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KJC3_006182-T1, KJC3_006182-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006182-T1
Unique NameKJC3_006182-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4959797..4963173+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006182-T1 ID=KJC3_006182-T1|Name=KJC3_006182-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3377bp|location=Sequence derived from alignment at ch4:4959797..4963173+ (Aspergillus niger KJC3)
ACTTTCCCCGTCAAGTGCGGCTTACCCTAATATTTTCCTCATTCTCCACT
CCGTCACCTTCTCATATACTCCATTACCCATCCTTCCATCACCCGTTTCT
CTTTCGATTCACCACGAACTTCTTTGTATCTAAACCCTCTTCACTGTGCT
TGAAACTACTCCTTCCTCGGCTGTTCGACACACTGCCAGCTTCGTATTTG
TCTTCTCTGTTCCTCTTGTTCTTTTCTTCCATGTTTGTAGTTTCTTCCAC
GATCAGTCCATACTAGATGTCGAGTCCGCAAGGTGAGTGTGCCGTTGAAT
CGTCGTCCCTTTCTTTTGATTTTTGAATCCATCCTTCTTATCGCATGCCT
ATTCTTCCCCCGACTGCCCCCAATTCAATCCAAGCGATGATTTGTGTGTC
TGGGATCTTGATCGTTGCTGCCATCTGTGCCACTGCCCGGGATCTTTTTG
TCTCGTAACACCCTGTTGGCTGTATCCGCCCTCCGCCGCGCGCCCCCCCC
GGCTTTGCCTCCAACGCTCCTTCTGATACCTTGGAACACCCTGACCTACC
AGTCACACCACTTTCTTGTCTTCTTTTACCGACCGTCTGGCATGATTTGT
AACACCAGCCCTCCATCTTCCCTTTCCTTGATATGATCGCCCATGTGGAG
GCAATGCTGCTGCTCATCATCCTCGCCACTGTTTGATATCGCTTCCAGGC
GCCGCCTCCACACTTTGGCTAACGTGGGGAATCAGAATATAACAACAGAC
GCCGTTTCTCAGGACTAGAAGCCTTCTGTTCATAAAGACCTTTCCTGAAA
CGAGCTTCACCATCCTGTCGACCTTATTTTCCACCTCGTTGCCCGCTGTT
GTGTCTGCTTATACAAGCAATCCCGGCCGGATGCCATACACTGCGCCGTT
GAAGACGTCGCCTTCTGCGCAGCACATTGAACACTCTGAACTCACTCCAC
AATCCTGTCCTAGCTCCCCCACCGCTGTCGTCTCTCACCCTCAACGCCAG
CATTTGCCTCGTTCGTATTCTTCCACCTCTTATGTGCGAAGGCACCGACG
AAGCCCTTCGAGTAGCAAGGTGTTTGTCTTTCCAGAGCCCGACGGTCGTT
TCAAAGTGGATCATGTCAGCGACCCGCATGCCAGTATTCGAACGTCGCCA
CCTCCCATAAGTGATGCTGTCATCCCTCCTGGGGCTTTGATCTCACCACC
TGAATCTGCCAACAATTCAAGTGATGAAGAGGCGGCGTACCCATCTCAGG
ACGGGCTCCAGCTGAAGAGATTGGAGGCTGCGGTGAGGTCCATTGAACAG
AGACGAGTATCGTCACCGGAGAGGCAGTCGTCGGAGGTTCAGCCCTCATC
GAGCATGGCAGCCATTGCTGGTGGCCCAGTCCAACCTCCACGACCCCCCC
TCTCCAGAGAGGCTCGCAAAATATCCCACTCTCGATCGGTTACAGAAACC
TCAATTGACCGTAGGCAGGAGGAGGCTTTGACTAGCTCTCCAGAAGAAAG
TGACAGAGATGATGAGCCCCCGGTCAGGCATCCCATGGTCCGCAAGAAGT
CTGGGGAACTGGTGAGGCCAGCCCTTCGCCCACCTTCGGCTCGGCGGCGC
CCATCTAGCATGCCGGGGACTCCAACTTACGCAAAGGCTGTTCACTTCGA
CGCTCAGCTGGAACATATTCGTCATTTTCTACAATTGGATAAGCCTCAAG
CCGTGAGTGCCGACACATCACCAGTGGAGGACTTTGACACAGCAGAGGAA
TTTCCGTTCAAGAAGGGTCATCGGGACATGCCCGCTTTTGAGTGGGAGCT
GGGTCTGTCGAACTTCCCCAAAGACAGCTCTTCTCGGGCTAAGCAACGCG
TTCGATTGGAACGCCTGCACTTGTCTCTAGATAAAAACACCATGATCGGA
GTCGTTGGGGTCGCCAACCTGGCTTTCCACAAGCACGTTGCCGCTCGGTT
CACTCTTGATAATTGGAAGACTGTTTCTGAAGTCTCCGCTGAGTACAATG
ACGACCCTCGACGAAAGCCTATTCTGGATGGCTATGATAGGTTTGCTTTT
AGTATCCGGCTGGATGATCAGGCAAATTTGGAGAGGAAAACCATGTTTAT
CTGCATTCGCTACAATGTTGCTGGAGAGGAGTATTGGGACAACAACAACT
CAGAAAACTACCAAGTCAACTTTCGCAGAGTACCAAAAGAAATGCCCCAG
GCCCAGGCTCCACCCACGCGTCCTCGTACAAATTTGCCGAGGAGCAGGAG
CTTTGCTGGATCTATCAGCCGCCCACACTCAATGCCGCCTTCATTTGATG
CGTTGTCTGAGATGGACAAGTACATTTCGTTTGGCAACCCACCAACAAAT
GGCAAGAAGGAGCATTTGGCTGATGATGATCCGCATGACGTTGAATTGGT
TGCTCCGATCCGTCGCGATAAGCAAAACCACCAGGTGTTTGGGAATCGCT
ACGATTTCGAAGCCTCATTGACGGCAGCTATGCGGACCAAGCCTACTCAC
GATCGCACGACATTGACAGCTCGAGCAAAGTCGAAACTTCCGTCGCATGG
TAGTCATAGCCATTCGTCGGAACGGAGAACAAGCCAGAGGGAGGAGAACG
CGCCTTTGCCTAGCAGAGGTAGCCAGCAGCCGGGGTCCCCAGACCACCAT
AAACCCTCTACCATCGTTTCTGGCAAGCCGCATCGCGAGTCGTCGGTGTA
CAAAGAGTTGGTTGATAAATACTGCTTCTTCGGATCCGGATCGATGAATT
ACCCAAATGGTGCAGTTGGTCCTGTCACGGCAAGTCCGGACTATGAGACC
CGGTCGGGCTCTAGTAGCAGTTCCAGCTCGGTGTCTCCATGCTCATCTCC
TCGGATGGATGCGGTTTATGGTGGCGATTCTCGACACTCTCCTGCCGCCC
CATCGTCACCGAACCATATCGGATATGGATACCTTCAGCCTATGCAGAAC
AGTTTTATGAAGGATACGCAGACACCTGCTATCATCCAAGGATGAAGGAA
TATGCATAATCGCTTTAGACCCCGCAGCATACGGTATCACACGCGAACGT
CATTTGCTTTTAACGTGTCTCTTGTGTCCTTCCATTGATGGACGCCACGG
CAACTTTTTTTTATTTTTCCTCTTTCTCTTTTTCCCCACGCGGGATAAGC
ATTCTGAAGTCTGTCAAGCATGACTTGAAACTTCGAAACCCCAGTGCAGT
TGTCAATTTGACCTGCTTACCTGGTGTCGCCATGAAGCCGCCTCGTTCCA
ATATTCGACTCAACTTTCATTGACGCGCTTGCCTGGATATTAACGAGGAT
CCTTTGCGATGTATTATAAACCGCGGGATCTTACGTTATGCTGGGATGCG
CATCGTTTTCTACCTATACAACACAGG
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Coding sequence (CDS) from alignment at ch4:4959797..4963173+

>KJC3_006182-T1 ID=KJC3_006182-T1|Name=KJC3_006182-T1|organism=Aspergillus niger KJC3|type=CDS|length=2115bp|location=Sequence derived from alignment at ch4:4959797..4963173+ (Aspergillus niger KJC3)
ATGCCATACACTGCGCCGTTGAAGACGTCGCCTTCTGCGCAGCACATTGA
ACACTCTGAACTCACTCCACAATCCTGTCCTAGCTCCCCCACCGCTGTCG
TCTCTCACCCTCAACGCCAGCATTTGCCTCGTTCGTATTCTTCCACCTCT
TATGTGCGAAGGCACCGACGAAGCCCTTCGAGTAGCAAGGTGTTTGTCTT
TCCAGAGCCCGACGGTCGTTTCAAAGTGGATCATGTCAGCGACCCGCATG
CCAGTATTCGAACGTCGCCACCTCCCATAAGTGATGCTGTCATCCCTCCT
GGGGCTTTGATCTCACCACCTGAATCTGCCAACAATTCAAGTGATGAAGA
GGCGGCGTACCCATCTCAGGACGGGCTCCAGCTGAAGAGATTGGAGGCTG
CGGTGAGGTCCATTGAACAGAGACGAGTATCGTCACCGGAGAGGCAGTCG
TCGGAGGTTCAGCCCTCATCGAGCATGGCAGCCATTGCTGGTGGCCCAGT
CCAACCTCCACGACCCCCCCTCTCCAGAGAGGCTCGCAAAATATCCCACT
CTCGATCGGTTACAGAAACCTCAATTGACCGTAGGCAGGAGGAGGCTTTG
ACTAGCTCTCCAGAAGAAAGTGACAGAGATGATGAGCCCCCGGTCAGGCA
TCCCATGGTCCGCAAGAAGTCTGGGGAACTGGTGAGGCCAGCCCTTCGCC
CACCTTCGGCTCGGCGGCGCCCATCTAGCATGCCGGGGACTCCAACTTAC
GCAAAGGCTGTTCACTTCGACGCTCAGCTGGAACATATTCGTCATTTTCT
ACAATTGGATAAGCCTCAAGCCGTGAGTGCCGACACATCACCAGTGGAGG
ACTTTGACACAGCAGAGGAATTTCCGTTCAAGAAGGGTCATCGGGACATG
CCCGCTTTTGAGTGGGAGCTGGGTCTGTCGAACTTCCCCAAAGACAGCTC
TTCTCGGGCTAAGCAACGCGTTCGATTGGAACGCCTGCACTTGTCTCTAG
ATAAAAACACCATGATCGGAGTCGTTGGGGTCGCCAACCTGGCTTTCCAC
AAGCACGTTGCCGCTCGGTTCACTCTTGATAATTGGAAGACTGTTTCTGA
AGTCTCCGCTGAGTACAATGACGACCCTCGACGAAAGCCTATTCTGGATG
GCTATGATAGGTTTGCTTTTAGTATCCGGCTGGATGATCAGGCAAATTTG
GAGAGGAAAACCATGTTTATCTGCATTCGCTACAATGTTGCTGGAGAGGA
GTATTGGGACAACAACAACTCAGAAAACTACCAAGTCAACTTTCGCAGAG
TACCAAAAGAAATGCCCCAGGCCCAGGCTCCACCCACGCGTCCTCGTACA
AATTTGCCGAGGAGCAGGAGCTTTGCTGGATCTATCAGCCGCCCACACTC
AATGCCGCCTTCATTTGATGCGTTGTCTGAGATGGACAAGTACATTTCGT
TTGGCAACCCACCAACAAATGGCAAGAAGGAGCATTTGGCTGATGATGAT
CCGCATGACGTTGAATTGGTTGCTCCGATCCGTCGCGATAAGCAAAACCA
CCAGGTGTTTGGGAATCGCTACGATTTCGAAGCCTCATTGACGGCAGCTA
TGCGGACCAAGCCTACTCACGATCGCACGACATTGACAGCTCGAGCAAAG
TCGAAACTTCCGTCGCATGGTAGTCATAGCCATTCGTCGGAACGGAGAAC
AAGCCAGAGGGAGGAGAACGCGCCTTTGCCTAGCAGAGGTAGCCAGCAGC
CGGGGTCCCCAGACCACCATAAACCCTCTACCATCGTTTCTGGCAAGCCG
CATCGCGAGTCGTCGGTGTACAAAGAGTTGGTTGATAAATACTGCTTCTT
CGGATCCGGATCGATGAATTACCCAAATGGTGCAGTTGGTCCTGTCACGG
CAAGTCCGGACTATGAGACCCGGTCGGGCTCTAGTAGCAGTTCCAGCTCG
GTGTCTCCATGCTCATCTCCTCGGATGGATGCGGTTTATGGTGGCGATTC
TCGACACTCTCCTGCCGCCCCATCGTCACCGAACCATATCGGATATGGAT
ACCTTCAGCCTATGCAGAACAGTTTTATGAAGGATACGCAGACACCTGCT
ATCATCCAAGGATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006182KJC3_006182Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006182-T1.utr5p1KJC3_006182-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006182-T1.exon1KJC3_006182-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006182-T1.cdsKJC3_006182-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006182-T1.utr3p1KJC3_006182-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006182-T1KJC3_006182-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteCAZy:CBM21
DBxrefInterPro:IPR038175
DBxrefInterPro:IPR005036
DBxrefPFAM:PF03370
DBxrefPFAM:PF16760
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4959797..4963173 +
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