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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4902549..4905891+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006172-T3 ID=KJC3_006172-T3|Name=KJC3_006172-T3|organism=Aspergillus niger KJC3|type=mRNA|length=3343bp|location=Sequence derived from alignment at ch4:4902549..4905891+ (Aspergillus niger KJC3)
CGAGGATAATGCCACATTTGTAAAATGGATGGTCTACTTACGGCCGTTAA
GACGGTCAAGCACAGCCAGCAGCCCGTCTTGTCGGCTGCTGCCGAGGGAA
TATATTCAGCCACCACATCCAACGGCTCTGAGCACCGGTCCAAAGCCGAT
CTCCCCGGGGACGCAACATCCTCAGACCATATCTTGGCCGTTTTGAAGGC
AAAACCCGACGAGCACGAACTCGCTCAGGTTCTAGCCATACTAGATCCAT
CAAATAAGACAGCATCCCCCAACGGTTTTGATATACGGGTCCCGCGCCCA
GTAACAGCGCAAATTCTCAATGTTCTGGTTAGCATTACAGTTCCGGATCA
TTGGGGGGCTCTTGGGCCACACTCTCAAAGTCCAAAATCAGGTAATACGA
AGCTACGAGCTGCTCTTCTGAGATGTCTCAGCAGTGTTGCGGGAATCAGT
TGCCTGGTGACCCAGCTCCGTTCTCTCATAGCTGCGTCCCGTTCATCGGC
TGAGCACGCGAAATCATCCGGTCATAAGATACAGATTAGAGATACACTTG
CGGTTATTTCCGCCTTGTTGGAGCCGAGTGACTTTGCGTTTCGCCTATAC
ACTGACATGGATGATTTGTACAGCAATGCGACACAGAAGCAAGTGGCTTG
GAGGGAATTGCTCTCAATACTTGCTGCCAGTAAAGTTTTGTCTACGGCGG
CGGAAGCGCTTACTCTGATATCTGGGCTTGACGGGCTTTCCGCAATCTCA
TGGATTGGGGAAGGCTCAAAGTACGCCACCTGGCTAGGTTCCAACATCTT
CTATATGTCTTCGAAGACTGCTCTCGGTGATGAAGAGGCATGGAAAGCTG
TGGCTCTTTTGACTGGGAGGTCGCTAAGCTTGGGCTATACAGGTATTTAA
GGACGCCTCCGCTGATAGGCTTGGTAGGCTAAGCATAATGATGCAGATCA
GGTGGTCAAAGAAATATATACTGGACTTCTTGTTCAGCGAGCACTTTCTG
AACAGTACAGCTCGCTTTTTGACCGTCTCCGGCCAACGGAGCAGCTAGCA
CTGCTCGAAGCTGTCTTTCGAGATCTCGAGAAGAGGCACTTTTCAGGTGA
AATACCTGGTGACAGTGCCAACAACACCTCGGGACAAGTGGTTAGTAGTG
TAGCGGCTCTCTGCTCAAATGCCGTGTCAAAACGGTTAGATTTGCAAGGT
CAGATTGTGGACTGGCTCTCAAAAGGCCAAGGTGGTTCGATACATTCATT
GGGGCTGCGTCGTGCTCTAGTGGCTATACTGGCACAGCAAGAAGGTGGGA
CTAAGCCTGCTTAACAATGTTTTCCTGCTGACACGGATCGCATTAGACTC
GATCAATACTCTTCTTAGTAAGAGTCTAGATCAATCAGGCGACAAGTTCT
ACATTCAACACGCTCCCATTAGGTGTCAAGAAGGTACTATATCCATGCAT
TACATATAGGAGGTAGGCACTGACCACTCTCAGCCAATGCCCAAGTTGTT
CTTCTCGCTGCGGGATACCTCCAACGACTTGATCCTGCAGCAATGATGTT
TATTGGTCGCACTGGAATCTTTCTGAACACTGTCTCAAACCGCCTGGCGG
CATCTTCACCCAGAGCTCGGTTCCTCGGTATGCTGATTGGAACTACAATT
TCGCAGCTCATCGAGCAACAGGGCAAAGGGATGAGGTTTGATCTCGAGGA
GATGGAGAGCGATGAGGCACATTGGTACTTGGACCTTGCCAAACTACACG
ATACCGTTGGGTCTATTGAATCCATGGAAACGCTTAGAGGGCCTGCGACA
AGACCAACCGAGAAGCGTAGCAAGAATCGAACATCTGGGACCGATACGCC
AAAGAAAGACACCAGAAGAGCAAAGATTGTCGCCATAGAAGAGATCAATG
ACTCGGATCATGATGACGACGAGGACGAAGATCTCGTCCCATATGAAAAG
CCCGATGAAGATCCCTCAGATTCTGATGATGACCCAACATTGGTTCAACG
CAACAAACCTACCGCACCAGTGTATGTCACAACACTAGCCGTAATCATAT
GATCACTAACATGAGTTAGGTATATCCGCGACCTGATAACCTACCTACGC
GACACTGAGAATGTAGAGCGCTACGAATTGGCTGTTGCTACCGCCCCTAC
CCTGATCCGCCGCAAGACTGGCTTTGGAACAGAGCTTGCTGAGAATATTG
AAGAATTGGCACTTGTCGTCGTGGGCTTACAGGAGCATGGAAAGATTTCC
AAATTCCAGGAAATTCAACTTCAAAGTATGATCGCACTGATCGTATCTCA
ACCTCTTAAGATGGGCCACTGGTTCTCGGCCATATTCTTCGATGGAGACC
TATCTCAACCACAGCGCTCTACAATCCTCACAGCCCTAGGCCTGGGTGCT
CGCGAACTCGGCGGAAATGGCGAAGCAGACGCTAAAGCACTGGGTCTACC
AAGCGTATCCGACGCTTCGTTCCCGTCCAAGAAGCTCCCTGGCTCCCTCG
AAGCCTTGTATCAGCCAGAGACTGAATCGCCCATCGCAAGCCTAACCAAG
CAGTTATCACGCGCCTCGCTCGAACCATTGGCTGCCCAGGCCTCAGACTC
GCTATCAGGGCCCAATGCACTGAAGGTCCGCACATTCTCCTCACGAATGG
AAGTCGAAAAGAAACGTCAGCAACGTGAGGCACAGAGACAGAAGTCCACC
GCAAAAGATCTTTACAGGGTCCTTGCAGATGGGTTCTTCTATCCTCTGAA
GGGTCGTTTCGAAATGATGATCATGCAATTTTCGTCGTAAGTTTTTCCTC
CCTCCAAATCTTTCGCCAAGCCATCATCACTAATAAACCAGTTCCACCGC
TCCCTCCTACAATCCCTTCTACGCTCCGCATCTCCTCGGTCTCTTCATTC
AAACTCTCACTCTCATCCTCTCAACAATGGGCCCCCACACGCCCTATCTA
GCAGCCGTCACGCACGAGACATTGGCATTCCTGCTCTCGCTCCACGCACG
CCCCATATCAGACGATCCAGGCATCTTGTCCTCGCTTCTATCTCTCTTCC
TCGCAGCTGTAGATCTGAACATCGCCTCCGGAACATCTGGAGAAGAGCGC
CTGGTCACCGAATACGCCACGCAGGTCATGGAGCTACGAGAGTGGGTAGG
AGAGATATTCGATCGGACGCCACCGGTCCAAGACACAAGTGATCCACGAG
AACAGGTGCGGACATTAGCCGCAGGAGTCATGGTAAAGCTGGGAGAGGTG
ATAGAGAGATACCAGGGACGGCTGATGGGTGTGAATTCGGGATTCAGATA
CTAGTTGTAAATAAACAGCCCCAAATAGTCATACCAATACCAC back to topCoding sequence (CDS) from alignment at ch4:4902549..4905891+ >KJC3_006172-T3 ID=KJC3_006172-T3|Name=KJC3_006172-T3|organism=Aspergillus niger KJC3|type=CDS|length=4977bp|location=Sequence derived from alignment at ch4:4902549..4905891+ (Aspergillus niger KJC3)
ATGATGTTTATTGGTCGCACTGGAATCTTTCTGAACACTGTCTCAAACCG
CCTGGCGGCATCTTCACCCAGAGCTCGGTTCCTCGGTATGCTGATTGGAA
CTACAATTTCGCAGCTCATCGAGCAACAGGGCAAAGGGATGAGGTTTGAT
CTCGAGGAGATGGAGAGCGATGAGGCACATTGGTACTTGGACCTTGCCAA
ACTACACGATACCGTTGGGTCTATTGAATCCATGGAAACGCTTAGAGGGC
CTGCGACAAGACCAACCGAGAAGCGTAGCAAGAATCGAACATCTGGGACC
GATACGCCAAAGAAAGACACCAGAAGAGCAAAGATTGTCGCCATAGAAGA
GATCAATGACTCGGATCATGATGACGACGAGGACGAAGATCTCGTCCCAT
ATGAAAAGCCCGATGAAGATCCCTCAGATTCTGATGATGACCCAACATTG
GTTCAACGCAACAAACCTACCGCACCAGTGTATATCCGCGACCTGATAAC
CTACCTACGCGACACTGAGAATGTAGAGCGCTACGAATTGGCTGTTGCTA
CCGCCCCTACCCTGATCCGCCGCAAGACTGGCTTTGGAACAGAGCTTGCT
GAGAATATTGAAGAATTGGCACTTGTCGTCGTGGGCTTACAGGAGCATGG
AAAGATTTCCAAATTCCAGGAAATTCAACTTCAAAGTATGATCGCACTGA
TCGTATCTCAACCTCTTAAGATGGGCCACTGGTTCTCGGCCATATTCTTC
GATGGAGACCTATCTCAACCACAGCGCTCTACAATCCTCACAGCCCTAGG
CCTGGGTGCTCGCGAACTCGGCGGAAATGGCGAAGCAGACGCTAAAGCAC
TGGGTCTACCAAGCGTATCCGACGCTTCGTTCCCGTCCAAGAAGCTCCCT
GGCTCCCTCGAAGCCTTGTATCAGCCAGAGACTGAATCGCCCATCGCAAG
CCTAACCAAGCAGTTATCACGCGCCTCGCTCGAACCATTGGCTGCCCAGG
CCTCAGACTCGCTATCAGGGCCCAATGCACTGAAGGTCCGCACATTCTCC
TCACGAATGGAAGTCGAAAAGAAACGTCAGCAACGTGAGGCACAGAGACA
GAAGTCCACCGCAAAAGATCTTTACAGGGTCCTTGCAGATGGGTTCTTCT
ATCCTCTGAAGGGTCGTTTCGAAATGATGATCATGCAATTTTCGTCTTCC
ACCGCTCCCTCCTACAATCCCTTCTACGCTCCGCATCTCCTCGGTCTCTT
CATTCAAACTCTCACTCTCATCCTCTCAACAATGGGCCCCCACACGCCCT
ATCTAGCAGCCGTCACGCACGAGACATTGGCATTCCTGCTCTCGCTCCAC
GCACGCCCCATATCAGACGATCCAGGCATCTTGTCCTCGCTTCTATCTCT
CTTCCTCGCAGCTGTAGATCTGAACATCGCCTCCGGAACATCTGGAGAAG
AGCGCCTGGTCACCGAATACGCCACGCAGGTCATGGAGCTACGAGAGTGG
GTAGGAGAGATATTCGATCGGACGCCACCGGTCCAAGACACAAGTGATCC
ACGAGAACAGGTGCGGACATTAGCCGCAGGAGTCATGGTAAAGCTGGGAG
AGGTGATAGAGAGATACCAGGGACGGCTGATGGGTGTGAATTCGGGATTC
AGATACTAGATGATGTTTATTGGTCGCACTGGAATCTTTCTGAACACTGT
CTCAAACCGCCTGGCGGCATCTTCACCCAGAGCTCGGTTCCTCGGTATGC
TGATTGGAACTACAATTTCGCAGCTCATCGAGCAACAGGGCAAAGGGATG
AGGTTTGATCTCGAGGAGATGGAGAGCGATGAGGCACATTGGTACTTGGA
CCTTGCCAAACTACACGATACCGTTGGGTCTATTGAATCCATGGAAACGC
TTAGAGGGCCTGCGACAAGACCAACCGAGAAGCGTAGCAAGAATCGAACA
TCTGGGACCGATACGCCAAAGAAAGACACCAGAAGAGCAAAGATTGTCGC
CATAGAAGAGATCAATGACTCGGATCATGATGACGACGAGGACGAAGATC
TCGTCCCATATGAAAAGCCCGATGAAGATCCCTCAGATTCTGATGATGAC
CCAACATTGGTTCAACGCAACAAACCTACCGCACCAGTGTATATCCGCGA
CCTGATAACCTACCTACGCGACACTGAGAATGTAGAGCGCTACGAATTGG
CTGTTGCTACCGCCCCTACCCTGATCCGCCGCAAGACTGGCTTTGGAACA
GAGCTTGCTGAGAATATTGAAGAATTGGCACTTGTCGTCGTGGGCTTACA
GGAGCATGGAAAGATTTCCAAATTCCAGGAAATTCAACTTCAAAGTATGA
TCGCACTGATCGTATCTCAACCTCTTAAGATGGGCCACTGGTTCTCGGCC
ATATTCTTCGATGGAGACCTATCTCAACCACAGCGCTCTACAATCCTCAC
AGCCCTAGGCCTGGGTGCTCGCGAACTCGGCGGAAATGGCGAAGCAGACG
CTAAAGCACTGGGTCTACCAAGCGTATCCGACGCTTCGTTCCCGTCCAAG
AAGCTCCCTGGCTCCCTCGAAGCCTTGTATCAGCCAGAGACTGAATCGCC
CATCGCAAGCCTAACCAAGCAGTTATCACGCGCCTCGCTCGAACCATTGG
CTGCCCAGGCCTCAGACTCGCTATCAGGGCCCAATGCACTGAAGGTCCGC
ACATTCTCCTCACGAATGGAAGTCGAAAAGAAACGTCAGCAACGTGAGGC
ACAGAGACAGAAGTCCACCGCAAAAGATCTTTACAGGGTCCTTGCAGATG
GGTTCTTCTATCCTCTGAAGGGTCGTTTCGAAATGATGATCATGCAATTT
TCGTCTTCCACCGCTCCCTCCTACAATCCCTTCTACGCTCCGCATCTCCT
CGGTCTCTTCATTCAAACTCTCACTCTCATCCTCTCAACAATGGGCCCCC
ACACGCCCTATCTAGCAGCCGTCACGCACGAGACATTGGCATTCCTGCTC
TCGCTCCACGCACGCCCCATATCAGACGATCCAGGCATCTTGTCCTCGCT
TCTATCTCTCTTCCTCGCAGCTGTAGATCTGAACATCGCCTCCGGAACAT
CTGGAGAAGAGCGCCTGGTCACCGAATACGCCACGCAGGTCATGGAGCTA
CGAGAGTGGGTAGGAGAGATATTCGATCGGACGCCACCGGTCCAAGACAC
AAGTGATCCACGAGAACAGGTGCGGACATTAGCCGCAGGAGTCATGGTAA
AGCTGGGAGAGGTGATAGAGAGATACCAGGGACGGCTGATGGGTGTGAAT
TCGGGATTCAGATACTAGATGATGTTTATTGGTCGCACTGGAATCTTTCT
GAACACTGTCTCAAACCGCCTGGCGGCATCTTCACCCAGAGCTCGGTTCC
TCGGTATGCTGATTGGAACTACAATTTCGCAGCTCATCGAGCAACAGGGC
AAAGGGATGAGGTTTGATCTCGAGGAGATGGAGAGCGATGAGGCACATTG
GTACTTGGACCTTGCCAAACTACACGATACCGTTGGGTCTATTGAATCCA
TGGAAACGCTTAGAGGGCCTGCGACAAGACCAACCGAGAAGCGTAGCAAG
AATCGAACATCTGGGACCGATACGCCAAAGAAAGACACCAGAAGAGCAAA
GATTGTCGCCATAGAAGAGATCAATGACTCGGATCATGATGACGACGAGG
ACGAAGATCTCGTCCCATATGAAAAGCCCGATGAAGATCCCTCAGATTCT
GATGATGACCCAACATTGGTTCAACGCAACAAACCTACCGCACCAGTGTA
TATCCGCGACCTGATAACCTACCTACGCGACACTGAGAATGTAGAGCGCT
ACGAATTGGCTGTTGCTACCGCCCCTACCCTGATCCGCCGCAAGACTGGC
TTTGGAACAGAGCTTGCTGAGAATATTGAAGAATTGGCACTTGTCGTCGT
GGGCTTACAGGAGCATGGAAAGATTTCCAAATTCCAGGAAATTCAACTTC
AAAGTATGATCGCACTGATCGTATCTCAACCTCTTAAGATGGGCCACTGG
TTCTCGGCCATATTCTTCGATGGAGACCTATCTCAACCACAGCGCTCTAC
AATCCTCACAGCCCTAGGCCTGGGTGCTCGCGAACTCGGCGGAAATGGCG
AAGCAGACGCTAAAGCACTGGGTCTACCAAGCGTATCCGACGCTTCGTTC
CCGTCCAAGAAGCTCCCTGGCTCCCTCGAAGCCTTGTATCAGCCAGAGAC
TGAATCGCCCATCGCAAGCCTAACCAAGCAGTTATCACGCGCCTCGCTCG
AACCATTGGCTGCCCAGGCCTCAGACTCGCTATCAGGGCCCAATGCACTG
AAGGTCCGCACATTCTCCTCACGAATGGAAGTCGAAAAGAAACGTCAGCA
ACGTGAGGCACAGAGACAGAAGTCCACCGCAAAAGATCTTTACAGGGTCC
TTGCAGATGGGTTCTTCTATCCTCTGAAGGGTCGTTTCGAAATGATGATC
ATGCAATTTTCGTCTTCCACCGCTCCCTCCTACAATCCCTTCTACGCTCC
GCATCTCCTCGGTCTCTTCATTCAAACTCTCACTCTCATCCTCTCAACAA
TGGGCCCCCACACGCCCTATCTAGCAGCCGTCACGCACGAGACATTGGCA
TTCCTGCTCTCGCTCCACGCACGCCCCATATCAGACGATCCAGGCATCTT
GTCCTCGCTTCTATCTCTCTTCCTCGCAGCTGTAGATCTGAACATCGCCT
CCGGAACATCTGGAGAAGAGCGCCTGGTCACCGAATACGCCACGCAGGTC
ATGGAGCTACGAGAGTGGGTAGGAGAGATATTCGATCGGACGCCACCGGT
CCAAGACACAAGTGATCCACGAGAACAGGTGCGGACATTAGCCGCAGGAG
TCATGGTAAAGCTGGGAGAGGTGATAGAGAGATACCAGGGACGGCTGATG
GGTGTGAATTCGGGATTCAGATACTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006172-T3.utr3p1 | KJC3_006172-T3.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR038528 |
| DBxref | InterPro:IPR019337 |
| DBxref | PFAM:PF10193 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4902549..4905891 + |
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