You are here

Home

KJC3_006179-T1, KJC3_006179-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006179-T1
Unique NameKJC3_006179-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4942878..4943840+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006179-T1 ID=KJC3_006179-T1|Name=KJC3_006179-T1|organism=Aspergillus niger KJC3|type=mRNA|length=963bp|location=Sequence derived from alignment at ch4:4942878..4943840+ (Aspergillus niger KJC3)
ATGGCTACCGACTACAGCAAGAAGACCAACGCCGAATTAATCGAGATCCT
CAAGTCGCGCAATCTCCCCCATACGGGCAAGAAAGCAGAGATGGTCGCTC
GGCTACAGGAGAACGATAACAGTGCTGCCCCGTCTGAGGAGAAGCCTGCT
GCTGCCGCTGCTACGAAGGGTAGTGGCGATAACAACACAGACGATGTCAT
TGACTGGGAAGACGATGAGGTCCCTGCTGGTGAGGCGGCTGCTAAGGCGT
CGACTGCGACGGGCGCGGCGGCCATCGCGGCCGGTGGAAAAGGCGAGGTA
GAGAATCCTGTCAAGGTCCCGAATCAGAAGTTGGATGAGGAGGCGAATCC
CGCGACGGCGAATGATTTGAAAGTGGAACAACCTGGAGATGCTGCGCAGC
AGCAGTCGAAGGAAGAGGAGGGTGCTGCAGCCGCCGCCGCCGGCGCTACG
GAGAAGGAGGGCGAGGAGGAGAAGAAGCCGGCAGTTACTTACTCCGCTGG
GTTGCCGATTACGGAGATGGAGGAGGAATTGAAGAAGAGAAAGGCTCGCG
CGGAGAAGTTCGGTGTTACGGAGGAGTCCAAGGCTGCGATTGAGGCGGCG
GAGAAGCAGCTTGAGCGGGCGAAGCGGTTCGGTACTGCGGCTCCGGCTCC
TGGGGAAGTTGGTGTGAAGAAGTTGGATGAGGCGTTGCCGGAGAAGGAGG
AGAAGTCACGCAAGAGAGGTCGCGGTGATGAGCAGAGCGGTGGTGGTGGT
CGCGGTGGGAAGAAGAGGGATCTTGGAGGGAGGAACAGATTCCGCGGCAG
AGGAGGACACGGTGGGAACCGTAACCAGGGTCAAGGTCGTCCTCAGAAGC
AACAGAATGGTGGTGGTGCTACTGCTGCTGCTGGGGCCAAGACCACTAAT
TGGAGTGAAAAGGACGTCCAGGCCATGGAAGCTCGGAAGAAGAGGTTCGG
AGCTGCTGCGTAG
back to top

Coding sequence (CDS) from alignment at ch4:4942878..4943840+

>KJC3_006179-T1 ID=KJC3_006179-T1|Name=KJC3_006179-T1|organism=Aspergillus niger KJC3|type=CDS|length=963bp|location=Sequence derived from alignment at ch4:4942878..4943840+ (Aspergillus niger KJC3)
ATGGCTACCGACTACAGCAAGAAGACCAACGCCGAATTAATCGAGATCCT
CAAGTCGCGCAATCTCCCCCATACGGGCAAGAAAGCAGAGATGGTCGCTC
GGCTACAGGAGAACGATAACAGTGCTGCCCCGTCTGAGGAGAAGCCTGCT
GCTGCCGCTGCTACGAAGGGTAGTGGCGATAACAACACAGACGATGTCAT
TGACTGGGAAGACGATGAGGTCCCTGCTGGTGAGGCGGCTGCTAAGGCGT
CGACTGCGACGGGCGCGGCGGCCATCGCGGCCGGTGGAAAAGGCGAGGTA
GAGAATCCTGTCAAGGTCCCGAATCAGAAGTTGGATGAGGAGGCGAATCC
CGCGACGGCGAATGATTTGAAAGTGGAACAACCTGGAGATGCTGCGCAGC
AGCAGTCGAAGGAAGAGGAGGGTGCTGCAGCCGCCGCCGCCGGCGCTACG
GAGAAGGAGGGCGAGGAGGAGAAGAAGCCGGCAGTTACTTACTCCGCTGG
GTTGCCGATTACGGAGATGGAGGAGGAATTGAAGAAGAGAAAGGCTCGCG
CGGAGAAGTTCGGTGTTACGGAGGAGTCCAAGGCTGCGATTGAGGCGGCG
GAGAAGCAGCTTGAGCGGGCGAAGCGGTTCGGTACTGCGGCTCCGGCTCC
TGGGGAAGTTGGTGTGAAGAAGTTGGATGAGGCGTTGCCGGAGAAGGAGG
AGAAGTCACGCAAGAGAGGTCGCGGTGATGAGCAGAGCGGTGGTGGTGGT
CGCGGTGGGAAGAAGAGGGATCTTGGAGGGAGGAACAGATTCCGCGGCAG
AGGAGGACACGGTGGGAACCGTAACCAGGGTCAAGGTCGTCCTCAGAAGC
AACAGAATGGTGGTGGTGCTACTGCTGCTGCTGGGGCCAAGACCACTAAT
TGGAGTGAAAAGGACGTCCAGGCCATGGAAGCTCGGAAGAAGAGGTTCGG
AGCTGCTGCGTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006179KJC3_006179Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006179-T1.exon1KJC3_006179-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006179-T1.cdsKJC3_006179-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006179-T1KJC3_006179-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036361
DBxrefInterPro:IPR040746
DBxrefInterPro:IPR003034
DBxrefPFAM:PF18592
DBxrefPFAM:PF02037
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4942878..4943840 +
Powered by Drupal