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KJC3_006227-T1, KJC3_006227-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006227-T1
Unique NameKJC3_006227-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5086024..5087804-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006227-T1 ID=KJC3_006227-T1|Name=KJC3_006227-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1781bp|location=Sequence derived from alignment at ch4:5086024..5087804- (Aspergillus niger KJC3)
GTACCAAGTAACTACCTCTCTCACCGTCAATCCGCTTCGCCATGAGAATG
CCCCATTGCAGCCTGCCTACTCCCTGCTCGTATTGGCTATTGTGATCAGT
CCTGCTGTATTCGCCGGAACGTTATTTGTAGCATACTAGAAACACCTGGA
TCCCTTCCTCTATCAGGTTATGTCTTCTGCTCCTGACGGGCAACCAATGC
TGCCTCTTCCTGGAGCCCCGTCTTCTTCATGGTCCCGATTTCGTGAGAGA
TTCGGTGCACTATTTCATGGCGCTGACCCCAGAGTCTGTGTTGCATTCTG
GCTACTTGGTAAGCCGTTGGCCGTCTTGTAGACACCGCGAACTGATAAGA
ACTACTCGTGGCTCACTGACCGGCATGCGTGACTCGCAACAGGATTGATC
AACAATGTCCTCTATGTTATCATTTTGTCCGCAGCCCTCGATTTAGTTGG
TCCTAGTGTCCCCAAGGGCGTCGTTCTTCTCGCAGACGTCATTCCCTCAT
TCGGAACCAAGCTGATAGCACCCTACTTTATTCATTTGGTTCCATATCCC
GCTCGAGTATTGTTCTGTGTGCTATGTTCAGCCGTGGGTATGCTTCTGGT
GGCCCTGAGCCCAGCGTATACAGATGGCGGTTCAATTTCCACCAAAATCG
CGGGCATTATTCTGGCGAGCTTGTCGAGCGGAGGAGGCGAACTGAGCTTC
CTAGCACTGACGCACTTCTACGGCCCGTTCAGTCTGGCAGCCTGGGGTAG
TGGTACCGGAGCCGCCGGGCTGGTCGGGGCTGGTGCGTACGCCGTCGCAA
CTACCTCTATGGGGCTCAGTGTCAGGTCGACACTCCTAGCAGCTGCCTGC
CTGCCAGCAATCATGGTTGTGAGCTTCTTCGCCATTCTGCCAAGAGCTCC
CATACGGACATTGGCCGCTGCACCTGTTGAGTATCGTGCAATTGACCAGG
AAGATCGGGATGACCTTCTGGATGAGCGGCACGGTCTACTCGGCTCCTCA
GCTCCCCCGAGCCGAAACAAGAGGAGCGACGCGAGTCATGAGCTCGGCTT
GCAGGTGTTCAAAGCTAACCTGCAGCGAGCTAGGGGACTTTTCTTTCCCT
TGTAAGTGCACGCTAGTATCATCAAGCAATAATTGGCATGCTTACATTTC
CGCGCAGCATGCTCCCCCTTCTGCTAGTCTATGTGGCCGAATACACAATC
AACCAAGGGGTTTCTCCGACCCTGCTGTTTCCACTTAAAGATTCGCCGTT
TGAACATTATCGTGCATTTTATCCCGCGTACAATGCGATCTATCAGGTTG
GTGTTTTCATCTCGCGATCGTCCACCCCTTTCTTTCGGATTCACGATCTT
TACCTTCCGTCACTGCTGCAAATCATCAATTTGGTCGTATTGACATTGCA
CGCCTTGTTTGACTTCATCCCGAGCGTGTACATAATATTTATAGTCATCT
TCTGGGAAGGGCTATTAGGGGGGCTGGTTTATGTCAATACATTCGCCGAA
ATCGGGGACCGGGTGCCGAAGGAAGACCGAGAATTCTCGCTCGGAGCGAC
GACTGTCAGCGATTCTGCCGGAATTTGTATAGCGGGCTTTCTGGGAATGG
CGTTTGAGGTCTGGTTGTGTGATTGGCAGGTCGCCCACGGTCGGGATTAT
TGCCGGAAACTATGAGCAGTAGAGAGAACCTTAGAATGATAGGGGAATGA
AATGATATACTACTATGCAATCCATATATAATAGATGATAATAATTTCTC
ATGCATTGTTAGCTTCAGTACGGAGTAGAGG
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Coding sequence (CDS) from alignment at ch4:5086024..5087804-

>KJC3_006227-T1 ID=KJC3_006227-T1|Name=KJC3_006227-T1|organism=Aspergillus niger KJC3|type=CDS|length=4068bp|location=Sequence derived from alignment at ch4:5086024..5087804- (Aspergillus niger KJC3)
CATGCTCCCCCTTCTGCTAGTCTATGTGGCCGAATACACAATCAACCAAG
GGGTTTCTCCGACCCTGCTGTTTCCACTTAAAGATTCGCCGTTTGAACAT
TATCGTGCATTTTATCCCGCGTACAATGCGATCTATCAGGTTGGTGTTTT
CATCTCGCGATCGTCCACCCCTTTCTTTCGGATTCACGATCTTTACCTTC
CGTCACTGCTGCAAATCATCAATTTGGTCGTATTGACATTGCACGCCTTG
TTTGACTTCATCCCGAGCGTGTACATAATATTTATAGTCATCTTCTGGGA
AGGGCTATTAGGGGGGCTGGTTTATGTCAATACATTCGCCGAAATCGGGG
ACCGGGTGCCGAAGGAAGACCGAGAATTCTCGCTCGGAGCGACGACTGTC
AGCGATTCTGCCGGAATTTGTATAGCGGGCTTTCTGGGAATGGCGTTTGA
GGTCTGGTTGTGTGATTGGCAGGTCGCCCACGGTCGGGATTATTGCCGGA
AACTATGAGATTGATCAACAATGTCCTCTATGTTATCATTTTGTCCGCAG
CCCTCGATTTAGTTGGTCCTAGTGTCCCCAAGGGCGTCGTTCTTCTCGCA
GACGTCATTCCCTCATTCGGAACCAAGCTGATAGCACCCTACTTTATTCA
TTTGGTTCCATATCCCGCTCGAGTATTGTTCTGTGTGCTATGTTCAGCCG
TGGGTATGCTTCTGGTGGCCCTGAGCCCAGCGTATACAGATGGCGGTTCA
ATTTCCACCAAAATCGCGGGCATTATTCTGGCGAGCTTGTCGAGCGGAGG
AGGCGAACTGAGCTTCCTAGCACTGACGCACTTCTACGGCCCGTTCAGTC
TGGCAGCCTGGGGTAGTGGTACCGGAGCCGCCGGGCTGGTCGGGGCTGGT
GCGTACGCCGTCGCAACTACCTCTATGGGGCTCAGTGTCAGGTCGACACT
CCTAGCAGCTGCCTGCCTGCCAGCAATCATGGTTGTGAGCTTCTTCGCCA
TTCTGCCAAGAGCTCCCATACGGACATTGGCCGCTGCACCTGTTGAGTAT
CGTGCAATTGACCAGGAAGATCGGGATGACCTTCTGGATGAGCGGCACGG
TCTACTCGGCTCCTCAGCTCCCCCGAGCCGAAACAAGAGGAGCGACGCGA
GTCATGAGCTCGGCTTGCAGGTGTTCAAAGCTAACCTGCAGCGAGCTAGG
GGACTTTTCTTTCCCTTATGTCTTCTGCTCCTGACGGGCAACCAATGCTG
CCTCTTCCTGGAGCCCCGTCTTCTTCATGGTCCCGATTTCGTGAGAGATT
CGGTGCACTATTTCATGGCGCTGACCCCAGAGTCTGTGTTGCATTCTGGC
TACTTGCATGCTCCCCCTTCTGCTAGTCTATGTGGCCGAATACACAATCA
ACCAAGGGGTTTCTCCGACCCTGCTGTTTCCACTTAAAGATTCGCCGTTT
GAACATTATCGTGCATTTTATCCCGCGTACAATGCGATCTATCAGGTTGG
TGTTTTCATCTCGCGATCGTCCACCCCTTTCTTTCGGATTCACGATCTTT
ACCTTCCGTCACTGCTGCAAATCATCAATTTGGTCGTATTGACATTGCAC
GCCTTGTTTGACTTCATCCCGAGCGTGTACATAATATTTATAGTCATCTT
CTGGGAAGGGCTATTAGGGGGGCTGGTTTATGTCAATACATTCGCCGAAA
TCGGGGACCGGGTGCCGAAGGAAGACCGAGAATTCTCGCTCGGAGCGACG
ACTGTCAGCGATTCTGCCGGAATTTGTATAGCGGGCTTTCTGGGAATGGC
GTTTGAGGTCTGGTTGTGTGATTGGCAGGTCGCCCACGGTCGGGATTATT
GCCGGAAACTATGAGATTGATCAACAATGTCCTCTATGTTATCATTTTGT
CCGCAGCCCTCGATTTAGTTGGTCCTAGTGTCCCCAAGGGCGTCGTTCTT
CTCGCAGACGTCATTCCCTCATTCGGAACCAAGCTGATAGCACCCTACTT
TATTCATTTGGTTCCATATCCCGCTCGAGTATTGTTCTGTGTGCTATGTT
CAGCCGTGGGTATGCTTCTGGTGGCCCTGAGCCCAGCGTATACAGATGGC
GGTTCAATTTCCACCAAAATCGCGGGCATTATTCTGGCGAGCTTGTCGAG
CGGAGGAGGCGAACTGAGCTTCCTAGCACTGACGCACTTCTACGGCCCGT
TCAGTCTGGCAGCCTGGGGTAGTGGTACCGGAGCCGCCGGGCTGGTCGGG
GCTGGTGCGTACGCCGTCGCAACTACCTCTATGGGGCTCAGTGTCAGGTC
GACACTCCTAGCAGCTGCCTGCCTGCCAGCAATCATGGTTGTGAGCTTCT
TCGCCATTCTGCCAAGAGCTCCCATACGGACATTGGCCGCTGCACCTGTT
GAGTATCGTGCAATTGACCAGGAAGATCGGGATGACCTTCTGGATGAGCG
GCACGGTCTACTCGGCTCCTCAGCTCCCCCGAGCCGAAACAAGAGGAGCG
ACGCGAGTCATGAGCTCGGCTTGCAGGTGTTCAAAGCTAACCTGCAGCGA
GCTAGGGGACTTTTCTTTCCCTTATGTCTTCTGCTCCTGACGGGCAACCA
ATGCTGCCTCTTCCTGGAGCCCCGTCTTCTTCATGGTCCCGATTTCGTGA
GAGATTCGGTGCACTATTTCATGGCGCTGACCCCAGAGTCTGTGTTGCAT
TCTGGCTACTTGCATGCTCCCCCTTCTGCTAGTCTATGTGGCCGAATACA
CAATCAACCAAGGGGTTTCTCCGACCCTGCTGTTTCCACTTAAAGATTCG
CCGTTTGAACATTATCGTGCATTTTATCCCGCGTACAATGCGATCTATCA
GGTTGGTGTTTTCATCTCGCGATCGTCCACCCCTTTCTTTCGGATTCACG
ATCTTTACCTTCCGTCACTGCTGCAAATCATCAATTTGGTCGTATTGACA
TTGCACGCCTTGTTTGACTTCATCCCGAGCGTGTACATAATATTTATAGT
CATCTTCTGGGAAGGGCTATTAGGGGGGCTGGTTTATGTCAATACATTCG
CCGAAATCGGGGACCGGGTGCCGAAGGAAGACCGAGAATTCTCGCTCGGA
GCGACGACTGTCAGCGATTCTGCCGGAATTTGTATAGCGGGCTTTCTGGG
AATGGCGTTTGAGGTCTGGTTGTGTGATTGGCAGGTCGCCCACGGTCGGG
ATTATTGCCGGAAACTATGAGATTGATCAACAATGTCCTCTATGTTATCA
TTTTGTCCGCAGCCCTCGATTTAGTTGGTCCTAGTGTCCCCAAGGGCGTC
GTTCTTCTCGCAGACGTCATTCCCTCATTCGGAACCAAGCTGATAGCACC
CTACTTTATTCATTTGGTTCCATATCCCGCTCGAGTATTGTTCTGTGTGC
TATGTTCAGCCGTGGGTATGCTTCTGGTGGCCCTGAGCCCAGCGTATACA
GATGGCGGTTCAATTTCCACCAAAATCGCGGGCATTATTCTGGCGAGCTT
GTCGAGCGGAGGAGGCGAACTGAGCTTCCTAGCACTGACGCACTTCTACG
GCCCGTTCAGTCTGGCAGCCTGGGGTAGTGGTACCGGAGCCGCCGGGCTG
GTCGGGGCTGGTGCGTACGCCGTCGCAACTACCTCTATGGGGCTCAGTGT
CAGGTCGACACTCCTAGCAGCTGCCTGCCTGCCAGCAATCATGGTTGTGA
GCTTCTTCGCCATTCTGCCAAGAGCTCCCATACGGACATTGGCCGCTGCA
CCTGTTGAGTATCGTGCAATTGACCAGGAAGATCGGGATGACCTTCTGGA
TGAGCGGCACGGTCTACTCGGCTCCTCAGCTCCCCCGAGCCGAAACAAGA
GGAGCGACGCGAGTCATGAGCTCGGCTTGCAGGTGTTCAAAGCTAACCTG
CAGCGAGCTAGGGGACTTTTCTTTCCCTTATGTCTTCTGCTCCTGACGGG
CAACCAATGCTGCCTCTTCCTGGAGCCCCGTCTTCTTCATGGTCCCGATT
TCGTGAGAGATTCGGTGCACTATTTCATGGCGCTGACCCCAGAGTCTGTG
TTGCATTCTGGCTACTTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
BTN1_1KJC3_006227Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006227-T1KJC3_006227-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006227-T1.cdsKJC3_006227-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006227-T1.utr3p1KJC3_006227-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006227-T1.exon3KJC3_006227-T1.exon3Aspergillus niger KJC3exon
KJC3_006227-T1.exon2KJC3_006227-T1.exon2Aspergillus niger KJC3exon
KJC3_006227-T1.exon1KJC3_006227-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006227-T1.utr5p1KJC3_006227-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09263C1V
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR018460
DBxrefInterPro:IPR003492
DBxrefPFAM:PF02487
Productbattenin CLN3 protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5086024..5087804 -
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