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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5020592..5022523+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006206-T1 ID=KJC3_006206-T1|Name=KJC3_006206-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1932bp|location=Sequence derived from alignment at ch4:5020592..5022523+ (Aspergillus niger KJC3)
TCCATTCTCTCCTGCGAAGTACATTCGAGTATCTCTCGCCGTCTCAAGGG
TTAGCCCGCTGAATACTTTCTAGTTCTGAGCCATGTCACGATTCAGGTGC
CAGGTAGCAGCCTATCAGGCCGACCCGTCGCTCTTTCCTTCTGCCTATGG
CCTCGCTCCTTTTGCGCAATGTCCCTTTCTGAGAGAAATCCACGTCGTGG
CTGCTACAACTTCCTCTGCAGCTTATCGACTAACCTAACCTACCACTTGC
GTCAGATACTATCAATTCTATTTTACTCTCACTTCCATTATGCTTCCTAG
AAATATCCGTACTGCTAGCTTCTCCGCTGGAGATGATCTGGATTGTCCCA
CTACAGGAGAACGCAGTTCACACAGCCATCCACAGGGCTTCCCACAGAAT
AAAACATCTGGGCACATCTCGAAAAATGTTTCAGGCCTACCTCTGAGCAT
TACAGAAAATTCCTTGATAGGTAATGCCAATCATTCTTTACGGAGAGTAG
TCTCGAATTCAGAATCCACACCGCACAGGAAGGAAGACGGGATAAGGCAG
AATACAGTTAAGGATGCAAAATTCCTTCCTAAGAAACGCAAATGGGGACC
CCACATACCTCCAGTTGGTAATATTGATATGGCCGAGGCTTACATAGCAC
AGAAGGAATGCTATGAGCAGCAGAAGTTGATCGCTGCAGACAGGCTCAAG
GTGCAACGGTTGCGTGCAACGATGTGGGAGCAGAGAGAAGAGGAAACGGC
TTTAAGGGATTCGATCAGAAGTCATCTCAGTAATATCACATGCTGCAATT
GCCAATCTACTGCAGAGCTCATTGAAAAGGATTACGCTGCTCTCCGGTCA
ATCGCACACTATTATTTGGATTTGGAATACCAGTATAACCAGTCTGAGGA
TGACTTGGAGGAGCTTGAACACGAACTTACCCGCTCAGCCGCCCGACTTA
GCCGCCTGTTCCACCCGGTCGATGATAGGAAACCCCAAGGCGTTAGGACT
GATAGAGGGGCTGCGCGTCCTATTTTCCATTCTCGAAGCTTTGATTCTCA
ATCGGTCCCACTGACCACATCTGAGAGGAAGGACTCGCAGCAGCAGCCTC
AACCAGTCACATCGCAGGTGCAGGAATCCATCCTCTTTGATGATGCAGAG
AAAGACTCGGATTCATTTTCTCAAAGAAGCATGAGTTCTGTAAGCCCAGA
TCATAGTTCACGACGAGATTGGGACAAGACAGAAGCACGGCCACGCTATG
ACATCGCCGACTTTGAGTCCGACCTTGACGAGATAGCCCAAAGTGCTCCA
GGATCCCCAAGGGATGCAGCTCGCTCGTTCGGCGTGCGCAGTCATTCTGC
ACCTGACCTAGTCAAAGACCCGTTCAAGTTGGAGTTATATGAAAAGTCCT
CCCCTTTTGAACAGAATGATTTCGATAGCCCTGAGTCGCCGTTTCAGCGA
CGTAAGTTCATCGACAACTGGATTCTTCACCAGGTTCGCACCTCCTCGCT
GGAAAGTGCACGCTTGAGATCCCAGCCCGAATGGGAGACCTTACGCGCCC
AAGGCTTGACCGATGAAGAAATCAGTCAATTGGCTCTTGAATGCTGGCAC
TCGCATGACCCAGGAGCAGTGGTATCTAGTGGTTCCACAATCAAACCGTC
TAGAAAATCGGAACAAGCCAGCACTGTTATATGGCGCGGGACCTGCCGGT
CTTTCAACCATCGAAAGAGAACTAATTCCATGGCTTTTGGTGCTCGGCCA
CAGCTCCGCCGCATGTCTCGCTATGATCCCGCCTGGCGTGGATTTGGGCC
TGATGATGAGGGCAGTCAGTCAGGGGACGTAGCTAAGGAGAAAGAGTGAT
TAGTATATGCCATGTTCGTTCTTTAGATAGTGTAGCATAGAATAGGGATT
ATTGGCTAATCATAGCTCATCGTTAATGACAA back to topCoding sequence (CDS) from alignment at ch4:5020592..5022523+ >KJC3_006206-T1 ID=KJC3_006206-T1|Name=KJC3_006206-T1|organism=Aspergillus niger KJC3|type=CDS|length=1560bp|location=Sequence derived from alignment at ch4:5020592..5022523+ (Aspergillus niger KJC3)
ATGCTTCCTAGAAATATCCGTACTGCTAGCTTCTCCGCTGGAGATGATCT
GGATTGTCCCACTACAGGAGAACGCAGTTCACACAGCCATCCACAGGGCT
TCCCACAGAATAAAACATCTGGGCACATCTCGAAAAATGTTTCAGGCCTA
CCTCTGAGCATTACAGAAAATTCCTTGATAGGTAATGCCAATCATTCTTT
ACGGAGAGTAGTCTCGAATTCAGAATCCACACCGCACAGGAAGGAAGACG
GGATAAGGCAGAATACAGTTAAGGATGCAAAATTCCTTCCTAAGAAACGC
AAATGGGGACCCCACATACCTCCAGTTGGTAATATTGATATGGCCGAGGC
TTACATAGCACAGAAGGAATGCTATGAGCAGCAGAAGTTGATCGCTGCAG
ACAGGCTCAAGGTGCAACGGTTGCGTGCAACGATGTGGGAGCAGAGAGAA
GAGGAAACGGCTTTAAGGGATTCGATCAGAAGTCATCTCAGTAATATCAC
ATGCTGCAATTGCCAATCTACTGCAGAGCTCATTGAAAAGGATTACGCTG
CTCTCCGGTCAATCGCACACTATTATTTGGATTTGGAATACCAGTATAAC
CAGTCTGAGGATGACTTGGAGGAGCTTGAACACGAACTTACCCGCTCAGC
CGCCCGACTTAGCCGCCTGTTCCACCCGGTCGATGATAGGAAACCCCAAG
GCGTTAGGACTGATAGAGGGGCTGCGCGTCCTATTTTCCATTCTCGAAGC
TTTGATTCTCAATCGGTCCCACTGACCACATCTGAGAGGAAGGACTCGCA
GCAGCAGCCTCAACCAGTCACATCGCAGGTGCAGGAATCCATCCTCTTTG
ATGATGCAGAGAAAGACTCGGATTCATTTTCTCAAAGAAGCATGAGTTCT
GTAAGCCCAGATCATAGTTCACGACGAGATTGGGACAAGACAGAAGCACG
GCCACGCTATGACATCGCCGACTTTGAGTCCGACCTTGACGAGATAGCCC
AAAGTGCTCCAGGATCCCCAAGGGATGCAGCTCGCTCGTTCGGCGTGCGC
AGTCATTCTGCACCTGACCTAGTCAAAGACCCGTTCAAGTTGGAGTTATA
TGAAAAGTCCTCCCCTTTTGAACAGAATGATTTCGATAGCCCTGAGTCGC
CGTTTCAGCGACGTAAGTTCATCGACAACTGGATTCTTCACCAGGTTCGC
ACCTCCTCGCTGGAAAGTGCACGCTTGAGATCCCAGCCCGAATGGGAGAC
CTTACGCGCCCAAGGCTTGACCGATGAAGAAATCAGTCAATTGGCTCTTG
AATGCTGGCACTCGCATGACCCAGGAGCAGTGGTATCTAGTGGTTCCACA
ATCAAACCGTCTAGAAAATCGGAACAAGCCAGCACTGTTATATGGCGCGG
GACCTGCCGGTCTTTCAACCATCGAAAGAGAACTAATTCCATGGCTTTTG
GTGCTCGGCCACAGCTCCGCCGCATGTCTCGCTATGATCCCGCCTGGCGT
GGATTTGGGCCTGATGATGAGGGCAGTCAGTCAGGGGACGTAGCTAAGGA
GAAAGAGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006206-T1.utr5p1 | KJC3_006206-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006206-T1.utr3p1 | KJC3_006206-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_4.11 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5020592..5022523 + |
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