|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5014265..5015934+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006203-T1 ID=KJC3_006203-T1|Name=KJC3_006203-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1670bp|location=Sequence derived from alignment at ch4:5014265..5015934+ (Aspergillus niger KJC3)
CCTGCTTTCACGCCGTCGATCCGGGGTTGTTCCCCCCTCCTCTCCTCACT
TTCTGCCTGTGCTGCACTGCATTATATTGCTGCCTGTCTTCCTGTTACTG
CTTGGATGGACATCAGTTAGAGCGGCTTGAGTGAACAATGTCGCGCTCTA
CGGATTCTGGCGGCGCAACGGCCGATGCGCCCTCACTTCCCTGGAGGGCC
TTGTCCTCCACCACCATTTTCGGGGTTGCCGCATTATGCCGCTCGTTTCT
ATTCCTCTGCAGTCGGCCACAGGCAAATGGATTGGATCAGTTCCTCGAGC
TCCTCGACTCGAGGAGTGATCCCTCGCAGAGAACCAGAGGCTTGCTCACA
GGTATGCTGTCTAGACTTTTCGTTTAACGTCCCTGTGTTTAAAAGATTAT
ATGTCGGCTAACTGTTCTGACATATTAGTTTCGAATCATACCAGCGTGTA
CGTGCCTACATTGCGTCTCGAAAGCCGAGGCGACCTGATCAACTCCGACG
TCAGAGAACGCTGACCATGGCCGCTTTAATTGAGCAGGATGGATGATCCG
ATCATGTGGGGATTTCTGCCAATGCGATATAACTTTGGGCTTGCGTCCTG
GAATAAACGATGGGGGTTTGGAAGCCACGACATCTGCTATCAGACTAGGT
ATGGCAGGACTATTTGCTTGGTTCCAGCTCTCAGAATATCCGTTACTGAC
TGACCGGACTGATGTATAGGCCATTAGCACTTTTCTTTACTATGGGCCAA
GTCCTGCCGACACACCGATCGGCTCATTCGCAATACGGTGGCCTCGCCCA
GCCTGTCGTCACTCAGGCGATCCGACTCCTGTCGAAGGGGCCATTCCCCG
CTGACCCTCATCTCGCTATCCCCGAACGTCAATCGTGGAGTCTACAGAAT
GTCTGCGTCGATCCGTTTTCCGATCTACCCACAGCGTACACCACCGATGG
CCATGACTCCCATCTATCGCCGTCCTCTTACGCCTGCAACTCGTATTCCT
GGTTCCACATATTCCCAGAGGGAAAGATCCACCAAGCGCCGAACAAGACT
ATGCGCTACTTCAAATGGGGCGTGGCACGACTTATCCTCGAGGCTAGCGA
ATGCCCGGATGTGGTACCGATATGGCTAGAGGGCTTTGACCAGGTCATGC
ACGAAAGCCGCGAATTCCCACGGTTCCTGCCTCGTGTCGGAAAGGAAGTC
AGCATCACTTTCGGGCAGAAAGTAGATAGAGAGGCGGTTTTCGGGGAATA
CAGAAGGCGTTGGCAGAAGATCAGGGCCAAGGCTGAACGTGTAGCCCCGG
AGACTCGCGACTTGCCGTTTGGAGTGCTAAACGACCAGCTTTTATATGAC
CCTGAAGCAGTTGAGCTGCGAAAGGAGGTCACCAAGAAGGTCCGGGATCT
CGTTCTCGATGTCCGGCGGACTAGGGGATTGTCGGACGAAGACCCGAAGG
AAGGCCTGGTGGAGACATGGATGCAAGAGGGCCCTAAGCGCGAGGGTAAG
ATGGACGATGATTCATGGGTCCGCGACATTTGACGATGTGCATTATTGCG
AAGCAACAAAATCCTGTACAATAGAACATTGCATACTAGAACAAAAATAT
GGGCACAAGCGACATTCAATACTATCCCTTGTCTTCTCCACCGTAGCCTA
TCAACTAATGAAGACTCAAG back to topCoding sequence (CDS) from alignment at ch4:5014265..5015934+ >KJC3_006203-T1 ID=KJC3_006203-T1|Name=KJC3_006203-T1|organism=Aspergillus niger KJC3|type=CDS|length=1848bp|location=Sequence derived from alignment at ch4:5014265..5015934+ (Aspergillus niger KJC3)
ATGGATGATCCGATCATGTGGGGATTTCTGCCAATGCGATATAACTTTGG
GCTTGCGTCCTGGAATAAACGATGGGGGTTTGGAAGCCACGACATCTGCT
ATCAGACTAGGCCATTAGCACTTTTCTTTACTATGGGCCAAGTCCTGCCG
ACACACCGATCGGCTCATTCGCAATACGGTGGCCTCGCCCAGCCTGTCGT
CACTCAGGCGATCCGACTCCTGTCGAAGGGGCCATTCCCCGCTGACCCTC
ATCTCGCTATCCCCGAACGTCAATCGTGGAGTCTACAGAATGTCTGCGTC
GATCCGTTTTCCGATCTACCCACAGCGTACACCACCGATGGCCATGACTC
CCATCTATCGCCGTCCTCTTACGCCTGCAACTCGTATTCCTGGTTCCACA
TATTCCCAGAGGGAAAGATCCACCAAGCGCCGAACAAGACTATGCGCTAC
TTCAAATGGGGCGTGGCACGACTTATCCTCGAGGCTAGCGAATGCCCGGA
TGTGGTACCGATATGGCTAGAGGGCTTTGACCAGGTCATGCACGAAAGCC
GCGAATTCCCACGGTTCCTGCCTCGTGTCGGAAAGGAAGTCAGCATCACT
TTCGGGCAGAAAGTAGATAGAGAGGCGGTTTTCGGGGAATACAGAAGGCG
TTGGCAGAAGATCAGGGCCAAGGCTGAACGTGTAGCCCCGGAGACTCGCG
ACTTGCCGTTTGGAGTGCTAAACGACCAGCTTTTATATGACCCTGAAGCA
GTTGAGCTGCGAAAGGAGGTCACCAAGAAGGTCCGGGATCTCGTTCTCGA
TGTCCGGCGGACTAGGGGATTGTCGGACGAAGACCCGAAGGAAGGCCTGG
TGGAGACATGGATGCAAGAGGGCCCTAAGCGCGAGGGTAAGATGGACGAT
GATTCATGGGTCCGCGACATTTGAATGGATGATCCGATCATGTGGGGATT
TCTGCCAATGCGATATAACTTTGGGCTTGCGTCCTGGAATAAACGATGGG
GGTTTGGAAGCCACGACATCTGCTATCAGACTAGGCCATTAGCACTTTTC
TTTACTATGGGCCAAGTCCTGCCGACACACCGATCGGCTCATTCGCAATA
CGGTGGCCTCGCCCAGCCTGTCGTCACTCAGGCGATCCGACTCCTGTCGA
AGGGGCCATTCCCCGCTGACCCTCATCTCGCTATCCCCGAACGTCAATCG
TGGAGTCTACAGAATGTCTGCGTCGATCCGTTTTCCGATCTACCCACAGC
GTACACCACCGATGGCCATGACTCCCATCTATCGCCGTCCTCTTACGCCT
GCAACTCGTATTCCTGGTTCCACATATTCCCAGAGGGAAAGATCCACCAA
GCGCCGAACAAGACTATGCGCTACTTCAAATGGGGCGTGGCACGACTTAT
CCTCGAGGCTAGCGAATGCCCGGATGTGGTACCGATATGGCTAGAGGGCT
TTGACCAGGTCATGCACGAAAGCCGCGAATTCCCACGGTTCCTGCCTCGT
GTCGGAAAGGAAGTCAGCATCACTTTCGGGCAGAAAGTAGATAGAGAGGC
GGTTTTCGGGGAATACAGAAGGCGTTGGCAGAAGATCAGGGCCAAGGCTG
AACGTGTAGCCCCGGAGACTCGCGACTTGCCGTTTGGAGTGCTAAACGAC
CAGCTTTTATATGACCCTGAAGCAGTTGAGCTGCGAAAGGAGGTCACCAA
GAAGGTCCGGGATCTCGTTCTCGATGTCCGGCGGACTAGGGGATTGTCGG
ACGAAGACCCGAAGGAAGGCCTGGTGGAGACATGGATGCAAGAGGGCCCT
AAGCGCGAGGGTAAGATGGACGATGATTCATGGGTCCGCGACATTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006644 | phospholipid metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016746 | transferase activity, transferring acyl groups |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006203-T1.utr3p1 | KJC3_006203-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_4.11 |
| DBxref | InterPro:IPR002123 |
| DBxref | InterPro:IPR000872 |
| DBxref | PFAM:PF01553 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5014265..5015934 + |
|
