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KJC3_006217-T1, KJC3_006217-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006217-T1
Unique NameKJC3_006217-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5056133..5059269-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006217-T1 ID=KJC3_006217-T1|Name=KJC3_006217-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3137bp|location=Sequence derived from alignment at ch4:5056133..5059269- (Aspergillus niger KJC3)
CGATGATGGACTCGTGCTGCCAGTCTCGATTGGGTCCAATCACGTGCGAG
CGATGGCGCCATCGCCGCCTCCCGTCGCAACATCTCGACTTTCACTGAGG
AGTTACCGCTGCTGGTGGTTCTCTCCAGCGATCATCCCCCCCGAACTATC
GCTATTTGGCCGCTGTCGCCATCGCCGGGGTCAATTGCGGATCCCCGACT
TTGACTCAGATCCTCCAGACGATCGGCTATCTAGTTAGTTAGTGAGGGAG
CTGGAGTCGAGCTGGCTCTCGAGCCGAACTCCCATGGGCTCTCCGAGACG
CTAAGGTCGCCTGCCTGAACTCCGTCCATCCCGTCCTCTATCGTCACCTC
CCTTTCCAATCCCGCATTTTCAGGCCTTGGTCTTTCTGAACCCTGCTGCG
AGGCGCAATTGCTCCGCTCAGGTATTTTGGGTCCTATCATAGCGTCGAAT
TCCTGGAATAGCATTACTCCCATAGCTCAATCAATCTCACACTTCTCACT
GACGAAGCGTTGGGTATCAACCACCAGCTCCTCAGACCAGTCCTGGGGCA
CGATACCCCCCCTCTTGCCTTCCATCCTGCTTCTTCTGCAGGCTTCCTTG
TTTGCTACTGCAGGCGGTACGACAGGAAGCACGGTCGACGGAGACTTACA
CAGGTGTTACCTTACTAGGTCTTGTTGACCAGTCATCTGCAAACTCACCG
CCAGATCCTTCTTTTTCCAGCAGGCCCTCGTCGATCGCACATGAAACTCA
GAACTGACGAAATCAAGGACCTGATAATTTTCTGATTCCATAATTGTTAC
AAGCCCATGAGGTGATTGTGCACTAGATTTATGACTTCTTACGACATAGC
TACTGTAACGTTGCCCCGAAACTTACTCCTTCCGGCCGTTGAACGGCACT
GCCCTGAACCACTACACTCTTCTGCTTTATCGGGCATTATTGGGCCATTC
TGTCAGGCTATCACGCCAGCATTCCTCCTTTCATTATAATTTCCAATCAG
CGCCAATTACGCCGACCCCTTTTTCAGAATGTCAGCATCGGCGTCATTAT
CGGCCGGCAGTGATGCGTCTGGCCCCGGTTCGCCAGCAGGAGACCAGGGC
AACGCCCTGCCTCAGTTAGATTCTCTCATTTCTCACCTGGTGGCAGCAAA
ACGGTCTCTGTCATCCATCAATCACGTGTGGCGTGCGAATGAAATTGTAA
CTTCCGCTCGCTCTGCATTGGAAGAAAGTGTCGTGATTTCCGCACGGACT
GGCTTTCTCCGACGCGGGCTTAACAATCAACTACGGCTCCTTTACAGTGT
ACGCTCTGAGGTCGAGGAAGTTTCACTCAGGGGCCGGTCGGAGTTCGCCA
GTGTTTTGAAAAGTCTAGACACTGCCGATGCCCGACTGAGGAAGACCCTC
GACTCCTTACGGGATACAATTGTTCACGCTTCATTTCGTCCCGAGGGCGA
AGAACCCAGAAGCTTACATGACTTTGTGGATGAACGTGGAGTTGAGGAGC
TTCGTGCAGCTTTGAAGAGCTCAATTGATCGTACCAATGAGGCGCAGGCG
GAACTGGATACATCCAATTCCGCGTTCGATGATGAGCTCCAGTCCATCAA
GCAAGCTCTGGGTAATTACCGAGAAGCTACCAAGTTAGCTTCCTCATCCT
CCTCTTCTTCATCCGCGTCTAATTCAAGCCTGCCGTCATTGTCATCAATG
CCACCCATGTTACAGTCATTGGAGATGCATGCGCAGGAAATGGCCAATCT
GCTAGAGTCCTTGGTCCAGCACTTTGATCTTTGTGTAACTGCTGTCAAGC
ATACGGAAGGCGGTGGAGCTGCCGCGCGATCTATTACTGGGGATATGCCC
GCTGCCGTCACTGTCAGTGGCCGTGGAGTACCGAATATCGAGCAAGGCAT
TCATGACAACCTAAACGCCCCACTTGATCCCTTGAGTGAGTCTGACTACC
AAGAGATGGTGAATGTTTTGATCAAGGATGCAGCAGAGGCCGAAGACGTG
GTCATGGAAATCCAAGATCGTATCGGCGATATGGAATCAATTCTTGAGAA
CATTTTGTCTCAACGTGATGTTCTTCTCTCCATCTACAATGCCACTATTG
GCGTCTTCCGACACCTTTCATCTCTTGCAACTGCGCGTCTACCGGGTTAT
ATTGCTCAGGCACACAGCTTCACTCGTGTGTGGGGCGAAGAGCACGATCG
TATTAACGGTGGGCTAGCGGACTTGTCGGATCTTAATACCCTTTACGACG
GGTTTTTAGAAGCCTATGATGGCTTGATCCTCGAAGTGGCACGCCGACGG
CACGTACGACAGCGTGTGGAAAAGGTCCTTCGTGAAACGAAACACAAATT
GGATCAGCTGTACGAAGAGGATGTCAATGCTCGCGAAACGTTCCGAGTCG
AGCAAGGGGACTATTTGCCATCCGACATTTGGCCTGGTATCGGCCGCGAG
CCGATGCGAATAGAATTTCGACGCATATCCGGCGGTATTCTCAAGGGAGC
GCCTCCCGAACAGCCGGATGCACAAGACCAGCCGGCCGCTGAACCCAATG
AACCCCAGTCAGGGCCCTCTGAAACGACGGAGGAAGGGGAAATTATCCCA
CATTTACCGAAATCGCTGGTTGAAGAGGCCCTCCATCGCCTCAAGGCGAG
GAATAGACAAGCCATGTAGTGCTCTGGTATTTCAGAGAGCTCGTCAACCC
CGTGGTTGCCGCTTGGCAGTGTCAAAGGGGCTTTTCTTGGCAGTATGAAA
AATAGTAGATGACCTAGATGATGAAACACATTCAGGATTCGTCCTATCCG
ATACCGGCCATGCCTCTTTTGCCATGTCAGGTGGATTAACTATCCGTGAG
ACACATACTCCAGCGTATCTTCCTGACTCGCTAAGGATGTAAGTGCTTAT
AGAGTTGTCCATCGTGGCAGTTGGTAATGGACTGGAATGAGGATCAAAGA
GAGCTCTGATAGGTCGTCCAATCTTTCATATAAATGATCAAATATCTAGT
CGTCATCGATCATGCTTCTGTTTCAGGATATAGCAAACAAGTAGTTTTAA
GAATGGGCATTCTACTTAGTATGAACTTATGCTGCCGCCGAACATCAGTC
CCCTACTGACCATAGTGTCCCAGGGGGTCAGTATCAC
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Coding sequence (CDS) from alignment at ch4:5056133..5059269-

>KJC3_006217-T1 ID=KJC3_006217-T1|Name=KJC3_006217-T1|organism=Aspergillus niger KJC3|type=CDS|length=1641bp|location=Sequence derived from alignment at ch4:5056133..5059269- (Aspergillus niger KJC3)
ATGTCAGCATCGGCGTCATTATCGGCCGGCAGTGATGCGTCTGGCCCCGG
TTCGCCAGCAGGAGACCAGGGCAACGCCCTGCCTCAGTTAGATTCTCTCA
TTTCTCACCTGGTGGCAGCAAAACGGTCTCTGTCATCCATCAATCACGTG
TGGCGTGCGAATGAAATTGTAACTTCCGCTCGCTCTGCATTGGAAGAAAG
TGTCGTGATTTCCGCACGGACTGGCTTTCTCCGACGCGGGCTTAACAATC
AACTACGGCTCCTTTACAGTGTACGCTCTGAGGTCGAGGAAGTTTCACTC
AGGGGCCGGTCGGAGTTCGCCAGTGTTTTGAAAAGTCTAGACACTGCCGA
TGCCCGACTGAGGAAGACCCTCGACTCCTTACGGGATACAATTGTTCACG
CTTCATTTCGTCCCGAGGGCGAAGAACCCAGAAGCTTACATGACTTTGTG
GATGAACGTGGAGTTGAGGAGCTTCGTGCAGCTTTGAAGAGCTCAATTGA
TCGTACCAATGAGGCGCAGGCGGAACTGGATACATCCAATTCCGCGTTCG
ATGATGAGCTCCAGTCCATCAAGCAAGCTCTGGGTAATTACCGAGAAGCT
ACCAAGTTAGCTTCCTCATCCTCCTCTTCTTCATCCGCGTCTAATTCAAG
CCTGCCGTCATTGTCATCAATGCCACCCATGTTACAGTCATTGGAGATGC
ATGCGCAGGAAATGGCCAATCTGCTAGAGTCCTTGGTCCAGCACTTTGAT
CTTTGTGTAACTGCTGTCAAGCATACGGAAGGCGGTGGAGCTGCCGCGCG
ATCTATTACTGGGGATATGCCCGCTGCCGTCACTGTCAGTGGCCGTGGAG
TACCGAATATCGAGCAAGGCATTCATGACAACCTAAACGCCCCACTTGAT
CCCTTGAGTGAGTCTGACTACCAAGAGATGGTGAATGTTTTGATCAAGGA
TGCAGCAGAGGCCGAAGACGTGGTCATGGAAATCCAAGATCGTATCGGCG
ATATGGAATCAATTCTTGAGAACATTTTGTCTCAACGTGATGTTCTTCTC
TCCATCTACAATGCCACTATTGGCGTCTTCCGACACCTTTCATCTCTTGC
AACTGCGCGTCTACCGGGTTATATTGCTCAGGCACACAGCTTCACTCGTG
TGTGGGGCGAAGAGCACGATCGTATTAACGGTGGGCTAGCGGACTTGTCG
GATCTTAATACCCTTTACGACGGGTTTTTAGAAGCCTATGATGGCTTGAT
CCTCGAAGTGGCACGCCGACGGCACGTACGACAGCGTGTGGAAAAGGTCC
TTCGTGAAACGAAACACAAATTGGATCAGCTGTACGAAGAGGATGTCAAT
GCTCGCGAAACGTTCCGAGTCGAGCAAGGGGACTATTTGCCATCCGACAT
TTGGCCTGGTATCGGCCGCGAGCCGATGCGAATAGAATTTCGACGCATAT
CCGGCGGTATTCTCAAGGGAGCGCCTCCCGAACAGCCGGATGCACAAGAC
CAGCCGGCCGCTGAACCCAATGAACCCCAGTCAGGGCCCTCTGAAACGAC
GGAGGAAGGGGAAATTATCCCACATTTACCGAAATCGCTGGTTGAAGAGG
CCCTCCATCGCCTCAAGGCGAGGAATAGACAAGCCATGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006914autophagy
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATG17KJC3_006217Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006217-T1KJC3_006217-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006217-T1.cdsKJC3_006217-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006217-T1.utr3p1KJC3_006217-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006217-T1.exon2KJC3_006217-T1.exon2Aspergillus niger KJC3exon
KJC3_006217-T1.exon1KJC3_006217-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006217-T1.utr5p2KJC3_006217-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_006217-T1.utr5p1KJC3_006217-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR007240
DBxrefPFAM:PF04108
Productautophagy protein 17
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5056133..5059269 -
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