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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4940531..4941590+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006178-T1 ID=KJC3_006178-T1|Name=KJC3_006178-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1060bp|location=Sequence derived from alignment at ch4:4940531..4941590+ (Aspergillus niger KJC3)
GTGCATAGGTGTTGAACCAGTGAATATCAGTATCTGCAATAACTGAGTGG
ATCATTCACTTTCTAGTTATATATGTCGATGCTTCCTTCCATCAGAACAG
CTTTCTCCTCACCACCAGCCCACTTCTTCCTCTGCTTGAGTTGAGAACAG
GAACTCACAATTCAAACCGTTCGCAAGCTACTCATCTCTCATCCAAGAAA
CAAACATCTCCACCATGATGCTTTTCAACTACCTCCTCGTCTTTCTCCTT
CCCCTCCTCGTCACCGCAATCCCACACTCCACCCCCGATGATTCCAATAA
CACCGAGACCGACATTGACACCAACGCCAACGACATCCTAACCACCACCT
CCATCTTCAGCTCCACCATCTCCACCCTCAAAGGCCTTGACCTCACTTCC
TGCTCGCTCAATACCACCACTCTCAACATCAACTACAACCTCACAGCTCT
CCCCACCCCAGCCACCAACTTCACCCTCCAGCACGTTGCCCTCGGCCGAG
GAACTCAAAACTACACTTGCTCTTCACCTCAGAACACCACCAGCAAACCC
ACTTCCGTCGGCGCCCTGGCCACGCTCTTCGATGCCTCCTGCATCGCCTC
GGTCGACGAGGAGCTCCTGCACCACCTCCCTGCCCTCGTGCAAGGCATTC
CCCTCGAAACGCTGGACTTCCTCGCCACGTTGATCAGCCTGGCTGGTGCG
GGAGAGGGCATTCTCGGCGAACATTACTTTACGGGGAATGGGCAGCCGTC
CTTCGATCTTAGGTTTAGTGGGGATGATGATTGGGCTACGATGAAGAAGG
TTGCTAGTGCTAATGCCCCGAAAAGTGTGGATGTGCCGTGGCTTAAGTTG
GTGGAGATTGAGGGAGAGGGGATTAAGGTATGTCTTGTGTTGCCTCTGTT
TCTGTGTCTGTGCCTGTGTGCTTGGGATAATTGGTATTAATAATAATGCT
AGGAGGTGTATCGCGTTTATACCGCTGGCGGTGTTAGTCCGGCTACCTGC
GAAGGACAGGAGGGCGAGTTTGAGGTGGAATATGCGGCGGAGTATTGGTT
TTATGGATGA back to topCoding sequence (CDS) from alignment at ch4:4940531..4941590+ >KJC3_006178-T1 ID=KJC3_006178-T1|Name=KJC3_006178-T1|organism=Aspergillus niger KJC3|type=CDS|length=1542bp|location=Sequence derived from alignment at ch4:4940531..4941590+ (Aspergillus niger KJC3)
ATGATGCTTTTCAACTACCTCCTCGTCTTTCTCCTTCCCCTCCTCGTCAC
CGCAATCCCACACTCCACCCCCGATGATTCCAATAACACCGAGACCGACA
TTGACACCAACGCCAACGACATCCTAACCACCACCTCCATCTTCAGCTCC
ACCATCTCCACCCTCAAAGGCCTTGACCTCACTTCCTGCTCGCTCAATAC
CACCACTCTCAACATCAACTACAACCTCACAGCTCTCCCCACCCCAGCCA
CCAACTTCACCCTCCAGCACGTTGCCCTCGGCCGAGGAACTCAAAACTAC
ACTTGCTCTTCACCTCAGAACACCACCAGCAAACCCACTTCCGTCGGCGC
CCTGGCCACGCTCTTCGATGCCTCCTGCATCGCCTCGGTCGACGAGGAGC
TCCTGCACCACCTCCCTGCCCTCGTGCAAGGCATTCCCCTCGAAACGCTG
GACTTCCTCGCCACGTTGATCAGCCTGGCTGGTGCGGGAGAGGGCATTCT
CGGCGAACATTACTTTACGGGGAATGGGCAGCCGTCCTTCGATCTTAGGT
TTAGTGGGGATGATGATTGGGCTACGATGAAGAAGGTTGCTAGTGCTAAT
GCCCCGAAAAGTGTGGATGTGCCGTGGCTTAAGTTGGTGGAGATTGAGGG
AGAGGGGATTAAGGAGGTGTATCGCGTTTATACCGCTGGCGGTGTTAGTC
CGGCTACCTGCGAAGGACAGGAGGGCGAGTTTGAGGTGGAATATGCGGCG
GAGTATTGGTTTTATGGATGAATGATGCTTTTCAACTACCTCCTCGTCTT
TCTCCTTCCCCTCCTCGTCACCGCAATCCCACACTCCACCCCCGATGATT
CCAATAACACCGAGACCGACATTGACACCAACGCCAACGACATCCTAACC
ACCACCTCCATCTTCAGCTCCACCATCTCCACCCTCAAAGGCCTTGACCT
CACTTCCTGCTCGCTCAATACCACCACTCTCAACATCAACTACAACCTCA
CAGCTCTCCCCACCCCAGCCACCAACTTCACCCTCCAGCACGTTGCCCTC
GGCCGAGGAACTCAAAACTACACTTGCTCTTCACCTCAGAACACCACCAG
CAAACCCACTTCCGTCGGCGCCCTGGCCACGCTCTTCGATGCCTCCTGCA
TCGCCTCGGTCGACGAGGAGCTCCTGCACCACCTCCCTGCCCTCGTGCAA
GGCATTCCCCTCGAAACGCTGGACTTCCTCGCCACGTTGATCAGCCTGGC
TGGTGCGGGAGAGGGCATTCTCGGCGAACATTACTTTACGGGGAATGGGC
AGCCGTCCTTCGATCTTAGGTTTAGTGGGGATGATGATTGGGCTACGATG
AAGAAGGTTGCTAGTGCTAATGCCCCGAAAAGTGTGGATGTGCCGTGGCT
TAAGTTGGTGGAGATTGAGGGAGAGGGGATTAAGGAGGTGTATCGCGTTT
ATACCGCTGGCGGTGTTAGTCCGGCTACCTGCGAAGGACAGGAGGGCGAG
TTTGAGGTGGAATATGCGGCGGAGTATTGGTTTTATGGATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006178-T1.utr5p1 | KJC3_006178-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-18) |
| DBxref | InterPro:IPR021851 |
| DBxref | PFAM:PF11937 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4940531..4941590 + |
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