You are here

Home

KJC3_006207-T1, KJC3_006207-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006207-T1
Unique NameKJC3_006207-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5022758..5024527-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006207-T1 ID=KJC3_006207-T1|Name=KJC3_006207-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1770bp|location=Sequence derived from alignment at ch4:5022758..5024527- (Aspergillus niger KJC3)
TTTTCGGCGGCTGCTCGTCCATTCTGCTCGCTGAGTGTCTTCAATTCTGC
CCTTCTCCGTCCCTGACGGAGCTGGTCACTACCACCGTGGCATAGACTAA
CCAGTTTGTCTAGCATTACACCACATCGTGCGATCCACATTCCAACCATC
TACAATCTACATAGTATCCCGACCGATCGGAATTCAGATAAGAACCATAA
ACTCGATCTCACACTGACAACCTCGATAAAGGTACGCATCCACATTCCAA
TCTTACCCCATACATCTACCATCCCACAACTCAACTAACCATCATCACCT
TCATCCAGAGTCCCGTCTAGAGCTCCAAGCTCTTGACGGCTCTTCAACCC
AACAACCATGCCTCCCATCCACCCCTCTGCCACCCTCCTCCCCGCCAGCA
CCCAAAACACCATCACCACCTCAAAGCAGTACGAACAAAATGCCCCTCAC
CATCACCTCTTCGGCCGCTCCAGCCAAACCTGGGCCCCCGGCTCCGGCAC
TGTCGAACCAAGCCACATCAACATGAAAGGCCTAATGGCCCTCTTCGCCA
TCCTCGGCGCCGCCTTCGTCCTCGCCGCAATCTGGTTCTTCTTCTGGGCC
AAAAACGGCGGGTTCATCTGGCGCAAAGGCGACTGGGAAGAATACAAATC
GACCGTTCTCCGCCGCAAAGGACCCGACGGCCGCACTCTATCCAACGCCA
CGAAGAGCACCAAACTCGGCGGCGGCAGCGTCTACCACAAAGGCTACAGC
GACGACGGCTACACCTACACCGACGAAACAGCCACCAACCTCACCGAGAA
GACAGGCGTAACGGGGGCGACCTCCGCCGAAAAGGAACGCAAACGCCGCC
GCAAGCTCCGCGAGAAATTCCGTCGCCGCCGCAAGGACGACGAAATGACC
GCGAACTGGGAAAACGAAGTCGACGAGGATGTTGCCGCGTACAGAAAGGA
AAAGGCCGCCCGAGTCGGGGGCATTAACCGCGAAGGAGAGGGAACCTATT
ATGGTAGTGACTATGATCTCTCCAACCCAGCGAGTCATTACAACCAGAGC
GAAATCAGCGGTAGTCAGGTCCGCGATTACGCTTATGATCCTGCCCCTGC
TACAAAATCGCCATCCCGGAAACAGAGCAGACGACGCGACTTCTCCTTCG
TACCCGGCAGCGAGGAAGTCCTTAGCCAGGCGCCCACCCGCGACGACCGC
GACCGCCACCACACCCGCGAACCCTCGGCGAGAAGACATAACCGTCGGCG
TGAGAGACGCCGGAATCCCCCGCCTAGTGAATCCTCCGGATCGCGGACGA
GTAGTCCCCGCAAGCGGGAGAGACAGTCCGTGCGGGGCCATTACACGGAA
CCGTTGGATTTCTCGTCGTCGGCGCCATCGAGGTCCGAGTATCAGTATTC
GAATGTGGATACGGAGGATACGGGTACCAGGAGTTATCACCACCCAATTC
CGGGGTTGAGTAAGGGGTATAGAAGGGAGGGAGGACGAGGGAGGAGAAGG
GATAGTTTGAGTGAGAGTGATTGATTTGTTGGTTGATTACTGCTTGCTTG
ATTTGCTTGATTGGGAAAGCACTAAATGATTCGATATGATATGGTATGAT
ATGATATGATATGCAATGGATGTACATAATGCTTGTGCTTTGCTACTATT
TTTCTTGTTCTATTTGCTGTTTTTTACTATGGGTGAATATGGTATGGAAA
CGATACATGATGATTCTATGGGATGAAACTTTGATCATGGCAGTTAATAG
CAGTGAAATTGACAAGATGA
back to top

Coding sequence (CDS) from alignment at ch4:5022758..5024527-

>KJC3_006207-T1 ID=KJC3_006207-T1|Name=KJC3_006207-T1|organism=Aspergillus niger KJC3|type=CDS|length=1167bp|location=Sequence derived from alignment at ch4:5022758..5024527- (Aspergillus niger KJC3)
ATGCCTCCCATCCACCCCTCTGCCACCCTCCTCCCCGCCAGCACCCAAAA
CACCATCACCACCTCAAAGCAGTACGAACAAAATGCCCCTCACCATCACC
TCTTCGGCCGCTCCAGCCAAACCTGGGCCCCCGGCTCCGGCACTGTCGAA
CCAAGCCACATCAACATGAAAGGCCTAATGGCCCTCTTCGCCATCCTCGG
CGCCGCCTTCGTCCTCGCCGCAATCTGGTTCTTCTTCTGGGCCAAAAACG
GCGGGTTCATCTGGCGCAAAGGCGACTGGGAAGAATACAAATCGACCGTT
CTCCGCCGCAAAGGACCCGACGGCCGCACTCTATCCAACGCCACGAAGAG
CACCAAACTCGGCGGCGGCAGCGTCTACCACAAAGGCTACAGCGACGACG
GCTACACCTACACCGACGAAACAGCCACCAACCTCACCGAGAAGACAGGC
GTAACGGGGGCGACCTCCGCCGAAAAGGAACGCAAACGCCGCCGCAAGCT
CCGCGAGAAATTCCGTCGCCGCCGCAAGGACGACGAAATGACCGCGAACT
GGGAAAACGAAGTCGACGAGGATGTTGCCGCGTACAGAAAGGAAAAGGCC
GCCCGAGTCGGGGGCATTAACCGCGAAGGAGAGGGAACCTATTATGGTAG
TGACTATGATCTCTCCAACCCAGCGAGTCATTACAACCAGAGCGAAATCA
GCGGTAGTCAGGTCCGCGATTACGCTTATGATCCTGCCCCTGCTACAAAA
TCGCCATCCCGGAAACAGAGCAGACGACGCGACTTCTCCTTCGTACCCGG
CAGCGAGGAAGTCCTTAGCCAGGCGCCCACCCGCGACGACCGCGACCGCC
ACCACACCCGCGAACCCTCGGCGAGAAGACATAACCGTCGGCGTGAGAGA
CGCCGGAATCCCCCGCCTAGTGAATCCTCCGGATCGCGGACGAGTAGTCC
CCGCAAGCGGGAGAGACAGTCCGTGCGGGGCCATTACACGGAACCGTTGG
ATTTCTCGTCGTCGGCGCCATCGAGGTCCGAGTATCAGTATTCGAATGTG
GATACGGAGGATACGGGTACCAGGAGTTATCACCACCCAATTCCGGGGTT
GAGTAAGGGGTATAGAAGGGAGGGAGGACGAGGGAGGAGAAGGGATAGTT
TGAGTGAGAGTGATTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006207KJC3_006207Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006207-T1KJC3_006207-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006207-T1.cdsKJC3_006207-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006207-T1.utr3p1KJC3_006207-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006207-T1.exon2KJC3_006207-T1.exon2Aspergillus niger KJC3exon
KJC3_006207-T1.exon1KJC3_006207-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006207-T1.utr5p2KJC3_006207-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_006207-T1.utr5p1KJC3_006207-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5022758..5024527 -
Powered by Drupal