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KJC3_006176-T1, KJC3_006176-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006176-T1
Unique NameKJC3_006176-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4934734..4936747-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006176-T1 ID=KJC3_006176-T1|Name=KJC3_006176-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2014bp|location=Sequence derived from alignment at ch4:4934734..4936747- (Aspergillus niger KJC3)
CGAATGATGTATCAGAATTACCCTCCGCCTTGGGTCTCGACCCTCCATCC
AATAATGCCTAAGGAGGCGTTTCCCTGACGGCTGCTGCTCCCCTGACCAA
CTGGAGTTATTATTATCGTTGGTTTCACATCTTTCGCGCTGGTCCCTCTC
TGATCCCCTTTTCTACCTCCATCTGTCCTCTTTTCACATTCTCTCCTTTC
GTTCACCGGATTAATCGCTACTAGCATTTTCTTGACCGTCTCTCATCCTC
ATACTTGACAACTAATCTCACTCGCATTCCACGCCATGGGCCGATTCGGT
TTCAAAAAGTCCGGGGACGATGACGAGGATTCCGGCAATCGTCTGGCACT
TTTCGGCTCCAGATCGAAGAGCAAGAGCCCTGCGCCGCCTGCCAACCCCT
ACGCTAAACCTATCCCGACCGACCCTTACACCAAGGCCAAGATGCAGGCG
GGTGTGGCTCCTCTGCCAGCCGGAGAACAACCGCCCGCAGCTGGCCCCTC
TGGTGCCCATAACATCCCCGGAGATAACAAGTATCAAGGGTATGCGCCGA
ATCGATATGGAAACCAAGGCGGCTATGGATCCGACCGCTTTGGTGGCGGG
GGTCCTGCTGCCCCTGCCGCTTCCCGGTACGGCCCTGGCGGCTATGGAGG
ATTAGGTAGCGCCGATCCCAATGACCCCGCGGCGGCAGATGGCAACAGAG
ATGCGCTTTTTGGAGGGGCTCGGGATCGGGCACAGCAACAACAGCAGGCC
GGCCCTCCCCCGCCTTACTCCGAGGGCGGAGCTGCGTATGGCGGAGGCAG
CAACGAGTACAACACTTCCACATACCAGGAGCGCCACCTTACTGCTGAGG
AGGAAGAGGAGGAAGAAATTCAGACCATCAAGCAGGATATCCGTTTCATC
AAACAGGGCGACGTCGCCTCAACTCGCAATGCACTCCGTGTGGCTGCCCA
GGCCGAAGAGACGGGTCGAGAGACACTTGCTCGTTTGGGTGCTCAGGGAG
AGCGTATCCATGATGCCGAGAAGAGTTTGGATGTTGCTACAGTCGAGGGA
CGGATCGCGGAGGAGAAGGCTAAGGAGTTGAAGACACTCAACAAGAGTAT
GTTCGCTGTGCACGTGTCCAATCCTTTCACCAGTTCCCGGCGCCGGCGAG
AGCGTGATGAGCGAATCTTGAACACCCACCGAGCAGAGCGGGAAACTCGC
GAGGGTACCGAGAAGGAGGCTTTCAAGACCAACCAGCGGATGGAGCGCAC
GTTCAGAGACATCGACAAGGAGGCGGCCAAGCAGACCACGCGCAACAGGA
CCAACATTACCGATCGTGCCAAGTACCAATTCGAGGCGGACAGCGAGGAT
GAGGCGATGGAGAACGAGATCGAACAGAATTTGGACCTGCTTGGAGGAGC
TGCGAGCCGCCTGAATGGACTTGCTCGGGCGACAGGTCGCGAGCTGGACG
AACAGAACCGTCATTTGGAGCGTATCACGGCCAAGGTAAGTCCTTTGGAG
CTCTTGTCATCACGAACTCGAATCTTGACTAACTGCGCTGTAGAGCGACT
TTGTCGACGATCAGATCGCCATGAACCGGGCCAAGCTGGACAGAATCCAC
TAGGCTTGCTCTTAGAACCATCACTGACCGCCTGGTGCCGTCGATTTTCA
ACTGTGCATATCACCACTTGCTACCATATCCTTGGCGTTTTGGGTATTAT
ACTACATTATGCTTACTATCGGCCTTTTGGTCATTCCTTTTCGCATACGG
AGGAAGTAATAGTCGCGAATAGAGATGTCAACCATTTTAGCTCATGCTCA
GGACTTTCCATATCGCTTAGACGTAATCTGACGGCTCTTTGGGTGTCTTC
TGCATCCAATTCCGCACATCGTTGCAATTGAGTAATCTTCTTCCTATGAG
CTCCGAGAACACATGCTTTCTAAAGGTCAGCTCTAAGCACTCTTACCGTA
CTACTCAGGTTCTTAGCATCATTCAGCCCAGTCTAGTAATCGTGTCCTCC
TTCGACAGGCTACA
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Coding sequence (CDS) from alignment at ch4:4934734..4936747-

>KJC3_006176-T1 ID=KJC3_006176-T1|Name=KJC3_006176-T1|organism=Aspergillus niger KJC3|type=CDS|length=2520bp|location=Sequence derived from alignment at ch4:4934734..4936747- (Aspergillus niger KJC3)
AGCGACTTTGTCGACGATCAGATCGCCATGAACCGGGCCAAGCTGGACAG
AATCCACTAGATGGGCCGATTCGGTTTCAAAAAGTCCGGGGACGATGACG
AGGATTCCGGCAATCGTCTGGCACTTTTCGGCTCCAGATCGAAGAGCAAG
AGCCCTGCGCCGCCTGCCAACCCCTACGCTAAACCTATCCCGACCGACCC
TTACACCAAGGCCAAGATGCAGGCGGGTGTGGCTCCTCTGCCAGCCGGAG
AACAACCGCCCGCAGCTGGCCCCTCTGGTGCCCATAACATCCCCGGAGAT
AACAAGTATCAAGGGTATGCGCCGAATCGATATGGAAACCAAGGCGGCTA
TGGATCCGACCGCTTTGGTGGCGGGGGTCCTGCTGCCCCTGCCGCTTCCC
GGTACGGCCCTGGCGGCTATGGAGGATTAGGTAGCGCCGATCCCAATGAC
CCCGCGGCGGCAGATGGCAACAGAGATGCGCTTTTTGGAGGGGCTCGGGA
TCGGGCACAGCAACAACAGCAGGCCGGCCCTCCCCCGCCTTACTCCGAGG
GCGGAGCTGCGTATGGCGGAGGCAGCAACGAGTACAACACTTCCACATAC
CAGGAGCGCCACCTTACTGCTGAGGAGGAAGAGGAGGAAGAAATTCAGAC
CATCAAGCAGGATATCCGTTTCATCAAACAGGGCGACGTCGCCTCAACTC
GCAATGCACTCCGTGTGGCTGCCCAGGCCGAAGAGACGGGTCGAGAGACA
CTTGCTCGTTTGGGTGCTCAGGGAGAGCGTATCCATGATGCCGAGAAGAG
TTTGGATGTTGCTACAGTCGAGGGACGGATCGCGGAGGAGAAGGCTAAGG
AGTTGAAGACACTCAACAAGAGTATGTTCGCTGTGCACGTGTCCAATCCT
TTCACCAGTTCCCGGCGCCGGCGAGAGCGTGATGAGCGAATCTTGAACAC
CCACCGAGCAGAGCGGGAAACTCGCGAGGGTACCGAGAAGGAGGCTTTCA
AGACCAACCAGCGGATGGAGCGCACGTTCAGAGACATCGACAAGGAGGCG
GCCAAGCAGACCACGCGCAACAGGACCAACATTACCGATCGTGCCAAGTA
CCAATTCGAGGCGGACAGCGAGGATGAGGCGATGGAGAACGAGATCGAAC
AGAATTTGGACCTGCTTGGAGGAGCTGCGAGCCGCCTGAATGGACTTGCT
CGGGCGACAGGTCGCGAGCTGGACGAACAGAACCGTCATTTGGAGCGTAT
CACGGCCAAGAGCGACTTTGTCGACGATCAGATCGCCATGAACCGGGCCA
AGCTGGACAGAATCCACTAGATGGGCCGATTCGGTTTCAAAAAGTCCGGG
GACGATGACGAGGATTCCGGCAATCGTCTGGCACTTTTCGGCTCCAGATC
GAAGAGCAAGAGCCCTGCGCCGCCTGCCAACCCCTACGCTAAACCTATCC
CGACCGACCCTTACACCAAGGCCAAGATGCAGGCGGGTGTGGCTCCTCTG
CCAGCCGGAGAACAACCGCCCGCAGCTGGCCCCTCTGGTGCCCATAACAT
CCCCGGAGATAACAAGTATCAAGGGTATGCGCCGAATCGATATGGAAACC
AAGGCGGCTATGGATCCGACCGCTTTGGTGGCGGGGGTCCTGCTGCCCCT
GCCGCTTCCCGGTACGGCCCTGGCGGCTATGGAGGATTAGGTAGCGCCGA
TCCCAATGACCCCGCGGCGGCAGATGGCAACAGAGATGCGCTTTTTGGAG
GGGCTCGGGATCGGGCACAGCAACAACAGCAGGCCGGCCCTCCCCCGCCT
TACTCCGAGGGCGGAGCTGCGTATGGCGGAGGCAGCAACGAGTACAACAC
TTCCACATACCAGGAGCGCCACCTTACTGCTGAGGAGGAAGAGGAGGAAG
AAATTCAGACCATCAAGCAGGATATCCGTTTCATCAAACAGGGCGACGTC
GCCTCAACTCGCAATGCACTCCGTGTGGCTGCCCAGGCCGAAGAGACGGG
TCGAGAGACACTTGCTCGTTTGGGTGCTCAGGGAGAGCGTATCCATGATG
CCGAGAAGAGTTTGGATGTTGCTACAGTCGAGGGACGGATCGCGGAGGAG
AAGGCTAAGGAGTTGAAGACACTCAACAAGAGTATGTTCGCTGTGCACGT
GTCCAATCCTTTCACCAGTTCCCGGCGCCGGCGAGAGCGTGATGAGCGAA
TCTTGAACACCCACCGAGCAGAGCGGGAAACTCGCGAGGGTACCGAGAAG
GAGGCTTTCAAGACCAACCAGCGGATGGAGCGCACGTTCAGAGACATCGA
CAAGGAGGCGGCCAAGCAGACCACGCGCAACAGGACCAACATTACCGATC
GTGCCAAGTACCAATTCGAGGCGGACAGCGAGGATGAGGCGATGGAGAAC
GAGATCGAACAGAATTTGGACCTGCTTGGAGGAGCTGCGAGCCGCCTGAA
TGGACTTGCTCGGGCGACAGGTCGCGAGCTGGACGAACAGAACCGTCATT
TGGAGCGTATCACGGCCAAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006176KJC3_006176Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006176-T1KJC3_006176-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006176-T1.cdsKJC3_006176-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006176-T1.utr3p1KJC3_006176-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006176-T1.exon2KJC3_006176-T1.exon2Aspergillus niger KJC3exon
KJC3_006176-T1.exon1KJC3_006176-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006176-T1.utr5p1KJC3_006176-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR000727
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4934734..4936747 -
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