|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5048065..5049166+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006214-T1 ID=KJC3_006214-T1|Name=KJC3_006214-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1102bp|location=Sequence derived from alignment at ch4:5048065..5049166+ (Aspergillus niger KJC3)
ATGACTCCCGAGGAACCTCCGGCCTTCAATTTGACCGAGGTCGATCGTCA
AGTCCTCGTGCAGACCGACGAGGAGTTCGTGCTTCATGACTGGGAGGATC
TCAAGTCCATCATCGGTAGGTGATTTACGCATAACAGAAGTTCCCTTGAA
TGATTATACATACAGTAAAGTGAGCTAAAGGGAGAGGAAGAGAGAAAAAG
AGAACTACTACTACCACTACTCTCTCTCTACCCCTCACATGCTCGCCTTC
CCCCCGCGTCCCTACCCTTCATCCATCCATCCATCCATCCATCCATCCAT
TCATTCCTCGAATCCATCTCGATCATTCCATCCATCTACCCACCCATCAA
CCAATATCTGATGGTTCCGCATTCCAGTCCCTGACTTTAAACTCTCTTTC
CCCCATAACTCGCTATACCCCCTTTTACCCCGCAACCCATCCTCACGACT
CCCAACCTAACTTCCTCCGTACTAACCCGATCACCCAAACCTTCCAGCAC
GCAACGATCTCGGCATCCTAAAACGGAAACCCTCCGATCTAACCCGCTAC
CTGGCCTGGTCTCATCAAACCAAGCAACAGTACGGCACTATCACAAACTA
CATCTGCCAGAAGCGTCTAGGCTGGACTATTCCCTCTTCTTCCCCTTCCT
CATCATCCACCACCACTCCATCCACATCCACCCCAACTTCCTCCATCACC
ACTTCCACAGAAACCACCATCTTCCCCTACAAGAACCCCATCCCCTTCGC
AGACCCATCCGATTACAAGATCCTGCGCAACGACTGGCCCTACGGTCTCG
CGCCCGGAATCTCGCACATTGTAGTGTGGTTGCGGACTCCCGTGGCAGTC
AAGGAAGAAAACGGGGACGTGACGGATGAGTCGCGGGCGTTGATAGAGGC
GTTTGTGCAGCGGACGTTTGTGGATGCGGTGGTGCGGGAAGAAGGGGTGA
GTGAGGCGGAGGCGAGGGATCGGGTGCTGTGGTTTAAGAATTGGGCGGCT
TTGCAGAGTGTGAGGAGTTTGGAACATGTTCATGTTCTGGTTAGGGATGT
GTCAGAGAGATTGTTGACTGAGTGGACCGGGGAGGAGGGGGTGAAGCGTT
AA back to topCoding sequence (CDS) from alignment at ch4:5048065..5049166+ >KJC3_006214-T1 ID=KJC3_006214-T1|Name=KJC3_006214-T1|organism=Aspergillus niger KJC3|type=CDS|length=1440bp|location=Sequence derived from alignment at ch4:5048065..5049166+ (Aspergillus niger KJC3)
ATGACTCCCGAGGAACCTCCGGCCTTCAATTTGACCGAGGTCGATCGTCA
AGTCCTCGTGCAGACCGACGAGGAGTTCGTGCTTCATGACTGGGAGGATC
TCAAGTCCATCATCGCACGCAACGATCTCGGCATCCTAAAACGGAAACCC
TCCGATCTAACCCGCTACCTGGCCTGGTCTCATCAAACCAAGCAACAGTA
CGGCACTATCACAAACTACATCTGCCAGAAGCGTCTAGGCTGGACTATTC
CCTCTTCTTCCCCTTCCTCATCATCCACCACCACTCCATCCACATCCACC
CCAACTTCCTCCATCACCACTTCCACAGAAACCACCATCTTCCCCTACAA
GAACCCCATCCCCTTCGCAGACCCATCCGATTACAAGATCCTGCGCAACG
ACTGGCCCTACGGTCTCGCGCCCGGAATCTCGCACATTGTAGTGTGGTTG
CGGACTCCCGTGGCAGTCAAGGAAGAAAACGGGGACGTGACGGATGAGTC
GCGGGCGTTGATAGAGGCGTTTGTGCAGCGGACGTTTGTGGATGCGGTGG
TGCGGGAAGAAGGGGTGAGTGAGGCGGAGGCGAGGGATCGGGTGCTGTGG
TTTAAGAATTGGGCGGCTTTGCAGAGTGTGAGGAGTTTGGAACATGTTCA
TGTTCTGGTTAGGGATGTGTCAGAGAGATTGTTGACTGAGTGGACCGGGG
AGGAGGGGGTGAAGCGTTAAATGACTCCCGAGGAACCTCCGGCCTTCAAT
TTGACCGAGGTCGATCGTCAAGTCCTCGTGCAGACCGACGAGGAGTTCGT
GCTTCATGACTGGGAGGATCTCAAGTCCATCATCGCACGCAACGATCTCG
GCATCCTAAAACGGAAACCCTCCGATCTAACCCGCTACCTGGCCTGGTCT
CATCAAACCAAGCAACAGTACGGCACTATCACAAACTACATCTGCCAGAA
GCGTCTAGGCTGGACTATTCCCTCTTCTTCCCCTTCCTCATCATCCACCA
CCACTCCATCCACATCCACCCCAACTTCCTCCATCACCACTTCCACAGAA
ACCACCATCTTCCCCTACAAGAACCCCATCCCCTTCGCAGACCCATCCGA
TTACAAGATCCTGCGCAACGACTGGCCCTACGGTCTCGCGCCCGGAATCT
CGCACATTGTAGTGTGGTTGCGGACTCCCGTGGCAGTCAAGGAAGAAAAC
GGGGACGTGACGGATGAGTCGCGGGCGTTGATAGAGGCGTTTGTGCAGCG
GACGTTTGTGGATGCGGTGGTGCGGGAAGAAGGGGTGAGTGAGGCGGAGG
CGAGGGATCGGGTGCTGTGGTTTAAGAATTGGGCGGCTTTGCAGAGTGTG
AGGAGTTTGGAACATGTTCATGTTCTGGTTAGGGATGTGTCAGAGAGATT
GTTGACTGAGTGGACCGGGGAGGAGGGGGTGAAGCGTTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR022036 |
| DBxref | PFAM:PF12239 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5048065..5049166 + |
|
