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KJC3_006224-T1, KJC3_006224-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006224-T1
Unique NameKJC3_006224-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5074893..5077135-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006224-T1 ID=KJC3_006224-T1|Name=KJC3_006224-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2243bp|location=Sequence derived from alignment at ch4:5074893..5077135- (Aspergillus niger KJC3)
TGGTGCTACCGTAGGAGTGCCACTAGTCGCAAGATAAATGGGGACTTCTG
AGTTAAACTCACGCAAGAGGAGAGGTGCGAATATTCGGAACGGGGCTCCG
GGAACTGCCCAGACTTGATGAATCCTTTCTTTCTGATCTCTACTTTCTTC
ATCGCAAACACGTGAGCATCCCCCTGGAACAAGCGTGGAAAACAATGGCA
ATCGATGCATTGAACGCAAGGACTGTTTCTTTTAACCAGTGAGGTTGCAA
ATCAGCTGCAGTCGGAGCAATGGTCAAAAAGTTAAGATGATGAGCATGAC
CGACGTGTTCCCCTTCACCGCAGACGGGATCTCCATGAGGTGCTTCTCCC
TAACATCCGAACCATCGCCGCCGGCAATGGCGTGCTCTGGAGCTATACAT
CATCATCATCCCCATCCCCATCCACTCCCTCCATCTCTTGTGCTCGTCGG
CATGTTACTTAACTCTGCCATCCCAACGTCTCACAGGACCATGGATCTCT
TGCTATCTGGGCCTGCCTTCGTGCCACGCTCTGCCCCCTTTTAAATCCGC
CCATCCTCGTCCCTCCTCGCTCACCGCATCGACCTCCCCGTCCGGGGTTT
TCTGGTATCTACCCGTCGATCGCCTCCCACCACCCCCCTTCTAGATGCAG
CACGTCGGGTCGGCGATTTGGGACCGCCAAATGACCGCCACACCCCACGT
CAACGTCCGCGATGCGGGTAGCACTCAGCCCCTGCTCAGTGCTGACGAGT
ACGATGCCTATTCGTGGGTGTTGCTTGAGGACCATCCGTTGTGCTCCCAT
CCTACGGATTGCTGTCCCGGTGTACTTTGGATGCTTCGGAAATGCTGTGC
CGCAGTGACCAAGAGATGGAGTGATCGCGCACTTACCCTGATTTGTGTGT
TCTTGATGTTCTTGTACGTCTTTACTATATCATTCAAAAGCAGTATAATG
AGCATATGATCAGGGTGTACTAACTCATTTCTAGAGTGGCGATTCAGTTT
CTCTCGCTCCTGCCATATGGCGTCTCCTATCTCTTCTTACACGAGCAATA
CAAAGCGCAGTCGGGGTTTATTCATTGGCCTGCGGAGTTTGAAGGCCAGC
CGGCTGCTTGTATATCCTACAACCCACGAGCTCATGCAGATGCCATCCAG
TACTCCCTTGCGGCGGGCTGTACTGGAGTCAAGGCCGATATCTGGCTACA
GGACGATGACATCCTTGTAGGCTCTTCAATGTCAAGCCTTAGGAACGAGT
CCACGCTGCGCAAGGTGTATCTGGAGCCACTACTGGACCACCTTGATGCT
ATGAGTTTAGCCGAAGCGCATCCTGACCAGGACTTCATGCCGGCCACAAC
AGGACTGTTTGGACAAGATGCACTGCAATTCAAATTGTACTTGGAAATCC
GGTCATCTGCAGAGAAGGTGTGGCCTCGTCTCTTGTCTGAATTGGCGCTT
CTCAGCGAACGTGGGTACCTTACCCATCGAAATGGGACGCAGGTCCTCCC
AGGGCCTATCACTGTTGTTCTGACAGGTCGGGAGCAAGTAGACTTTGATG
GACTCACCATCAGCCCTGAGAGCGTCGGCAATAGTGTCTTCTTGGATGAA
TCATACGTAATGGGGTCCGAAGCGTCTGCTGTTGTACAGACCTCGACGGA
AGAAGAAAGGGAGGCTTCTGAGCAGGACCCACGAGAAACATTTTCAGGCG
TCGACGGACAGACAGTCCTGGCCAATGCCCTCCAAAAGTACAGTGCCTCC
ATCAACTTCAGCGAGACCATTGGATCGCCCCATCGCGGGCGATTTTCTCG
GCAGCAGATCGAGAGGATCCAGGATCAAGTGCGAACTGCCCATCAAAAGG
GGCTGTTGGCTCGGTACGAAGGCATACCCTGCTACTCAGAAGGGATGCGC
CGCACTATTTGGCGTATCTTGGTTCACGAGGGGGCGGACCTCATTGAAGT
GGACTGGGCTGGGTGTGCTAGCCGAGGCTGGCGGCGATTCTTCAGCATCG
GGTCGCGGGGGACCGTCCCGGCCGCCAGCCACCCGCTGCATCCTCGCTGG
ACATGGGGCGAGTAATTGTGTCCCGTGAGGTGGAAATCCTTCTATATGAT
AATGATTAGTGCTTTTAATGCAAGTGATACCCGATACTGTACGCTAGATT
TGTTCTGCCAGTGAATGCTCTCAAGACCATGTAGTGTGCTAGCACAGCTA
CGTAGTGAGTGGCGATGACACCGACCACATGAACTAACTGAAG
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Coding sequence (CDS) from alignment at ch4:5074893..5077135-

>KJC3_006224-T1 ID=KJC3_006224-T1|Name=KJC3_006224-T1|organism=Aspergillus niger KJC3|type=CDS|length=2700bp|location=Sequence derived from alignment at ch4:5074893..5077135- (Aspergillus niger KJC3)
AGTGGCGATTCAGTTTCTCTCGCTCCTGCCATATGGCGTCTCCTATCTCT
TCTTACACGAGCAATACAAAGCGCAGTCGGGGTTTATTCATTGGCCTGCG
GAGTTTGAAGGCCAGCCGGCTGCTTGTATATCCTACAACCCACGAGCTCA
TGCAGATGCCATCCAGTACTCCCTTGCGGCGGGCTGTACTGGAGTCAAGG
CCGATATCTGGCTACAGGACGATGACATCCTTGTAGGCTCTTCAATGTCA
AGCCTTAGGAACGAGTCCACGCTGCGCAAGGTGTATCTGGAGCCACTACT
GGACCACCTTGATGCTATGAGTTTAGCCGAAGCGCATCCTGACCAGGACT
TCATGCCGGCCACAACAGGACTGTTTGGACAAGATGCACTGCAATTCAAA
TTGTACTTGGAAATCCGGTCATCTGCAGAGAAGGTGTGGCCTCGTCTCTT
GTCTGAATTGGCGCTTCTCAGCGAACGTGGGTACCTTACCCATCGAAATG
GGACGCAGGTCCTCCCAGGGCCTATCACTGTTGTTCTGACAGGTCGGGAG
CAAGTAGACTTTGATGGACTCACCATCAGCCCTGAGAGCGTCGGCAATAG
TGTCTTCTTGGATGAATCATACGTAATGGGGTCCGAAGCGTCTGCTGTTG
TACAGACCTCGACGGAAGAAGAAAGGGAGGCTTCTGAGCAGGACCCACGA
GAAACATTTTCAGGCGTCGACGGACAGACAGTCCTGGCCAATGCCCTCCA
AAAGTACAGTGCCTCCATCAACTTCAGCGAGACCATTGGATCGCCCCATC
GCGGGCGATTTTCTCGGCAGCAGATCGAGAGGATCCAGGATCAAGTGCGA
ACTGCCCATCAAAAGGGGCTGTTGGCTCGGTACGAAGGCATACCCTGCTA
CTCAGAAGGGATGCGCCGCACTATTTGGCGTATCTTGGTTCACGAGGGGG
CGGACCTCATTGAAGTGGACTGGGCTGGGTGTGCTAGCCGAGGCTGGCGG
CGATTCTTCAGCATCGGGTCGCGGGGGACCGTCCCGGCCGCCAGCCACCC
GCTGCATCCTCGCTGGACATGGGGCGAGTAAATGCAGCACGTCGGGTCGG
CGATTTGGGACCGCCAAATGACCGCCACACCCCACGTCAACGTCCGCGAT
GCGGGTAGCACTCAGCCCCTGCTCAGTGCTGACGAGTACGATGCCTATTC
GTGGGTGTTGCTTGAGGACCATCCGTTGTGCTCCCATCCTACGGATTGCT
GTCCCGGTGTACTTTGGATGCTTCGGAAATGCTGTGCCGCAGTGACCAAG
AGATGGAGTGATCGCGCACTTACCCTGATTTGTGTGTTCTTGATGTTCTT
AGTGGCGATTCAGTTTCTCTCGCTCCTGCCATATGGCGTCTCCTATCTCT
TCTTACACGAGCAATACAAAGCGCAGTCGGGGTTTATTCATTGGCCTGCG
GAGTTTGAAGGCCAGCCGGCTGCTTGTATATCCTACAACCCACGAGCTCA
TGCAGATGCCATCCAGTACTCCCTTGCGGCGGGCTGTACTGGAGTCAAGG
CCGATATCTGGCTACAGGACGATGACATCCTTGTAGGCTCTTCAATGTCA
AGCCTTAGGAACGAGTCCACGCTGCGCAAGGTGTATCTGGAGCCACTACT
GGACCACCTTGATGCTATGAGTTTAGCCGAAGCGCATCCTGACCAGGACT
TCATGCCGGCCACAACAGGACTGTTTGGACAAGATGCACTGCAATTCAAA
TTGTACTTGGAAATCCGGTCATCTGCAGAGAAGGTGTGGCCTCGTCTCTT
GTCTGAATTGGCGCTTCTCAGCGAACGTGGGTACCTTACCCATCGAAATG
GGACGCAGGTCCTCCCAGGGCCTATCACTGTTGTTCTGACAGGTCGGGAG
CAAGTAGACTTTGATGGACTCACCATCAGCCCTGAGAGCGTCGGCAATAG
TGTCTTCTTGGATGAATCATACGTAATGGGGTCCGAAGCGTCTGCTGTTG
TACAGACCTCGACGGAAGAAGAAAGGGAGGCTTCTGAGCAGGACCCACGA
GAAACATTTTCAGGCGTCGACGGACAGACAGTCCTGGCCAATGCCCTCCA
AAAGTACAGTGCCTCCATCAACTTCAGCGAGACCATTGGATCGCCCCATC
GCGGGCGATTTTCTCGGCAGCAGATCGAGAGGATCCAGGATCAAGTGCGA
ACTGCCCATCAAAAGGGGCTGTTGGCTCGGTACGAAGGCATACCCTGCTA
CTCAGAAGGGATGCGCCGCACTATTTGGCGTATCTTGGTTCACGAGGGGG
CGGACCTCATTGAAGTGGACTGGGCTGGGTGTGCTAGCCGAGGCTGGCGG
CGATTCTTCAGCATCGGGTCGCGGGGGACCGTCCCGGCCGCCAGCCACCC
GCTGCATCCTCGCTGGACATGGGGCGAGTAAATGCAGCACGTCGGGTCGG
CGATTTGGGACCGCCAAATGACCGCCACACCCCACGTCAACGTCCGCGAT
GCGGGTAGCACTCAGCCCCTGCTCAGTGCTGACGAGTACGATGCCTATTC
GTGGGTGTTGCTTGAGGACCATCCGTTGTGCTCCCATCCTACGGATTGCT
GTCCCGGTGTACTTTGGATGCTTCGGAAATGCTGTGCCGCAGTGACCAAG
AGATGGAGTGATCGCGCACTTACCCTGATTTGTGTGTTCTTGATGTTCTT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006224KJC3_006224Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006224-T1KJC3_006224-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006224-T1.cdsKJC3_006224-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006224-T1.utr3p1KJC3_006224-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006224-T1.exon2KJC3_006224-T1.exon2Aspergillus niger KJC3exon
KJC3_006224-T1.exon1KJC3_006224-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006224-T1.utr5p1KJC3_006224-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5074893..5077135 -
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