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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5013129..5014167- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006202-T1 ID=KJC3_006202-T1|Name=KJC3_006202-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1039bp|location=Sequence derived from alignment at ch4:5013129..5014167- (Aspergillus niger KJC3)
GGGATTTTCGTCCGCCAACTCGGCTTTCCGCTCGTTGTGATTGATAGCTT
GCCTCCCACTCCTTCGTTCTCTTCGTCCCTCTTTCCGTGTCTATATTCGG
TGTCAATCGCCAAGATGATGTTCAAGCCCTCGTCGCCCCTCTTCTCGGGT
CTTCTTTGGTAGGTCGCAACCCCATCTGACTGCCCCCTGTCACCCGCCCG
GACATCCCGCATTGCTATTCCACCCTCATCATCGTCATGCACCGTGAAGC
TAATATCACTCGTCAATCAAATAGGAAGATCCCGTGGCGTCTCTCCCAAC
CTCAGAAGGCTCGTCAGAGGAAGCGCCTCCGTGGTGTTGACCGGGTTGTC
GACACTGTCTCCGCCGCGCTGGAGCGCAATGGATACACCACCAAGGCCGT
CGAGCGCTGGTACAGGGAAATGCCTCGCGAGGAGGAGATGCTGCCCAAGG
ACAAGTACACACTGTTCGACAAGAAGGAGAAGAAGTACCGCAAGGGCATT
CACAGTACGTTATACTCCTGGACTTTTCTGCGTCGTCGATGGACCGCCTT
TCCCAATCGAGGATCTCAAACAAAGGGTATTCTTTTCAAATTTCGTGTGC
TAATGCTATGTCTCTTCCAGAGCTACCCAAGTGGACCCGTGTCAGCCAGA
GAGTGAACCCTCCGGGTTTCTAAACAGCTTATACACGCAGACTGTGTTGG
GAAGCTGGCAATCGCCTTTTACATATTTGTACCTGCATTATTCAACTGTA
CTATACACCACACGCTGTGTCTGCCGCGATGCTCTATAAGAAGCCTCGTG
GAAGGCACGGAAAGGATTACCGGAGTTTTCGGCAACTGGGGAATGACACC
ATGACTGCATTGTTCGCCTCGCTATTTACCATGTTCTTTATTTAAGCCTA
GGGCACAAGATTCAATTCGATTTCAGAGACTTGGCATTTGATGGCACCTT
TCAGATTTGTAAGGATAGACGGTTGTTGGGAACCGAGGGCAGCGCCAGAA
GGCAGCTTAACAATACAGATAGGCTATAAAGCGGCTGGA back to topCoding sequence (CDS) from alignment at ch4:5013129..5014167- >KJC3_006202-T1 ID=KJC3_006202-T1|Name=KJC3_006202-T1|organism=Aspergillus niger KJC3|type=CDS|length=981bp|location=Sequence derived from alignment at ch4:5013129..5014167- (Aspergillus niger KJC3)
AGCTACCCAAGTGGACCCGTGTCAGCCAGAGAGTGAACCCTCCGGGTTTC
TAAGAAGATCCCGTGGCGTCTCTCCCAACCTCAGAAGGCTCGTCAGAGGA
AGCGCCTCCGTGGTGTTGACCGGGTTGTCGACACTGTCTCCGCCGCGCTG
GAGCGCAATGGATACACCACCAAGGCCGTCGAGCGCTGGTACAGGGAAAT
GCCTCGCGAGGAGGAGATGCTGCCCAAGGACAAGTACACACTGTTCGACA
AGAAGGAGAAGAAGTACCGCAAGGGCATTCACAATGATGTTCAAGCCCTC
GTCGCCCCTCTTCTCGGGTCTTCTTTGAGCTACCCAAGTGGACCCGTGTC
AGCCAGAGAGTGAACCCTCCGGGTTTCTAAGAAGATCCCGTGGCGTCTCT
CCCAACCTCAGAAGGCTCGTCAGAGGAAGCGCCTCCGTGGTGTTGACCGG
GTTGTCGACACTGTCTCCGCCGCGCTGGAGCGCAATGGATACACCACCAA
GGCCGTCGAGCGCTGGTACAGGGAAATGCCTCGCGAGGAGGAGATGCTGC
CCAAGGACAAGTACACACTGTTCGACAAGAAGGAGAAGAAGTACCGCAAG
GGCATTCACAATGATGTTCAAGCCCTCGTCGCCCCTCTTCTCGGGTCTTC
TTTGAGCTACCCAAGTGGACCCGTGTCAGCCAGAGAGTGAACCCTCCGGG
TTTCTAAGAAGATCCCGTGGCGTCTCTCCCAACCTCAGAAGGCTCGTCAG
AGGAAGCGCCTCCGTGGTGTTGACCGGGTTGTCGACACTGTCTCCGCCGC
GCTGGAGCGCAATGGATACACCACCAAGGCCGTCGAGCGCTGGTACAGGG
AAATGCCTCGCGAGGAGGAGATGCTGCCCAAGGACAAGTACACACTGTTC
GACAAGAAGGAGAAGAAGTACCGCAAGGGCATTCACAATGATGTTCAAGC
CCTCGTCGCCCCTCTTCTCGGGTCTTCTTTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006202-T1.utr3p1 | KJC3_006202-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006202-T1.utr5p1 | KJC3_006202-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_4.11 |
| DBxref | InterPro:IPR016340 |
| DBxref | PFAM:PF09784 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5013129..5014167 - |
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