATTGCCACCTTCCGCGCTGAGTCGGCAACCGCTTTCAAGC
AGCTCAATGAATACATTGCATCCAACCCCTCCATTCAGCAGACAATCCAG
TCGGATGAGAACCGTGCTCGGGGCAAGCGCCGCGCAGAGGCTTTCAAGAA
GACCCGCCAGGCTATCTACAACCTCGCCCGCTTACCTCCCGGCGGGGATG
TCGCCCCCCTCAATGCCAACTATCTCATCAGCCAACTACGCCAGTCCTGC
CCTTCCGATACCATTTGGGCCATTGAATCCGTGACCCTCACCGCCAACGT
GGCCGACCAGATTGCGCCTACACTGCCGAAATCCTGGATCAACTGCGGCG
GTGGTGGTCTCGGCTGGTCCGGCGGCGGTGCCCTGGGCATCAAGCTCGCC
ACTGACGCTAAACACGGCGGGTCAAACAAAGGCAAATTTGTCTGCCAGAT
CGTCGGGGATGGCACCTATCTCTTTTCCGTTCCAGGGTCTGTTTACTGGG
TTGCTCGTCGCTATAACATTCCTATTCTTACGATCGTGCTCAACAACAAG
GGCTGGAATGCCCCTCGTCGCAGTATGCTTCTCGTCCATCCGAATGGCGA
TGGATCTCGTGCTACGAACGAAGACCTCAACATCTCTTTCGCCCCGACTC
CCGACTATCCGGGTATTGCGACAGCTGCATCCGGTGGTACCTTTTGGGGC
GCTCAGGCTGCTAATGTTGCTCAGCTGAGAAAGCTATTACCTGAGGCGAT
CAAGAGTGTGCAGAATGGTACCACGGCTGTTTTGGAGGCGCAGCTCGATG
GAACGCAGGGGAAGTACGTCGCCGCGAAGCCTTCGCTGTGATGTTTTTTT
ATCTTATTATTACGCTTGTCACGTCTATATGAGGATTATGTTTATGATAC
AGTCTTATGCGTAAGACTGATGCCGCCTCCGACCAGGACACATACTAGCA
GAAACAGAAATCATTATGCTCAATATAAATACTACATTTAACAGGGCTCC
TATAACCAGTATACAGACAATGACCTGCTC
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Coding sequence (CDS) from alignment at ch4:4873422..4875901+

>KJC3_006160-T2 ID=KJC3_006160-T2|Name=KJC3_006160-T2|organism=Aspergillus niger KJC3|type=CDS|length=1653bp|location=Sequence derived from alignment at ch4:4873422..4875901+ (Aspergillus niger KJC3)
ATGCGTCCTTGGCAGATGGTGGCCCTGTCTATGGCCGACGGTTATGCTCG
CTTGACTGGGGAACCTCAATGCGTGATTGTTCATGTCGATGTCGGCACCC
AGGGGCTCGCTGCCGCTATCCACAACGCCTCTTGTGGCCGAGCCCCCGTC
TTGATCTTCGCCGGTCTCTCCCCCTATACGATTGAGGGGGAGATGCGTGG
CTCGCGCACTGAATACATTCATTGGATCCAAGATGTTCCCGACCAGAAGC
AGATCGTCTCGCAATACTGCCGGTATGCCGCAGAAATTCGATCTGGCAAG
AACATCAAGCAGATGGTCAACCGCGCTCTTCAATTCGCCACCAGTGATCC
TAAGGGGCCCGTCTACCTGGCCGGTGCACGAGAAGTTATGGAGGAGGAAA
TTACTCCTTACACTCTCAATCAGAGCCATTGGGTGTCTGTCTCCCCGTCT
GCTCTCCCAACTGAAGGTGTTGAGTTGATTGCATCAGAGCTCGCAGCTGC
CAAAAATCCCTTGGTCATTGTCGGCTACTCTGGCCGAGAAGCGCGAGGTG
TCCACGAGTTGGTCACCCTCGCCAACACCTTCCAGGGCATCCGCGTCCTC
GACACTGGCGGCTGCGATATGTGCTTTCCCGGAGACCATCCGGCATACCT
AGGCATGCGCTTTGGTGTTCATGATGCCATCAAATCCGCCGACTTCATTC
TCGTTGCCGACTGTGATGTACCCTGGATTCCGACGCTCTGCAAGCCGTCC
GACTCTGCCCGCATCATTCACGTCGACGTCGACCCCCTCAAGCAGCAGAT
TCCCGTCGCCTACATCCCCACAATTGCCACCTTCCGCGCTGAGTCGGCAA
CCGCTTTCAAGCAGCTCAATGAATACATTGCATCCAACCCCTCCATTCAG
CAGACAATCCAGTCGGATGAGAACCGTGCTCGGGGCAAGCGCCGCGCAGA
GGCTTTCAAGAAGACCCGCCAGGCTATCTACAACCTCGCCCGCTTACCTC
CCGGCGGGGATGTCGCCCCCCTCAATGCCAACTATCTCATCAGCCAACTA
CGCCAGTCCTGCCCTTCCGATACCATTTGGGCCATTGAATCCGTGACCCT
CACCGCCAACGTGGCCGACCAGATTGCGCCTACACTGCCGAAATCCTGGA
TCAACTGCGGCGGTGGTGGTCTCGGCTGGTCCGGCGGCGGTGCCCTGGGC
ATCAAGCTCGCCACTGACGCTAAACACGGCGGGTCAAACAAAGGCAAATT
TGTCTGCCAGATCGTCGGGGATGGCACCTATCTCTTTTCCGTTCCAGGGT
CTGTTTACTGGGTTGCTCGTCGCTATAACATTCCTATTCTTACGATCGTG
CTCAACAACAAGGGCTGGAATGCCCCTCGTCGCAGTATGCTTCTCGTCCA
TCCGAATGGCGATGGATCTCGTGCTACGAACGAAGACCTCAACATCTCTT
TCGCCCCGACTCCCGACTATCCGGGTATTGCGACAGCTGCATCCGGTGGT
ACCTTTTGGGGCGCTCAGGCTGCTAATGTTGCTCAGCTGAGAAAGCTATT
ACCTGAGGCGATCAAGAGTGTGCAGAATGGTACCACGGCTGTTTTGGAGG
CGCAGCTCGATGGAACGCAGGGGAAGTACGTCGCCGCGAAGCCTTCGCTG
TGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0000287magnesium ion binding
GO:0030976thiamine pyrophosphate binding
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006160KJC3_006160Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006160-T2KJC3_006160-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006160-T2.utr5p1KJC3_006160-T2.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_006160-T2.utr5p2KJC3_006160-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_006160-T2.utr5p3KJC3_006160-T2.utr5p3Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006160-T2.exon1KJC3_006160-T2.exon1Aspergillus niger KJC3exon
KJC3_006160-T2.exon2KJC3_006160-T2.exon2Aspergillus niger KJC3exon
KJC3_006160-T2.exon3KJC3_006160-T2.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006160-T2.cdsKJC3_006160-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006160-T2.utr3p1KJC3_006160-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029035
DBxrefInterPro:IPR029061
DBxrefInterPro:IPR012001
DBxrefInterPro:IPR012000
DBxrefInterPro:IPR011766
DBxrefPFAM:PF02776
DBxrefPFAM:PF00205
DBxrefPFAM:PF02775
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4873422..4875901 +
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