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KJC3_006233-T1, KJC3_006233-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006233-T1
Unique NameKJC3_006233-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5099786..5101355-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006233-T1 ID=KJC3_006233-T1|Name=KJC3_006233-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1570bp|location=Sequence derived from alignment at ch4:5099786..5101355- (Aspergillus niger KJC3)
GGGATGATAAGTATTTTACAGAGCCTATCTGTTCATTATTATTACTAAAA
AAGAGTCTGCATAGCTGCGTTTGTACATGCTATCTAAACAGATCTATGAT
ATAGAGTTTCGCTCTTCATCCATCATTCTCGACATCATATTCCCTCTAGC
ATACCATCCACCATGGTCAGATTATCAGACGAGGAGGTGATTCCTAACGA
AAAACCCCATAATCCAAACGGCACCTCCCCCTCACTCCCCCTCCCACCCA
TCGACCACGGTAAAGATGCCTGGTTCTTTCTGGCCGCCTGCTTCGTCATG
GAAGCCCTAGTCTGGGGGTTCGCCTTCACCTACGGTGTCTTCCAAGACTA
TTACAGCACACTGCCCATGTTCCAGAACTCCAATAACATTGCCATCATCG
GAACATGCGCCATGGTAAGCCTTTCCATCCCTCCCCTTCCCCTCCCCAAA
ACTAACACCAATTTCTAAACTCCAGGGAATAATGTATCTCGACCTCCCCA
TAATCTTCACCCTATACCGCACCTACCCTCATTATCAGCGTCTGGGCTGC
GCCCTCGGTGTCCTAACAATGTGTCTCTCTCTGGGCCTCTCCTCCCTGTC
CACAACCACCACTCACCTGATCATCTCCCAAGGCATCTTCTACGCCATCG
GCGGAAGCATCGCCTACTCGCCATGCATCCTCCTAATGGAAGACTGGTTC
GACCAACGCCGGGGCTTTGCCTTCGGCGTCATGTGGGCCGGCACCGGTTT
AGGCGGCGCGGTCCTCCCCATCGTTATGGAAACGCTACTCGATCGATACG
GGTTCCGGATAGCGTTAAGAGGGTTCGCAGTTGTGTTATTCGTGCTTACG
GCCCCGTTGGTATGGTTCGTCAAGCCTAGAGTGCCGCCTGCACTGCGGAG
TACCGGAGTGGACGGCGTAGTACAGCAGCAAGCACCAAGGCCGCGACTCA
AGGAAATCCGATTCCTCTGGACTTCAGGAACATTCCTCCTCTTTGAGCTG
TTCAACATGATCGAAGCAGTGGGGTACTTCCTCCCGTCTATCTACCTTCC
CTCGTACGCAAGAGCCATCGGCGTTCCATCAGGAAGCTTGGAAGCCCTCA
CAGTGATATTATTCAACGTTGCGTCTGTAGTAGGGTGCGTAGTCATGGGC
GCCATTATCGACCGATGGGACGTGACGACCTGCATTCTGGTCTCGACTGT
GGGATCAACGATAGGTGTGTTTCTCATCTGGGGATTTAGCGTCTCGCTGG
GTCCGCTGTTTGTGTTCGCTATCGTGTATGGGCTGTTTGCGGGCTCGTAT
ACGAGTACTTGGCCCGGGATCATGAGGGAGGTGGTCAGGAAGGATGGTGC
CGCCGAGTCGAGTATGGTGTTTGCTTGTTTGGCGGCTGGTAGGGGCGTCG
GGAATATTGTTTCAGGCCCGTTGAGTGAGGCGTTATTGGAGGGGATGCCA
TGGGCTGGAGAGTTGGGGTTTGGGTTTGGGACCGGGTATGGGAGTTTGAT
TGTCTTCACGGGGGTGACGGGGTTGGTTGGGGGTGGGAGTTGGGTTGTTA
GGAGGGCGGGGTGGCTGTGA
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Coding sequence (CDS) from alignment at ch4:5099786..5101355-

>KJC3_006233-T1 ID=KJC3_006233-T1|Name=KJC3_006233-T1|organism=Aspergillus niger KJC3|type=CDS|length=2694bp|location=Sequence derived from alignment at ch4:5099786..5101355- (Aspergillus niger KJC3)
GGAATAATGTATCTCGACCTCCCCATAATCTTCACCCTATACCGCACCTA
CCCTCATTATCAGCGTCTGGGCTGCGCCCTCGGTGTCCTAACAATGTGTC
TCTCTCTGGGCCTCTCCTCCCTGTCCACAACCACCACTCACCTGATCATC
TCCCAAGGCATCTTCTACGCCATCGGCGGAAGCATCGCCTACTCGCCATG
CATCCTCCTAATGGAAGACTGGTTCGACCAACGCCGGGGCTTTGCCTTCG
GCGTCATGTGGGCCGGCACCGGTTTAGGCGGCGCGGTCCTCCCCATCGTT
ATGGAAACGCTACTCGATCGATACGGGTTCCGGATAGCGTTAAGAGGGTT
CGCAGTTGTGTTATTCGTGCTTACGGCCCCGTTGGTATGGTTCGTCAAGC
CTAGAGTGCCGCCTGCACTGCGGAGTACCGGAGTGGACGGCGTAGTACAG
CAGCAAGCACCAAGGCCGCGACTCAAGGAAATCCGATTCCTCTGGACTTC
AGGAACATTCCTCCTCTTTGAGCTGTTCAACATGATCGAAGCAGTGGGGT
ACTTCCTCCCGTCTATCTACCTTCCCTCGTACGCAAGAGCCATCGGCGTT
CCATCAGGAAGCTTGGAAGCCCTCACAGTGATATTATTCAACGTTGCGTC
TGTAGTAGGGTGCGTAGTCATGGGCGCCATTATCGACCGATGGGACGTGA
CGACCTGCATTCTGGTCTCGACTGTGGGATCAACGATAGGTGTGTTTCTC
ATCTGGGGATTTAGCGTCTCGCTGGGTCCGCTGTTTGTGTTCGCTATCGT
GTATGGGCTGTTTGCGGGCTCGTATACGAGTACTTGGCCCGGGATCATGA
GGGAGGTGGTCAGGAAGGATGGTGCCGCCGAGTCGAGTATGGTGTTTGCT
TGTTTGGCGGCTGGTAGGGGCGTCGGGAATATTGTTTCAGGCCCGTTGAG
TGAGGCGTTATTGGAGGGGATGCCATGGGCTGGAGAGTTGGGGTTTGGGT
TTGGGACCGGGTATGGGAGTTTGATTGTCTTCACGGGGGTGACGGGGTTG
GTTGGGGGTGGGAGTTGGGTTGTTAGGAGGGCGGGGTGGCTGTGAATGGT
CAGATTATCAGACGAGGAGGTGATTCCTAACGAAAAACCCCATAATCCAA
ACGGCACCTCCCCCTCACTCCCCCTCCCACCCATCGACCACGGTAAAGAT
GCCTGGTTCTTTCTGGCCGCCTGCTTCGTCATGGAAGCCCTAGTCTGGGG
GTTCGCCTTCACCTACGGTGTCTTCCAAGACTATTACAGCACACTGCCCA
TGTTCCAGAACTCCAATAACATTGCCATCATCGGAACATGCGCCATGGGA
ATAATGTATCTCGACCTCCCCATAATCTTCACCCTATACCGCACCTACCC
TCATTATCAGCGTCTGGGCTGCGCCCTCGGTGTCCTAACAATGTGTCTCT
CTCTGGGCCTCTCCTCCCTGTCCACAACCACCACTCACCTGATCATCTCC
CAAGGCATCTTCTACGCCATCGGCGGAAGCATCGCCTACTCGCCATGCAT
CCTCCTAATGGAAGACTGGTTCGACCAACGCCGGGGCTTTGCCTTCGGCG
TCATGTGGGCCGGCACCGGTTTAGGCGGCGCGGTCCTCCCCATCGTTATG
GAAACGCTACTCGATCGATACGGGTTCCGGATAGCGTTAAGAGGGTTCGC
AGTTGTGTTATTCGTGCTTACGGCCCCGTTGGTATGGTTCGTCAAGCCTA
GAGTGCCGCCTGCACTGCGGAGTACCGGAGTGGACGGCGTAGTACAGCAG
CAAGCACCAAGGCCGCGACTCAAGGAAATCCGATTCCTCTGGACTTCAGG
AACATTCCTCCTCTTTGAGCTGTTCAACATGATCGAAGCAGTGGGGTACT
TCCTCCCGTCTATCTACCTTCCCTCGTACGCAAGAGCCATCGGCGTTCCA
TCAGGAAGCTTGGAAGCCCTCACAGTGATATTATTCAACGTTGCGTCTGT
AGTAGGGTGCGTAGTCATGGGCGCCATTATCGACCGATGGGACGTGACGA
CCTGCATTCTGGTCTCGACTGTGGGATCAACGATAGGTGTGTTTCTCATC
TGGGGATTTAGCGTCTCGCTGGGTCCGCTGTTTGTGTTCGCTATCGTGTA
TGGGCTGTTTGCGGGCTCGTATACGAGTACTTGGCCCGGGATCATGAGGG
AGGTGGTCAGGAAGGATGGTGCCGCCGAGTCGAGTATGGTGTTTGCTTGT
TTGGCGGCTGGTAGGGGCGTCGGGAATATTGTTTCAGGCCCGTTGAGTGA
GGCGTTATTGGAGGGGATGCCATGGGCTGGAGAGTTGGGGTTTGGGTTTG
GGACCGGGTATGGGAGTTTGATTGTCTTCACGGGGGTGACGGGGTTGGTT
GGGGGTGGGAGTTGGGTTGTTAGGAGGGCGGGGTGGCTGTGAATGGTCAG
ATTATCAGACGAGGAGGTGATTCCTAACGAAAAACCCCATAATCCAAACG
GCACCTCCCCCTCACTCCCCCTCCCACCCATCGACCACGGTAAAGATGCC
TGGTTCTTTCTGGCCGCCTGCTTCGTCATGGAAGCCCTAGTCTGGGGGTT
CGCCTTCACCTACGGTGTCTTCCAAGACTATTACAGCACACTGCCCATGT
TCCAGAACTCCAATAACATTGCCATCATCGGAACATGCGCCATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006233KJC3_006233Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006233-T1KJC3_006233-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006233-T1.cdsKJC3_006233-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006233-T1.exon2KJC3_006233-T1.exon2Aspergillus niger KJC3exon
KJC3_006233-T1.exon1KJC3_006233-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006233-T1.utr5p1KJC3_006233-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5099786..5101355 -
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