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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4908331..4909555- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006173-T1 ID=KJC3_006173-T1|Name=KJC3_006173-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1225bp|location=Sequence derived from alignment at ch4:4908331..4909555- (Aspergillus niger KJC3)
ATGACGATGGTCATTGAGAACCAGAACCGCCAATACGGCGGGATGGGCTT
CGATAACGTGTATCAACACAACATGCACCACAGCGCTCCGCAGTTCACCG
ACCCATGGACCGCTCAAACTTCGTCCCATTCCACTCCCCCGGTCTACGCG
ACTTCCATGGGACCCAGCCAGATTGGCCTCAGCCATGTTAAGCAGGAGGA
AGTGAGCCGCCCACCGATGTCTATGCCATACTCGAGTATTCCCGTTTCCG
CTCCCTCGATGGTCGCCGGGAGCAACTATCCTACTGCTACTGCTTCGAGT
TACCCCGGTCCGGAGATGATGGGTTTGTCGCACGACATGCCGCGCACTTC
TTTCGATCAAGCTCCGGCCTATACCACCGCCTCGCCCATGACCAGCTTCG
CGCCTGCGAGCTACGCCCCGCTTAGCTACGCTCCGTCTATGCACCACCAC
CAGGACCGTCGGATATCTCATGCGTAAGTTTACCTCATCATCTGAAGCTT
TCTGCGGTGTGTATATGGAGGGAAATATGCTTACATTCATTTTTTCATCT
TGTGTAGTGATGCTCGTGTCGGTCAATCGCAACCCCCTTCCGCCCCAACA
TTCGGAGATGCTCTTGATGCCAGCCGCGGAATGGTCGCGCTCAGCCAGGA
TATGACACCTCGCAATATCTACGGCCCTCGCAGCTCGCGAGGCTCGGGTG
ACTCCTACGGTTTCCCCTCGACACACTCTTCTGGATCGTCGATCTCTTCC
GGCGGAAACTACCCCTACTATTCCGCCTCTGTCGCATCTGTGGAGTCCTC
TGTGACTGACTACAGCTCTACTACCTCGGAATCTTACGAGAACGGCCACC
TGTCGCGGACGCTGCCTCGCCCGTCGAACCTGTTGACGGGAAGTGCGCCT
CCGGGACCCCAGTCGATGATGAGCCAGTTTAGCTCCAAGATGCCGTCCAA
CACCCAGAAGAAGCACAAGTGCAAGGTGTGCGACAAGCGGTTTACCCGCC
CGTCGTCTCTTCAGACCCATATGTACAGTCACACTGGTGAAAAACGTAAG
TTCCAGAACAAGTCTCTTTTAGTAGTGGTCTGTGATACTAATAGTCGGGA
ATCTAGCATTCGCATGTGACGTGGAAGGCTGTGGCCGTCATTTCTCGGTC
GTCTCTAACCTGCGGCGGCACAAGAAGGTCCACAAAGGAGAAAAGGAAGG
TGCTTCGGGCGAAGACGAAGAGTAA back to topCoding sequence (CDS) from alignment at ch4:4908331..4909555- >KJC3_006173-T1 ID=KJC3_006173-T1|Name=KJC3_006173-T1|organism=Aspergillus niger KJC3|type=CDS|length=3240bp|location=Sequence derived from alignment at ch4:4908331..4909555- (Aspergillus niger KJC3)
CATTCGCATGTGACGTGGAAGGCTGTGGCCGTCATTTCTCGGTCGTCTCT
AACCTGCGGCGGCACAAGAAGGTCCACAAAGGAGAAAAGGAAGGTGCTTC
GGGCGAAGACGAAGAGTAATGATGCTCGTGTCGGTCAATCGCAACCCCCT
TCCGCCCCAACATTCGGAGATGCTCTTGATGCCAGCCGCGGAATGGTCGC
GCTCAGCCAGGATATGACACCTCGCAATATCTACGGCCCTCGCAGCTCGC
GAGGCTCGGGTGACTCCTACGGTTTCCCCTCGACACACTCTTCTGGATCG
TCGATCTCTTCCGGCGGAAACTACCCCTACTATTCCGCCTCTGTCGCATC
TGTGGAGTCCTCTGTGACTGACTACAGCTCTACTACCTCGGAATCTTACG
AGAACGGCCACCTGTCGCGGACGCTGCCTCGCCCGTCGAACCTGTTGACG
GGAAGTGCGCCTCCGGGACCCCAGTCGATGATGAGCCAGTTTAGCTCCAA
GATGCCGTCCAACACCCAGAAGAAGCACAAGTGCAAGGTGTGCGACAAGC
GGTTTACCCGCCCGTCGTCTCTTCAGACCCATATGTACAGTCACACTGGT
GAAAAACATGACGATGGTCATTGAGAACCAGAACCGCCAATACGGCGGGA
TGGGCTTCGATAACGTGTATCAACACAACATGCACCACAGCGCTCCGCAG
TTCACCGACCCATGGACCGCTCAAACTTCGTCCCATTCCACTCCCCCGGT
CTACGCGACTTCCATGGGACCCAGCCAGATTGGCCTCAGCCATGTTAAGC
AGGAGGAAGTGAGCCGCCCACCGATGTCTATGCCATACTCGAGTATTCCC
GTTTCCGCTCCCTCGATGGTCGCCGGGAGCAACTATCCTACTGCTACTGC
TTCGAGTTACCCCGGTCCGGAGATGATGGGTTTGTCGCACGACATGCCGC
GCACTTCTTTCGATCAAGCTCCGGCCTATACCACCGCCTCGCCCATGACC
AGCTTCGCGCCTGCGAGCTACGCCCCGCTTAGCTACGCTCCGTCTATGCA
CCACCACCAGGACCGTCGGATATCTCATGCCATTCGCATGTGACGTGGAA
GGCTGTGGCCGTCATTTCTCGGTCGTCTCTAACCTGCGGCGGCACAAGAA
GGTCCACAAAGGAGAAAAGGAAGGTGCTTCGGGCGAAGACGAAGAGTAAT
GATGCTCGTGTCGGTCAATCGCAACCCCCTTCCGCCCCAACATTCGGAGA
TGCTCTTGATGCCAGCCGCGGAATGGTCGCGCTCAGCCAGGATATGACAC
CTCGCAATATCTACGGCCCTCGCAGCTCGCGAGGCTCGGGTGACTCCTAC
GGTTTCCCCTCGACACACTCTTCTGGATCGTCGATCTCTTCCGGCGGAAA
CTACCCCTACTATTCCGCCTCTGTCGCATCTGTGGAGTCCTCTGTGACTG
ACTACAGCTCTACTACCTCGGAATCTTACGAGAACGGCCACCTGTCGCGG
ACGCTGCCTCGCCCGTCGAACCTGTTGACGGGAAGTGCGCCTCCGGGACC
CCAGTCGATGATGAGCCAGTTTAGCTCCAAGATGCCGTCCAACACCCAGA
AGAAGCACAAGTGCAAGGTGTGCGACAAGCGGTTTACCCGCCCGTCGTCT
CTTCAGACCCATATGTACAGTCACACTGGTGAAAAACATGACGATGGTCA
TTGAGAACCAGAACCGCCAATACGGCGGGATGGGCTTCGATAACGTGTAT
CAACACAACATGCACCACAGCGCTCCGCAGTTCACCGACCCATGGACCGC
TCAAACTTCGTCCCATTCCACTCCCCCGGTCTACGCGACTTCCATGGGAC
CCAGCCAGATTGGCCTCAGCCATGTTAAGCAGGAGGAAGTGAGCCGCCCA
CCGATGTCTATGCCATACTCGAGTATTCCCGTTTCCGCTCCCTCGATGGT
CGCCGGGAGCAACTATCCTACTGCTACTGCTTCGAGTTACCCCGGTCCGG
AGATGATGGGTTTGTCGCACGACATGCCGCGCACTTCTTTCGATCAAGCT
CCGGCCTATACCACCGCCTCGCCCATGACCAGCTTCGCGCCTGCGAGCTA
CGCCCCGCTTAGCTACGCTCCGTCTATGCACCACCACCAGGACCGTCGGA
TATCTCATGCCATTCGCATGTGACGTGGAAGGCTGTGGCCGTCATTTCTC
GGTCGTCTCTAACCTGCGGCGGCACAAGAAGGTCCACAAAGGAGAAAAGG
AAGGTGCTTCGGGCGAAGACGAAGAGTAATGATGCTCGTGTCGGTCAATC
GCAACCCCCTTCCGCCCCAACATTCGGAGATGCTCTTGATGCCAGCCGCG
GAATGGTCGCGCTCAGCCAGGATATGACACCTCGCAATATCTACGGCCCT
CGCAGCTCGCGAGGCTCGGGTGACTCCTACGGTTTCCCCTCGACACACTC
TTCTGGATCGTCGATCTCTTCCGGCGGAAACTACCCCTACTATTCCGCCT
CTGTCGCATCTGTGGAGTCCTCTGTGACTGACTACAGCTCTACTACCTCG
GAATCTTACGAGAACGGCCACCTGTCGCGGACGCTGCCTCGCCCGTCGAA
CCTGTTGACGGGAAGTGCGCCTCCGGGACCCCAGTCGATGATGAGCCAGT
TTAGCTCCAAGATGCCGTCCAACACCCAGAAGAAGCACAAGTGCAAGGTG
TGCGACAAGCGGTTTACCCGCCCGTCGTCTCTTCAGACCCATATGTACAG
TCACACTGGTGAAAAACATGACGATGGTCATTGAGAACCAGAACCGCCAA
TACGGCGGGATGGGCTTCGATAACGTGTATCAACACAACATGCACCACAG
CGCTCCGCAGTTCACCGACCCATGGACCGCTCAAACTTCGTCCCATTCCA
CTCCCCCGGTCTACGCGACTTCCATGGGACCCAGCCAGATTGGCCTCAGC
CATGTTAAGCAGGAGGAAGTGAGCCGCCCACCGATGTCTATGCCATACTC
GAGTATTCCCGTTTCCGCTCCCTCGATGGTCGCCGGGAGCAACTATCCTA
CTGCTACTGCTTCGAGTTACCCCGGTCCGGAGATGATGGGTTTGTCGCAC
GACATGCCGCGCACTTCTTTCGATCAAGCTCCGGCCTATACCACCGCCTC
GCCCATGACCAGCTTCGCGCCTGCGAGCTACGCCCCGCTTAGCTACGCTC
CGTCTATGCACCACCACCAGGACCGTCGGATATCTCATGC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036236 |
| DBxref | InterPro:IPR013087 |
| DBxref | PFAM:PF12874 |
| DBxref | PFAM:PF00096 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4908331..4909555 - |
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