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KJC3_006213-T1, KJC3_006213-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006213-T1
Unique NameKJC3_006213-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5046313..5047422-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006213-T1 ID=KJC3_006213-T1|Name=KJC3_006213-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1110bp|location=Sequence derived from alignment at ch4:5046313..5047422- (Aspergillus niger KJC3)
ATGAGGTATGTGCGCGTGCTACTCGCTCCGTGACTGATGGGTGGCTAACA
AAAACGTTGTCGCAAAACAGTGCTTTCTCCCCCGAGAACATCACCGGGGC
CTTCATCCCCTCGGCCCTGTTTGTCGCCGGAACTTTCTTCTTCAAGCAGG
AATTGACCCCCTTTGCCGTTGCTCTGGCTGCGGTGCTTGTGGGCTGGAAG
GTTTTCAGCAACAGTACGTACAGGAACGCTGATCGTATGACTTTGTTTGC
GGTCTTCTGACAAGTCTCAACAATTCTCTCTAGAGCCCAGAAAGGTCCTC
AACCCCGGTGATTTCCAGCACTTCACCTTGAAGGAGAAGAACGACATCTC
TCACAATGTCACTGTCTACCGTTTCGCCTTGCCCCGTCCCACCGATATCC
TGGGTCTCCCCATCGGTCAGCACATCTCGCTTGCCGCCACCATTGGCGGT
AAGGAGGTTGTCCGCTCCTACACCCCCATCTCCTCGGACAATGAGGCTGG
CTACTTCGATCTCCTTGTCAAGGCCTACCCCCAGGGTAACATCTCCAAGT
ACTTGACTACCCTGGAGGTTGGTCAGACCATGAAGGTCCGTGGCCCCAAG
GGCGCCATGGTGTACACTCCCAACATGTGCCGTCACATTGGTATGATCGC
CGGTGGTACTGGTATCACCCCCATGTACCAGATCATCAAGGCTATCATTC
GCAACCGTCCCCGTAACGGTGGAAACGACACCACCCAGGTCGACCTGATC
TTCGCCAACGTGAATCCCGACGATATCCTCATGAAGGATGAGCTTGAGCA
GCTGGCCAAGGAGGACGACGGCTTCCGCATCTACTACGTCCTCAACAACC
CTCCTGAGGGCTGGACTGGTGGTGTCGGTTTCGTCACCCCTGACATGATC
AAGGTATGTCAAATCCTCAGCGTCTGTCTTCCTGCATTGCCCACTAACCG
ATTTCTCTAGGAGCGCCTCCCTGCTCCCTCTAGCGACATCAAGGTTCTGC
TCTGCGGTCCTCCTCCCATGGTTAGCGCCATGAAGAAGGCCACCGAGTCT
CTCGGATACACCAAGGCTCGTCCCGTCAGCAAGCTCGAGGACCAGGTCTT
CTGCTTTTAA
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Coding sequence (CDS) from alignment at ch4:5046313..5047422-

>KJC3_006213-T1 ID=KJC3_006213-T1|Name=KJC3_006213-T1|organism=Aspergillus niger KJC3|type=CDS|length=3672bp|location=Sequence derived from alignment at ch4:5046313..5047422- (Aspergillus niger KJC3)
GAGCGCCTCCCTGCTCCCTCTAGCGACATCAAGGTTCTGCTCTGCGGTCC
TCCTCCCATGGTTAGCGCCATGAAGAAGGCCACCGAGTCTCTCGGATACA
CCAAGGCTCGTCCCGTCAGCAAGCTCGAGGACCAGGTCTTCTGCTTTTAA
AGCCCAGAAAGGTCCTCAACCCCGGTGATTTCCAGCACTTCACCTTGAAG
GAGAAGAACGACATCTCTCACAATGTCACTGTCTACCGTTTCGCCTTGCC
CCGTCCCACCGATATCCTGGGTCTCCCCATCGGTCAGCACATCTCGCTTG
CCGCCACCATTGGCGGTAAGGAGGTTGTCCGCTCCTACACCCCCATCTCC
TCGGACAATGAGGCTGGCTACTTCGATCTCCTTGTCAAGGCCTACCCCCA
GGGTAACATCTCCAAGTACTTGACTACCCTGGAGGTTGGTCAGACCATGA
AGGTCCGTGGCCCCAAGGGCGCCATGGTGTACACTCCCAACATGTGCCGT
CACATTGGTATGATCGCCGGTGGTACTGGTATCACCCCCATGTACCAGAT
CATCAAGGCTATCATTCGCAACCGTCCCCGTAACGGTGGAAACGACACCA
CCCAGGTCGACCTGATCTTCGCCAACGTGAATCCCGACGATATCCTCATG
AAGGATGAGCTTGAGCAGCTGGCCAAGGAGGACGACGGCTTCCGCATCTA
CTACGTCCTCAACAACCCTCCTGAGGGCTGGACTGGTGGTGTCGGTTTCG
TCACCCCTGACATGATCAAGTGCTTTCTCCCCCGAGAACATCACCGGGGC
CTTCATCCCCTCGGCCCTGTTTGTCGCCGGAACTTTCTTCTTCAAGCAGG
AATTGACCCCCTTTGCCGTTGCTCTGGCTGCGGTGCTTGTGGGCTGGAAG
GTTTTCAGCAACAATGAGGAGCGCCTCCCTGCTCCCTCTAGCGACATCAA
GGTTCTGCTCTGCGGTCCTCCTCCCATGGTTAGCGCCATGAAGAAGGCCA
CCGAGTCTCTCGGATACACCAAGGCTCGTCCCGTCAGCAAGCTCGAGGAC
CAGGTCTTCTGCTTTTAAAGCCCAGAAAGGTCCTCAACCCCGGTGATTTC
CAGCACTTCACCTTGAAGGAGAAGAACGACATCTCTCACAATGTCACTGT
CTACCGTTTCGCCTTGCCCCGTCCCACCGATATCCTGGGTCTCCCCATCG
GTCAGCACATCTCGCTTGCCGCCACCATTGGCGGTAAGGAGGTTGTCCGC
TCCTACACCCCCATCTCCTCGGACAATGAGGCTGGCTACTTCGATCTCCT
TGTCAAGGCCTACCCCCAGGGTAACATCTCCAAGTACTTGACTACCCTGG
AGGTTGGTCAGACCATGAAGGTCCGTGGCCCCAAGGGCGCCATGGTGTAC
ACTCCCAACATGTGCCGTCACATTGGTATGATCGCCGGTGGTACTGGTAT
CACCCCCATGTACCAGATCATCAAGGCTATCATTCGCAACCGTCCCCGTA
ACGGTGGAAACGACACCACCCAGGTCGACCTGATCTTCGCCAACGTGAAT
CCCGACGATATCCTCATGAAGGATGAGCTTGAGCAGCTGGCCAAGGAGGA
CGACGGCTTCCGCATCTACTACGTCCTCAACAACCCTCCTGAGGGCTGGA
CTGGTGGTGTCGGTTTCGTCACCCCTGACATGATCAAGTGCTTTCTCCCC
CGAGAACATCACCGGGGCCTTCATCCCCTCGGCCCTGTTTGTCGCCGGAA
CTTTCTTCTTCAAGCAGGAATTGACCCCCTTTGCCGTTGCTCTGGCTGCG
GTGCTTGTGGGCTGGAAGGTTTTCAGCAACAATGAGGAGCGCCTCCCTGC
TCCCTCTAGCGACATCAAGGTTCTGCTCTGCGGTCCTCCTCCCATGGTTA
GCGCCATGAAGAAGGCCACCGAGTCTCTCGGATACACCAAGGCTCGTCCC
GTCAGCAAGCTCGAGGACCAGGTCTTCTGCTTTTAAAGCCCAGAAAGGTC
CTCAACCCCGGTGATTTCCAGCACTTCACCTTGAAGGAGAAGAACGACAT
CTCTCACAATGTCACTGTCTACCGTTTCGCCTTGCCCCGTCCCACCGATA
TCCTGGGTCTCCCCATCGGTCAGCACATCTCGCTTGCCGCCACCATTGGC
GGTAAGGAGGTTGTCCGCTCCTACACCCCCATCTCCTCGGACAATGAGGC
TGGCTACTTCGATCTCCTTGTCAAGGCCTACCCCCAGGGTAACATCTCCA
AGTACTTGACTACCCTGGAGGTTGGTCAGACCATGAAGGTCCGTGGCCCC
AAGGGCGCCATGGTGTACACTCCCAACATGTGCCGTCACATTGGTATGAT
CGCCGGTGGTACTGGTATCACCCCCATGTACCAGATCATCAAGGCTATCA
TTCGCAACCGTCCCCGTAACGGTGGAAACGACACCACCCAGGTCGACCTG
ATCTTCGCCAACGTGAATCCCGACGATATCCTCATGAAGGATGAGCTTGA
GCAGCTGGCCAAGGAGGACGACGGCTTCCGCATCTACTACGTCCTCAACA
ACCCTCCTGAGGGCTGGACTGGTGGTGTCGGTTTCGTCACCCCTGACATG
ATCAAGTGCTTTCTCCCCCGAGAACATCACCGGGGCCTTCATCCCCTCGG
CCCTGTTTGTCGCCGGAACTTTCTTCTTCAAGCAGGAATTGACCCCCTTT
GCCGTTGCTCTGGCTGCGGTGCTTGTGGGCTGGAAGGTTTTCAGCAACAA
TGAGGAGCGCCTCCCTGCTCCCTCTAGCGACATCAAGGTTCTGCTCTGCG
GTCCTCCTCCCATGGTTAGCGCCATGAAGAAGGCCACCGAGTCTCTCGGA
TACACCAAGGCTCGTCCCGTCAGCAAGCTCGAGGACCAGGTCTTCTGCTT
TTAAAGCCCAGAAAGGTCCTCAACCCCGGTGATTTCCAGCACTTCACCTT
GAAGGAGAAGAACGACATCTCTCACAATGTCACTGTCTACCGTTTCGCCT
TGCCCCGTCCCACCGATATCCTGGGTCTCCCCATCGGTCAGCACATCTCG
CTTGCCGCCACCATTGGCGGTAAGGAGGTTGTCCGCTCCTACACCCCCAT
CTCCTCGGACAATGAGGCTGGCTACTTCGATCTCCTTGTCAAGGCCTACC
CCCAGGGTAACATCTCCAAGTACTTGACTACCCTGGAGGTTGGTCAGACC
ATGAAGGTCCGTGGCCCCAAGGGCGCCATGGTGTACACTCCCAACATGTG
CCGTCACATTGGTATGATCGCCGGTGGTACTGGTATCACCCCCATGTACC
AGATCATCAAGGCTATCATTCGCAACCGTCCCCGTAACGGTGGAAACGAC
ACCACCCAGGTCGACCTGATCTTCGCCAACGTGAATCCCGACGATATCCT
CATGAAGGATGAGCTTGAGCAGCTGGCCAAGGAGGACGACGGCTTCCGCA
TCTACTACGTCCTCAACAACCCTCCTGAGGGCTGGACTGGTGGTGTCGGT
TTCGTCACCCCTGACATGATCAAGTGCTTTCTCCCCCGAGAACATCACCG
GGGCCTTCATCCCCTCGGCCCTGTTTGTCGCCGGAACTTTCTTCTTCAAG
CAGGAATTGACCCCCTTTGCCGTTGCTCTGGCTGCGGTGCTTGTGGGCTG
GAAGGTTTTCAGCAACAATGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBR1KJC3_006213Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006213-T1KJC3_006213-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006213-T1.cdsKJC3_006213-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006213-T1.exon4KJC3_006213-T1.exon4Aspergillus niger KJC3exon
KJC3_006213-T1.exon3KJC3_006213-T1.exon3Aspergillus niger KJC3exon
KJC3_006213-T1.exon2KJC3_006213-T1.exon2Aspergillus niger KJC3exon
KJC3_006213-T1.exon1KJC3_006213-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR017938
DBxrefInterPro:IPR017927
DBxrefInterPro:IPR001433
DBxrefInterPro:IPR039261
DBxrefInterPro:IPR008333
DBxrefInterPro:IPR001709
DBxrefInterPro:IPR001834
DBxrefPFAM:PF00175
DBxrefPFAM:PF00970
ProductNADH-cytochrome b5 reductase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5046313..5047422 -
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