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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5016124..5018223+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006204-T1 ID=KJC3_006204-T1|Name=KJC3_006204-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2100bp|location=Sequence derived from alignment at ch4:5016124..5018223+ (Aspergillus niger KJC3)
TCAAAACCTCGCCTTGAATTCGCTACTCTCTTCCATCCCTATGCCCAAAA
AGCACAAGAAGACCGCCTTTGCGAAACCAGCCAGCACTGCCCACCATACC
CTTGCTTCGTCCGGCCCTCGACACGACCACTATGACCGTCTTCGCTCATC
CCACGCTTCATCCTCTTCCGCGGAACAACCCTCCGTCAATGACCTGATTC
ACCACCTTCGCCGCACGCAGGTCTCCAATGGACCTGAAAGCCCCTTCAGA
TTTGTCGCGCCCCGATCTGTACATCCCTCTCTACGGAATCTTCTTGAGCT
ACCGGAAACCCCGCCTCCTCGGCCCCGTCCGGGATCGCAACGCCTAGGAA
TCGTTGGCTCGCGACGCTTGCGACGGACGGCCGGACCACCACCACCAGAG
AGCTGGCTCCTGGGCAGCCGGGATGACGCGGAGGAAGATGATGTTGATAT
TGCTGCGGCGGAGAAAGAAAGAGTCATCTACCGATTAGATCGTCTACCCG
GCACGTCCTACCCTCCCAAGGGCAGCCTTATCGATACGGTACTCAGATCG
ATGGCTACATATTGGGATTGGCATGTTGAATATGATGGTCCGTTCCTGGC
AGCTCTTCCAAATCACCTCAAAGTGCGCCTCCTCAGCTACATTGCTATAT
ATGCGAAGGACCGACCACTAGGCGGGCTCATGCGCGGTCTGCGACCTCTA
TTCGAGAAGGCCCACGCCAGCGATAGCCCCGAGATTCATCAAGAAAGCGA
GTCCGAAGTCAACCGTCTAGACCTAAGCAGCGCCATCGGTCGATGGCTAA
GCTTGAAACAACTCTCCGCCGAGCTCCTCGTCACCGAAAAACCAAGTTCC
ATACAGCGCAAGCCCAAAGAATCCGTCCCCTCCTCCTGGGAAGAGGAATA
CGACGACGAAGAACAAGAGGGCAACACCACCACTCCAACAGCAAGCAATC
CCACCACTCTCCTCCATACCCCATCCCCAACCCTCCGCTTCTCCAACCTC
CGCTACCTCTCCCTGGCACATCCCAAACCTGGCACCGTAAACTGGAACTC
CCTCATAAGCCTCCTCTCCCGCCTCTCAACCATCACCCACTTATCTCTCG
CCCACTGGCCCATCCCAACCGTCACCCCGAACGCCATCAATGCCCGAATC
CGCCACCCCAATCACCGCTCCCTAATCTTCTCCTACGGCGGCACAGACAC
CTACTCCGCCAGCGAAAACAACTGGGCCGAAGCAGCAGGTATCCTCCGGC
GCCTCTCCCGCGTAACCTACTGCCTGAAATGGCTCGACCTCGAAGGCTGT
GGCGACTGGATCCCAGCCCTAAAATGGCAAGACAACGAATCAATCTCAAC
CGCGTACGCCTCCTCAGGCCCAGAATGGAATACCTCCTGGAGAGACATTG
AATACATCCGTCTCGGACCAGGCTGGCTTCCCCATATCGATGACGCCGAG
TTACTCCCCGAGAACAGTATCAGCCAGAGCGGCTCCTCCTCCTCGTCTTT
ATCTTCGCCTACCCGCTCCTTGGCCTTTTCGGCGCATGCGCCGCTCTCAC
CGCCGCCACCGCATCCGGCTCTTGCGGGCCGTCTAGGAGATGCGGAGCCA
GCGTCGGATCTACCTTGGGATGTGGAGGTCGAGCGGATTAAGTATCGGAG
GGGGAAGGAGCTAGAGCGATTCCGGGAGACGGTGCAGGCTGCGAAGGCAG
TCCAGCAGTGGGTTTTGAGATTGAGGAGGGAGGGGAAGGGAAAGTGGGTG
CAGTTCTCTTTTGGGTTGGAGGGGATTGAGGAGGATGGGTTGAAGAAGTT
GTTTGGGAAGGAGTGGGTGGGAATCTTGCCTTGATGGAGGTGGTGAGTCC
TATTCATCTATGCATATATATAGGGGCTATTGGAAGGTGGCAGGTATGCG
TATGGGTCGTATAGTTAGATTAGTATAGTACCTATGGCCCAGTAGGTCAT
GTTGATACTGTGGGAGATAGGTGTTATGGGACATGTTAGGTCCTGGTATA
TACGTTACTTCATGGAAAGTACTAATAGTTCTTATGAGATGATGATGGAA
GAATACCTACAACTTTGAAATGAAATACAAGTGGCAGATTTCATGATTTG
back to topCoding sequence (CDS) from alignment at ch4:5016124..5018223+ >KJC3_006204-T1 ID=KJC3_006204-T1|Name=KJC3_006204-T1|organism=Aspergillus niger KJC3|type=CDS|length=1794bp|location=Sequence derived from alignment at ch4:5016124..5018223+ (Aspergillus niger KJC3)
ATGCCCAAAAAGCACAAGAAGACCGCCTTTGCGAAACCAGCCAGCACTGC
CCACCATACCCTTGCTTCGTCCGGCCCTCGACACGACCACTATGACCGTC
TTCGCTCATCCCACGCTTCATCCTCTTCCGCGGAACAACCCTCCGTCAAT
GACCTGATTCACCACCTTCGCCGCACGCAGGTCTCCAATGGACCTGAAAG
CCCCTTCAGATTTGTCGCGCCCCGATCTGTACATCCCTCTCTACGGAATC
TTCTTGAGCTACCGGAAACCCCGCCTCCTCGGCCCCGTCCGGGATCGCAA
CGCCTAGGAATCGTTGGCTCGCGACGCTTGCGACGGACGGCCGGACCACC
ACCACCAGAGAGCTGGCTCCTGGGCAGCCGGGATGACGCGGAGGAAGATG
ATGTTGATATTGCTGCGGCGGAGAAAGAAAGAGTCATCTACCGATTAGAT
CGTCTACCCGGCACGTCCTACCCTCCCAAGGGCAGCCTTATCGATACGGT
ACTCAGATCGATGGCTACATATTGGGATTGGCATGTTGAATATGATGGTC
CGTTCCTGGCAGCTCTTCCAAATCACCTCAAAGTGCGCCTCCTCAGCTAC
ATTGCTATATATGCGAAGGACCGACCACTAGGCGGGCTCATGCGCGGTCT
GCGACCTCTATTCGAGAAGGCCCACGCCAGCGATAGCCCCGAGATTCATC
AAGAAAGCGAGTCCGAAGTCAACCGTCTAGACCTAAGCAGCGCCATCGGT
CGATGGCTAAGCTTGAAACAACTCTCCGCCGAGCTCCTCGTCACCGAAAA
ACCAAGTTCCATACAGCGCAAGCCCAAAGAATCCGTCCCCTCCTCCTGGG
AAGAGGAATACGACGACGAAGAACAAGAGGGCAACACCACCACTCCAACA
GCAAGCAATCCCACCACTCTCCTCCATACCCCATCCCCAACCCTCCGCTT
CTCCAACCTCCGCTACCTCTCCCTGGCACATCCCAAACCTGGCACCGTAA
ACTGGAACTCCCTCATAAGCCTCCTCTCCCGCCTCTCAACCATCACCCAC
TTATCTCTCGCCCACTGGCCCATCCCAACCGTCACCCCGAACGCCATCAA
TGCCCGAATCCGCCACCCCAATCACCGCTCCCTAATCTTCTCCTACGGCG
GCACAGACACCTACTCCGCCAGCGAAAACAACTGGGCCGAAGCAGCAGGT
ATCCTCCGGCGCCTCTCCCGCGTAACCTACTGCCTGAAATGGCTCGACCT
CGAAGGCTGTGGCGACTGGATCCCAGCCCTAAAATGGCAAGACAACGAAT
CAATCTCAACCGCGTACGCCTCCTCAGGCCCAGAATGGAATACCTCCTGG
AGAGACATTGAATACATCCGTCTCGGACCAGGCTGGCTTCCCCATATCGA
TGACGCCGAGTTACTCCCCGAGAACAGTATCAGCCAGAGCGGCTCCTCCT
CCTCGTCTTTATCTTCGCCTACCCGCTCCTTGGCCTTTTCGGCGCATGCG
CCGCTCTCACCGCCGCCACCGCATCCGGCTCTTGCGGGCCGTCTAGGAGA
TGCGGAGCCAGCGTCGGATCTACCTTGGGATGTGGAGGTCGAGCGGATTA
AGTATCGGAGGGGGAAGGAGCTAGAGCGATTCCGGGAGACGGTGCAGGCT
GCGAAGGCAGTCCAGCAGTGGGTTTTGAGATTGAGGAGGGAGGGGAAGGG
AAAGTGGGTGCAGTTCTCTTTTGGGTTGGAGGGGATTGAGGAGGATGGGT
TGAAGAAGTTGTTTGGGAAGGAGTGGGTGGGAATCTTGCCTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006204-T1.utr5p1 | KJC3_006204-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006204-T1.utr3p1 | KJC3_006204-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_4.11 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5016124..5018223 + |
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