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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5028536..5032899+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006208-T1 ID=KJC3_006208-T1|Name=KJC3_006208-T1|organism=Aspergillus niger KJC3|type=mRNA|length=4364bp|location=Sequence derived from alignment at ch4:5028536..5032899+ (Aspergillus niger KJC3)
CCCCACCATTAGTGTTACGGACTAGAAAGTATCTACTCCATAGCACAAGT
CAAAAAGCAGTCCGTTCATCCTCGAACCCCACTTTGTCTGGTCTCTTTCT
TTCCCCTCCATCCACATCTTGGATTCCATCTGCCTCTCTCCATCCATTCG
GTTATCCACTCTTATTCTCTTTCCCAATTACTTCCACTTTTTTTTTGGCC
TTTCCCCTCCCCCTCTTCGTCAGGCCTCGACGGGGAACAGAAACTCTACT
TTTGAAACCATACAACCAACCTTATCATATTACCACCGCCACAACCAAAT
ACTACATTTCTACGACACACAATCCAGATAAATATAATCAACCCAGAAAA
CCGAATAAAATTTCCCGCCAACCGTCATTCGGTTACACGCTGCCCGACTG
CATTGAGACTTGCAGCCCGTGGACATTTTCTGCCGGTCATCCTCCACTCA
CCGTCTGCCAGACTACAACTGCAGGCGCGCGCGCTCCTCCTTCTGTCTCG
TTTTCCTTTTCTTCTGCTTCGCTCCTCCGTTGGTTGATTTGCTTGACCCA
CGCCTGCAACTTCCTCTCTCGCCGTCCACTCTTTCCGCCCGACTACTACT
ACTAGTAGATACCGTCTCGTTTCCACCGCTGACCCTCCACGCGCCAAACC
AACCATAACCGACGCCTTCTCTTTTAATTGTTCGTTTTTTGGTTTTTCAT
TATTCTTCGATGGAGCCTATGCAGACTGTGGACGACGACTATTTTCACCA
GGAATCCACTCTTCGTCGCTGACTCCCGATCTAGACACACACATACACAC
ACACACACACACACACACACACACCGTCTCCTGACTATCGCCTGGCCCAT
CTGCTGCCGGTCTCGTTTGCTTTGTTGAGGCTACCGCAGAAGTGGATTCC
CCCGACACTGGCACTGGGCTGAAAGGGGAGAGGGTGAAGCAGCCCAGCAC
CACCACTGAATTATCACTGGACGAGAAAAATTAACAGAAAGAAAAAAAAA
AGAAAGAAGAAAGACTAAAAAAAAAATTTCTGTCTCGTTGAGTCATTCGC
ATGAGCAGCAGCTGGTGGCTGCTGTAGGCCACCCGGAGTCCTGAAAGCCT
GTTGGATCACCACGTTTCACGTCATCCACACTGCACACTGTCGAGCCCTT
TCCCAATCAATCAATCCAACCTCTTCCCCCCCCCCCCTCTCGTCTGTCTG
TCTTGCCTGTCTCCCCTTTCCCTAAACCCACACCCACAATACCCCCCCTT
CCCCTCTTAGGGTCGGGCCTTTCCTTGGCCGCCTTTCCAGAAGTCATGTC
TGGAAAAGTCCCTCACGCCGCCTTCTGTGAGGAATATGATGAAGATGCCC
ATGTCATCCTTCCCGACACTCGTCAAGTCGCCAACCTCACTTCTAAGCGC
TCCAAGCCTGCCTTGAGATCGCCTGCAGCCCCCCTGGTCGACGTTGCAAG
TGACTCCGGCTATTCTAGTCGTACCGCCGCCACCGTCAACAGCACCCAAT
CTGGGCCGTCGGGCCGGAAGAGTCCTGTCCCTCTTAAATTAGACACTACC
CTCGTCAAGCGTGCTGACTTGGTCCGCGTTCGATCCAAAAGCACCAGAGA
ACAGTCCAAACCACGGATCGTTCGTCCCCCTCGTGAGGACAAAATGCAGG
TCGGCGCCTATCCCAACGGCGTGAGCCATGCTCCTGCCCACGCTCAGCGG
TCTCCCTCCAGGCCTCGTCGCCGTGAGACTTCGCAGATGCGCCACTACCC
AGGCACCTGCTGGGAGTGTGATCAGGGCTTGTACCATGCGTCTTCTTCGA
CTCCGGTTGACAGCCGACCATCCATGGACTATCCTTACTACATGTCGCAG
CCTCCATCATCGGCTCACGACTATCCTCCTCCCCCTTCACCGCGCGGGGA
CCCCCGATACGCTCCCAACCCAGTCCAGGACATTCATGTGTCTCGTTCCA
GTCGCCCCTCCGCCCGTGGCGGGGGTCCCATCTACCACCCCAACAACCGA
CCGATGAGCTTTCACGGCATGCTGCCTGGAATGGGACAGATGGTGTACCA
ACCATCCGGCATGAGTCGCTACGAACATGGGCCCCCGCCGTCCTCGTCAG
CGTACGCCTACAACCCATCCTCGTATGCGCCTTCTCATTACTCGCAACAG
TCGCCTTATTACAGCGGCATGTCCGACTACGGCGCCCCTTCCGAGCATCG
ACAGGAGCGATCGGTTTCCAGCACGCGGGATGGGCGGGGGCGCCGCCCGT
CTGTATACGGTGCGCCTGTGGTTGATTACGACTCTCCCTCAGCTGCCTTT
GATGATGACGAGCCCTTGGACGCTGCCCCTCCTGCGCCGCCACCACCACC
TCGGGAGCCTCGCCCCCGCCTTCCCTCTCATTCTTCCCATGATCGCGACG
AGGACTACTACCGTCGGCCACCACTGAAGCACAAGAACACCCCGCATATC
ATCCAGAAACGCCCAGAGCCGCGCAAGGGTGTATCTGCACCATCCGTCAC
GTCCGGGCACTCTGCTAGGTCCTTTGACATGGCTGACATGAAGGATGCTT
TGCCTGACGGCTACGGCTACCGGCGGTCCTCCCGGGAGACGGTCGTGCCG
GCGCGAAGCCGCAGCTACCGGCGCCCTACAGCGTATCACGACTCTGCTAG
ACCCTCGCGGATTGCCGTGGAGAACTCTCGTCGCCGTCAGCCAACTATCT
ACGACTTCCCAGACGACGATGATGATGAAGACGACGATGACGAGGAAGAG
GATGACGAGATGGATGAGAAGCATCGCGAGGCGGAGGAGTACCAAGCTAC
CCGCACAGTGAAAGCACCAGTGCCCCCGGCGCCACCCGTGCCCTTGACGG
CAGATGCTCTCTTCAAGGCCAAGTCCTCCCAGCGCGCCGAGAGCGACAGT
GGAAGCCAGAAGAGTCGCAGCAGCCGTGGGAGCGATGCCCGCACACAGAG
CGGTAGCAACGCTGGATCCAAGCCAGAAGAGGACAACAACATCGTCATGA
CGCTAAACGGTGTCACGATGAGTTTCCCTCAGGATGGCGGAAAGAAGATC
AGTGTCCGGACCGGCGAAACTGGGGCGGTCGAGCTGAACATCGAAGGCAA
ACAGCGGCCGAAAAAGTATTTGACCAATGGATCGGAGTACACTGGCAGCG
TGGCTCATAGTCGAAGGGAAATCGAAGATGCCCGACGGGTAAGGGAAATT
GAAGATTCCCGGCGGGTGAGGGAGATTGAAGATGCCCGGCGGGTACGGAG
TGATCGCAAGTCAGATCGTGCCAGTCGACGCTCTAGCCGATCGACCTACG
GTGGTCGATACTAGTGGTGCTTGACGACCATGATAACCTCTGGGGATATC
GCTCCTACCTGTCCTAGTATTTCTTCTGATCCACGTTTTGTCTCTTGCAA
CCTCACGCACTTCATCGGTTAGACTTTCGGAGCAAGGAGCGCTGTTTGCT
AAAAGTTCTTCTTCTGTCTTTATCGGGCGATCATTATGCGGCGGACCTCT
GAACCGTCACAATACCAAAATGGACGTTTAGTCCCTTCTGCCCTAGTTCT
TGAAAAAGTTGGAAGGTTCGTTTTGGGAAAAAAGAGCTCTGTTTTTGCCA
TGGGAGGCTATTTATTGCATTGGTATGGTTTACGACTTGGTTTTTTGTCT
CGGGTGTTATAAAGAGAAGAGGCGGGTTTCACCGATCACGTCCATCATGG
CGACATGATTGTATGATTCTGATGACCTGCATGACCTTTGTTTATGTCTG
ATGTTATGTCTTATGTTTGATGTCATGTTGATGCCCCATCATGTCCTGTG
TCTGGTATTCATGTTGCGATTTTCAATGTCTGGGAGCGTTTGTATTATTT
CTTTCAAATGGCCCGCCTTGTTCCTTCTGCCGTATGCTCGTCACGATATG
AGTAATGGCAGAGGAAGAAGGTATACCCGGTTATGTGATTCGATGTATTT
CCTTCACCCCAATTCCCCTTGAGTTATTTTCTCCTCCCCGTTGCGTAGTT
GGGTCTTGCCCCTTTTCATCCAGCTTGTACCTGTGTTATCTTCATGGATA
CCTACCTCTGTTTGACCACCTTTGATGATTCCCCTTGCTGCTACTGTTGG
TATTCTTCAACCATCTGCTGGTGACGGAGCTATGGAATGATATTATTCCT
TCCTAGCGACGATGTCTCCATACCTTGTTGTGTTTTCTATGTTGTGTTTC
TCCAGCTCTAGCGATTGTTTCAATACCCTTTGATGTTCACCTTGCCCATC
ATCCAATACCCTAGCGAAAATACAATGAAAACAAGAAAACATACCATCCA
TAAAGTGTACCATTCCCATACATACCGTCTTCTAGAATTCTCAATAGCAG
GTATATCAATCTTG back to topCoding sequence (CDS) from alignment at ch4:5028536..5032899+ >KJC3_006208-T1 ID=KJC3_006208-T1|Name=KJC3_006208-T1|organism=Aspergillus niger KJC3|type=CDS|length=2019bp|location=Sequence derived from alignment at ch4:5028536..5032899+ (Aspergillus niger KJC3)
ATGTCTGGAAAAGTCCCTCACGCCGCCTTCTGTGAGGAATATGATGAAGA
TGCCCATGTCATCCTTCCCGACACTCGTCAAGTCGCCAACCTCACTTCTA
AGCGCTCCAAGCCTGCCTTGAGATCGCCTGCAGCCCCCCTGGTCGACGTT
GCAAGTGACTCCGGCTATTCTAGTCGTACCGCCGCCACCGTCAACAGCAC
CCAATCTGGGCCGTCGGGCCGGAAGAGTCCTGTCCCTCTTAAATTAGACA
CTACCCTCGTCAAGCGTGCTGACTTGGTCCGCGTTCGATCCAAAAGCACC
AGAGAACAGTCCAAACCACGGATCGTTCGTCCCCCTCGTGAGGACAAAAT
GCAGGTCGGCGCCTATCCCAACGGCGTGAGCCATGCTCCTGCCCACGCTC
AGCGGTCTCCCTCCAGGCCTCGTCGCCGTGAGACTTCGCAGATGCGCCAC
TACCCAGGCACCTGCTGGGAGTGTGATCAGGGCTTGTACCATGCGTCTTC
TTCGACTCCGGTTGACAGCCGACCATCCATGGACTATCCTTACTACATGT
CGCAGCCTCCATCATCGGCTCACGACTATCCTCCTCCCCCTTCACCGCGC
GGGGACCCCCGATACGCTCCCAACCCAGTCCAGGACATTCATGTGTCTCG
TTCCAGTCGCCCCTCCGCCCGTGGCGGGGGTCCCATCTACCACCCCAACA
ACCGACCGATGAGCTTTCACGGCATGCTGCCTGGAATGGGACAGATGGTG
TACCAACCATCCGGCATGAGTCGCTACGAACATGGGCCCCCGCCGTCCTC
GTCAGCGTACGCCTACAACCCATCCTCGTATGCGCCTTCTCATTACTCGC
AACAGTCGCCTTATTACAGCGGCATGTCCGACTACGGCGCCCCTTCCGAG
CATCGACAGGAGCGATCGGTTTCCAGCACGCGGGATGGGCGGGGGCGCCG
CCCGTCTGTATACGGTGCGCCTGTGGTTGATTACGACTCTCCCTCAGCTG
CCTTTGATGATGACGAGCCCTTGGACGCTGCCCCTCCTGCGCCGCCACCA
CCACCTCGGGAGCCTCGCCCCCGCCTTCCCTCTCATTCTTCCCATGATCG
CGACGAGGACTACTACCGTCGGCCACCACTGAAGCACAAGAACACCCCGC
ATATCATCCAGAAACGCCCAGAGCCGCGCAAGGGTGTATCTGCACCATCC
GTCACGTCCGGGCACTCTGCTAGGTCCTTTGACATGGCTGACATGAAGGA
TGCTTTGCCTGACGGCTACGGCTACCGGCGGTCCTCCCGGGAGACGGTCG
TGCCGGCGCGAAGCCGCAGCTACCGGCGCCCTACAGCGTATCACGACTCT
GCTAGACCCTCGCGGATTGCCGTGGAGAACTCTCGTCGCCGTCAGCCAAC
TATCTACGACTTCCCAGACGACGATGATGATGAAGACGACGATGACGAGG
AAGAGGATGACGAGATGGATGAGAAGCATCGCGAGGCGGAGGAGTACCAA
GCTACCCGCACAGTGAAAGCACCAGTGCCCCCGGCGCCACCCGTGCCCTT
GACGGCAGATGCTCTCTTCAAGGCCAAGTCCTCCCAGCGCGCCGAGAGCG
ACAGTGGAAGCCAGAAGAGTCGCAGCAGCCGTGGGAGCGATGCCCGCACA
CAGAGCGGTAGCAACGCTGGATCCAAGCCAGAAGAGGACAACAACATCGT
CATGACGCTAAACGGTGTCACGATGAGTTTCCCTCAGGATGGCGGAAAGA
AGATCAGTGTCCGGACCGGCGAAACTGGGGCGGTCGAGCTGAACATCGAA
GGCAAACAGCGGCCGAAAAAGTATTTGACCAATGGATCGGAGTACACTGG
CAGCGTGGCTCATAGTCGAAGGGAAATCGAAGATGCCCGACGGGTAAGGG
AAATTGAAGATTCCCGGCGGGTGAGGGAGATTGAAGATGCCCGGCGGGTA
CGGAGTGATCGCAAGTCAGATCGTGCCAGTCGACGCTCTAGCCGATCGAC
CTACGGTGGTCGATACTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006208-T1.utr3p1 | KJC3_006208-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5028536..5032899 + |
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