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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4896671..4898881- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006169-T1 ID=KJC3_006169-T1|Name=KJC3_006169-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2211bp|location=Sequence derived from alignment at ch4:4896671..4898881- (Aspergillus niger KJC3)
CAGAGACGGGCTGATGACCATAAGCTCCTCTCACGTGACCGCCCAAATTG
TATCTCGCCTGGAAAGCGCAACCTCATCCAACGAGGAGCAAGCGTCAGTC
CGCATCGCTTCCAATCCCCGCCAATTCCCCCTCCTTCCAACCCAATTGCG
TCTGGATTGAGGGCTCCCCGCCTCACTTCACCCTCATCCTCACTCCCCGC
TCTCCCGAATGGCTGCTTCCTTCACTCGCCTGGCGGGCAGCGCGCCCAAA
AGGCTCTGCCTCCGCCCGTCGAGCTTCTCCAGAAACACTGCTATCCCCAG
ATCCCGGACGATTTCGACGTCGCTGCCTCGCCGGTACGCAGAGCCCACCA
GCTACCAGGCCACCCGTCTCATCCCGGCCGACCCGACCTTCACATCTCTG
GCCAACAAGGAGGGCCCTTCGGAGGCTGATGTGGGCGCCGCCCTCGAGTC
CGAGGACTCTGGAGCCGGCCGCAAGATCCGCCATTACACTGTCAACTTCG
GTCCCCAGCATCCTGCTGCTCACGGTGTGTTGCGTTTGATTCTGGAGCTC
AATGGTGAAGAGATCGTCCGCGCCGATCCCCACGTCGGTCTGCTTCACCG
TGGTACCGAGAAGTTGATTGAATACAAGTCCTACATGCAAGCCCTGCCAT
ACTTCGACCGATTGGATTACGTCTCCATGATGACCAACGAGCAGTGCTTC
TCCCTGGCTGTTGAGAAGCTGCTGAACATTGAGATCCCTGAGAGAGCCAA
GTACATCCGGACACTGTTCGGTGAGATGACACGCATTCTGAACCACCTCA
TGTCCGTCCTTTCCCACGCGATGGATGTTGGTGCTCTGACTCCTTTCCTG
TGGGGTTTCGAGGAGCGTGAGAAGCTCATGGTAGGTGTTTTCTGGCATGC
TGAGCTGTATGCTAGCCGCAATGACTGACACGAGTCCTCTCAATTAGGAA
TTCTACGAGCGTGTCTCCGGTGCCCGTCTCCACGCTGCCTACGTCCGCCC
TGGTGGTGTGTCTCAAGATCTGCCCCTTGGTCTCCTCGACGATATCTACC
AGTGGGCCACTCAGTTCGGTGACCGCATTGACGAGACCGAGGAACTGCTC
ACGGATAACCGTATCTGGAAGGCCAGAACCCAGGGTGTTGGTGTCGTCAA
GGCTGCCGATGCTCTCAACATGAGTTTCACTGGTGTCATGCTGCGTGGTT
CCGGTGTCCCCTGGGATATCCGTAAGTCCCAGCCTTACGATGCCTACGAC
CAGGTTGAGTTCGACGTGCCCGTCGGTGTCAACGGTGACTGCTACGACCG
TTATCTCTGCCGTATGGAGGAATTCCGCCAGTCCCTCCGCATTATCCACC
AGTGCCTGAACCAGATGCCCGCTGGTCCTGTCCGCGTTGAGGACTACAAG
ATCTCTCCTCCTCCCCGTGCGGCCATGAAGGAGAACATGGAGGCCCTGAT
CCACCACTTCCTTCTGTTCACCAAGGGTTACGCCGTTCCTCCGGGTGAGA
CCTACTCCGCCATTGAGGCTCCCAAGGGTGAGATGGGTGTGTTCCTGGTC
AGTGACGGTAGCGAGAGACCCTACCGCTGCAAGATCCGTGCTCCTGGATT
TGCTCACTTGGGTGGTTTCGACCAAGTGTCTCGTGGCCACCTTCTGGCCG
ATGCTGTCGCTATTATCGGTAAGCTATACCCAGACTGCCCCTTTTCGCAC
TAACTGCAAGCTAACACATCTTTTCAGGAACAATGGATCTTGTGTTCGGT
GAGGTTGACCGGTAGAAAAGGATGGGACCGTCTGATTCCAACGAAGACCT
GTATAACAGCTCAAGACACATGACCCTGATTTATTGGTGCCAAAATCTCG
ATTAGAAGTTGCAGATATACCAAGAGAAAGATTAATTGTCTCTATTATTA
CCATCATTCGGCTTGTGCGAGTTGTGTAACAGGTCCCCTTGGCTATGGCG
ATCTCCAAAACCAGGTCCAGCCTGCTGTACCAATGTCCTTTGCTTGCTTT
TTTCATGGCGTTGACTTTTTCCTTTGTCTGTGTCGCTGATGCTACTTCCG
TCGACTGTGTCTGTCCGTCCCCTTTCTTTTTCTCCTTGTTCTCTTCCATA
AACCCTGTGTATAGTGATCAAAACATCGACTACGATTTGGATTAGATTGG
AGTAGTAGTAGCAGCAGCAGCAGTAGTAGTAGTAGTTTGTGGAAAGTGAA
TTGTGTCTTGT back to topCoding sequence (CDS) from alignment at ch4:4896671..4898881- >KJC3_006169-T1 ID=KJC3_006169-T1|Name=KJC3_006169-T1|organism=Aspergillus niger KJC3|type=CDS|length=4293bp|location=Sequence derived from alignment at ch4:4896671..4898881- (Aspergillus niger KJC3)
GAACAATGGATCTTGTGTTCGGTGAGGTTGACCGGTAGGAATTCTACGAG
CGTGTCTCCGGTGCCCGTCTCCACGCTGCCTACGTCCGCCCTGGTGGTGT
GTCTCAAGATCTGCCCCTTGGTCTCCTCGACGATATCTACCAGTGGGCCA
CTCAGTTCGGTGACCGCATTGACGAGACCGAGGAACTGCTCACGGATAAC
CGTATCTGGAAGGCCAGAACCCAGGGTGTTGGTGTCGTCAAGGCTGCCGA
TGCTCTCAACATGAGTTTCACTGGTGTCATGCTGCGTGGTTCCGGTGTCC
CCTGGGATATCCGTAAGTCCCAGCCTTACGATGCCTACGACCAGGTTGAG
TTCGACGTGCCCGTCGGTGTCAACGGTGACTGCTACGACCGTTATCTCTG
CCGTATGGAGGAATTCCGCCAGTCCCTCCGCATTATCCACCAGTGCCTGA
ACCAGATGCCCGCTGGTCCTGTCCGCGTTGAGGACTACAAGATCTCTCCT
CCTCCCCGTGCGGCCATGAAGGAGAACATGGAGGCCCTGATCCACCACTT
CCTTCTGTTCACCAAGGGTTACGCCGTTCCTCCGGGTGAGACCTACTCCG
CCATTGAGGCTCCCAAGGGTGAGATGGGTGTGTTCCTGGTCAGTGACGGT
AGCGAGAGACCCTACCGCTGCAAGATCCGTGCTCCTGGATTTGCTCACTT
GGGTGGTTTCGACCAAGTGTCTCGTGGCCACCTTCTGGCCGATGCTGTCG
CTATTATCGATGGCTGCTTCCTTCACTCGCCTGGCGGGCAGCGCGCCCAA
AAGGCTCTGCCTCCGCCCGTCGAGCTTCTCCAGAAACACTGCTATCCCCA
GATCCCGGACGATTTCGACGTCGCTGCCTCGCCGGTACGCAGAGCCCACC
AGCTACCAGGCCACCCGTCTCATCCCGGCCGACCCGACCTTCACATCTCT
GGCCAACAAGGAGGGCCCTTCGGAGGCTGATGTGGGCGCCGCCCTCGAGT
CCGAGGACTCTGGAGCCGGCCGCAAGATCCGCCATTACACTGTCAACTTC
GGTCCCCAGCATCCTGCTGCTCACGGTGTGTTGCGTTTGATTCTGGAGCT
CAATGGTGAAGAGATCGTCCGCGCCGATCCCCACGTCGGTCTGCTTCACC
GTGGTACCGAGAAGTTGATTGAATACAAGTCCTACATGCAAGCCCTGCCA
TACTTCGACCGATTGGATTACGTCTCCATGATGACCAACGAGCAGTGCTT
CTCCCTGGCTGTTGAGAAGCTGCTGAACATTGAGATCCCTGAGAGAGCCA
AGTACATCCGGACACTGTTCGGTGAGATGACACGCATTCTGAACCACCTC
ATGTCCGTCCTTTCCCACGCGATGGATGTTGGTGCTCTGACTCCTTTCCT
GTGGGGTTTCGAGGAGCGTGAGAAGCTCATGGAACAATGGATCTTGTGTT
CGGTGAGGTTGACCGGTAGGAATTCTACGAGCGTGTCTCCGGTGCCCGTC
TCCACGCTGCCTACGTCCGCCCTGGTGGTGTGTCTCAAGATCTGCCCCTT
GGTCTCCTCGACGATATCTACCAGTGGGCCACTCAGTTCGGTGACCGCAT
TGACGAGACCGAGGAACTGCTCACGGATAACCGTATCTGGAAGGCCAGAA
CCCAGGGTGTTGGTGTCGTCAAGGCTGCCGATGCTCTCAACATGAGTTTC
ACTGGTGTCATGCTGCGTGGTTCCGGTGTCCCCTGGGATATCCGTAAGTC
CCAGCCTTACGATGCCTACGACCAGGTTGAGTTCGACGTGCCCGTCGGTG
TCAACGGTGACTGCTACGACCGTTATCTCTGCCGTATGGAGGAATTCCGC
CAGTCCCTCCGCATTATCCACCAGTGCCTGAACCAGATGCCCGCTGGTCC
TGTCCGCGTTGAGGACTACAAGATCTCTCCTCCTCCCCGTGCGGCCATGA
AGGAGAACATGGAGGCCCTGATCCACCACTTCCTTCTGTTCACCAAGGGT
TACGCCGTTCCTCCGGGTGAGACCTACTCCGCCATTGAGGCTCCCAAGGG
TGAGATGGGTGTGTTCCTGGTCAGTGACGGTAGCGAGAGACCCTACCGCT
GCAAGATCCGTGCTCCTGGATTTGCTCACTTGGGTGGTTTCGACCAAGTG
TCTCGTGGCCACCTTCTGGCCGATGCTGTCGCTATTATCGATGGCTGCTT
CCTTCACTCGCCTGGCGGGCAGCGCGCCCAAAAGGCTCTGCCTCCGCCCG
TCGAGCTTCTCCAGAAACACTGCTATCCCCAGATCCCGGACGATTTCGAC
GTCGCTGCCTCGCCGGTACGCAGAGCCCACCAGCTACCAGGCCACCCGTC
TCATCCCGGCCGACCCGACCTTCACATCTCTGGCCAACAAGGAGGGCCCT
TCGGAGGCTGATGTGGGCGCCGCCCTCGAGTCCGAGGACTCTGGAGCCGG
CCGCAAGATCCGCCATTACACTGTCAACTTCGGTCCCCAGCATCCTGCTG
CTCACGGTGTGTTGCGTTTGATTCTGGAGCTCAATGGTGAAGAGATCGTC
CGCGCCGATCCCCACGTCGGTCTGCTTCACCGTGGTACCGAGAAGTTGAT
TGAATACAAGTCCTACATGCAAGCCCTGCCATACTTCGACCGATTGGATT
ACGTCTCCATGATGACCAACGAGCAGTGCTTCTCCCTGGCTGTTGAGAAG
CTGCTGAACATTGAGATCCCTGAGAGAGCCAAGTACATCCGGACACTGTT
CGGTGAGATGACACGCATTCTGAACCACCTCATGTCCGTCCTTTCCCACG
CGATGGATGTTGGTGCTCTGACTCCTTTCCTGTGGGGTTTCGAGGAGCGT
GAGAAGCTCATGGAACAATGGATCTTGTGTTCGGTGAGGTTGACCGGTAG
GAATTCTACGAGCGTGTCTCCGGTGCCCGTCTCCACGCTGCCTACGTCCG
CCCTGGTGGTGTGTCTCAAGATCTGCCCCTTGGTCTCCTCGACGATATCT
ACCAGTGGGCCACTCAGTTCGGTGACCGCATTGACGAGACCGAGGAACTG
CTCACGGATAACCGTATCTGGAAGGCCAGAACCCAGGGTGTTGGTGTCGT
CAAGGCTGCCGATGCTCTCAACATGAGTTTCACTGGTGTCATGCTGCGTG
GTTCCGGTGTCCCCTGGGATATCCGTAAGTCCCAGCCTTACGATGCCTAC
GACCAGGTTGAGTTCGACGTGCCCGTCGGTGTCAACGGTGACTGCTACGA
CCGTTATCTCTGCCGTATGGAGGAATTCCGCCAGTCCCTCCGCATTATCC
ACCAGTGCCTGAACCAGATGCCCGCTGGTCCTGTCCGCGTTGAGGACTAC
AAGATCTCTCCTCCTCCCCGTGCGGCCATGAAGGAGAACATGGAGGCCCT
GATCCACCACTTCCTTCTGTTCACCAAGGGTTACGCCGTTCCTCCGGGTG
AGACCTACTCCGCCATTGAGGCTCCCAAGGGTGAGATGGGTGTGTTCCTG
GTCAGTGACGGTAGCGAGAGACCCTACCGCTGCAAGATCCGTGCTCCTGG
ATTTGCTCACTTGGGTGGTTTCGACCAAGTGTCTCGTGGCCACCTTCTGG
CCGATGCTGTCGCTATTATCGATGGCTGCTTCCTTCACTCGCCTGGCGGG
CAGCGCGCCCAAAAGGCTCTGCCTCCGCCCGTCGAGCTTCTCCAGAAACA
CTGCTATCCCCAGATCCCGGACGATTTCGACGTCGCTGCCTCGCCGGTAC
GCAGAGCCCACCAGCTACCAGGCCACCCGTCTCATCCCGGCCGACCCGAC
CTTCACATCTCTGGCCAACAAGGAGGGCCCTTCGGAGGCTGATGTGGGCG
CCGCCCTCGAGTCCGAGGACTCTGGAGCCGGCCGCAAGATCCGCCATTAC
ACTGTCAACTTCGGTCCCCAGCATCCTGCTGCTCACGGTGTGTTGCGTTT
GATTCTGGAGCTCAATGGTGAAGAGATCGTCCGCGCCGATCCCCACGTCG
GTCTGCTTCACCGTGGTACCGAGAAGTTGATTGAATACAAGTCCTACATG
CAAGCCCTGCCATACTTCGACCGATTGGATTACGTCTCCATGATGACCAA
CGAGCAGTGCTTCTCCCTGGCTGTTGAGAAGCTGCTGAACATTGAGATCC
CTGAGAGAGCCAAGTACATCCGGACACTGTTCGGTGAGATGACACGCATT
CTGAACCACCTCATGTCCGTCCTTTCCCACGCGATGGATGTTGGTGCTCT
GACTCCTTTCCTGTGGGGTTTCGAGGAGCGTGAGAAGCTCATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0048038 | quinone binding |
| GO:0051287 | NAD binding |
| GO:0016651 | oxidoreductase activity, acting on NAD(P)H |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006169-T1.utr3p1 | KJC3_006169-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006169-T1.utr5p1 | KJC3_006169-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029014 |
| DBxref | InterPro:IPR014029 |
| DBxref | InterPro:IPR022885 |
| DBxref | InterPro:IPR001135 |
| DBxref | InterPro:IPR038290 |
| DBxref | PFAM:PF00346 |
| Product | NADH:ubiquinone oxidoreductase 49kD subunit |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4896671..4898881 - |
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