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KJC3_006238-T1, KJC3_006238-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006238-T1
Unique NameKJC3_006238-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5114714..5116057-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006238-T1 ID=KJC3_006238-T1|Name=KJC3_006238-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1344bp|location=Sequence derived from alignment at ch4:5114714..5116057- (Aspergillus niger KJC3)
GCCCGTTGCTGCTCGCTCAATCCCCTCCCCGACGCCCCGTCCGTCTCGCA
TCATATCTCACCTCCTCCACTTCCTCGAGGTCTCCGTTCCTAGATCACCA
TGTTCTCCGTTCGTGTCGCCCGCGCCGGCCTCCGTGCCACCGCCCAGCAG
TTCTCCGTTCCTCGCACTGCCGCCGTCAACGGTCTGAGGACCTATGCCAC
CCCGGCCCAGGATGTCAAGCCTCCTGTCTCCCTGTTCGGTGTTGACGGCA
CCTATGCCACCGCTCTGGTATGCGACACCATGATTCTACCCGTTGGTTGC
TAGTAGTGGCTCTGAGGTTCTCGCCCAGTCAATGGCACGGAAGAAAGGAA
GAAAACAAGAAAGAGGGGGAAAAGGCGGACGGGAGACCTAAGAAAACAAA
AACAGAGATTCACACGTCCTAGCAACCTCATGATCCCAGAAATGGCCAAC
TTCAAGAAAGCTCCCTGGCTAACCGATTGTTTGCGTTTCTGTGTATAGTA
CACTGCCTCTGCCAAGTCCGCCAACCTCGACCAGACCTCCAAGGCTCTCG
CCAGCCTCGGTCAGACCCTCAAGGCCGACCGCAAGCTGATCACCATCCTC
TCCGCCCCTACCCTCACTGTCGCCGACAAGCAGCAGATTGTCCAGGAGCT
GCAGAAGGTTGCTGGTGCCGACAAGGGCGACATCCTCAAGAACTTCCTCA
ACACTCTGGCTGAGAACAACCGTCTCGGTCTCCTCGAGGGTATCTGTGAG
AAGTTCTCCACTCTCATGGGTGCTCACCGTGGTGAGATCGAGCTGAACAT
CACCAGTGCTCAGGTACTTTCTTCTTTCGGGTTTTCGTATCGTGGGGCTT
TATACTGATTGTTGGGAAACAGGAGCTCGACACCAAGACTGTCAACCGTC
TCGAGAAGGCTGTTTCCAAGTCTGAGTTCAGCCAGGGCAAGAAGCTCAAG
GTTGTCACCAAGGTAATTACTAATTCTTTCCCCAATTGACGCTACGTATA
CTCATATGTTCAAATCAGGTCGACCCCGAGCTCGTCGGTGGCCTGGTCGT
TGAGATCGGTGACCGCACCATTGACCTCAGCGTCTCCTCCAAGATTGCCA
AGCTCAACAAGGCCCTCACCGACGCTTTGTAAATTACCTAAAGAATCCAC
CTAAAACACGAGGGATGCACATGTTCACATTAGGCGTCTCTTGAGCTTCC
ATATTTAGTTAACCCTTTTCTTTATATCAACTCCCTGTACCCCTACCGAA
TCGATCTACCTCATTCATCTATATTTCTTGCTAGCATGAGCTCTAGTTCT
GGAGTCGAATAGACAGAATTGAGTTTTATATCACCCATCTTGGC
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Coding sequence (CDS) from alignment at ch4:5114714..5116057-

>KJC3_006238-T1 ID=KJC3_006238-T1|Name=KJC3_006238-T1|organism=Aspergillus niger KJC3|type=CDS|length=2748bp|location=Sequence derived from alignment at ch4:5114714..5116057- (Aspergillus niger KJC3)
GTCGACCCCGAGCTCGTCGGTGGCCTGGTCGTTGAGATCGGTGACCGCAC
CATTGACCTCAGCGTCTCCTCCAAGATTGCCAAGCTCAACAAGGCCCTCA
CCGACGCTTTGTAAGAGCTCGACACCAAGACTGTCAACCGTCTCGAGAAG
GCTGTTTCCAAGTCTGAGTTCAGCCAGGGCAAGAAGCTCAAGGTTGTCAC
CAAGTACACTGCCTCTGCCAAGTCCGCCAACCTCGACCAGACCTCCAAGG
CTCTCGCCAGCCTCGGTCAGACCCTCAAGGCCGACCGCAAGCTGATCACC
ATCCTCTCCGCCCCTACCCTCACTGTCGCCGACAAGCAGCAGATTGTCCA
GGAGCTGCAGAAGGTTGCTGGTGCCGACAAGGGCGACATCCTCAAGAACT
TCCTCAACACTCTGGCTGAGAACAACCGTCTCGGTCTCCTCGAGGGTATC
TGTGAGAAGTTCTCCACTCTCATGGGTGCTCACCGTGGTGAGATCGAGCT
GAACATCACCAGTGCTCAGATGTTCTCCGTTCGTGTCGCCCGCGCCGGCC
TCCGTGCCACCGCCCAGCAGTTCTCCGTTCCTCGCACTGCCGCCGTCAAC
GGTCTGAGGACCTATGCCACCCCGGCCCAGGATGTCAAGCCTCCTGTCTC
CCTGTTCGGTGTTGACGGCACCTATGCCACCGCTCTGGTCGACCCCGAGC
TCGTCGGTGGCCTGGTCGTTGAGATCGGTGACCGCACCATTGACCTCAGC
GTCTCCTCCAAGATTGCCAAGCTCAACAAGGCCCTCACCGACGCTTTGTA
AGAGCTCGACACCAAGACTGTCAACCGTCTCGAGAAGGCTGTTTCCAAGT
CTGAGTTCAGCCAGGGCAAGAAGCTCAAGGTTGTCACCAAGTACACTGCC
TCTGCCAAGTCCGCCAACCTCGACCAGACCTCCAAGGCTCTCGCCAGCCT
CGGTCAGACCCTCAAGGCCGACCGCAAGCTGATCACCATCCTCTCCGCCC
CTACCCTCACTGTCGCCGACAAGCAGCAGATTGTCCAGGAGCTGCAGAAG
GTTGCTGGTGCCGACAAGGGCGACATCCTCAAGAACTTCCTCAACACTCT
GGCTGAGAACAACCGTCTCGGTCTCCTCGAGGGTATCTGTGAGAAGTTCT
CCACTCTCATGGGTGCTCACCGTGGTGAGATCGAGCTGAACATCACCAGT
GCTCAGATGTTCTCCGTTCGTGTCGCCCGCGCCGGCCTCCGTGCCACCGC
CCAGCAGTTCTCCGTTCCTCGCACTGCCGCCGTCAACGGTCTGAGGACCT
ATGCCACCCCGGCCCAGGATGTCAAGCCTCCTGTCTCCCTGTTCGGTGTT
GACGGCACCTATGCCACCGCTCTGGTCGACCCCGAGCTCGTCGGTGGCCT
GGTCGTTGAGATCGGTGACCGCACCATTGACCTCAGCGTCTCCTCCAAGA
TTGCCAAGCTCAACAAGGCCCTCACCGACGCTTTGTAAGAGCTCGACACC
AAGACTGTCAACCGTCTCGAGAAGGCTGTTTCCAAGTCTGAGTTCAGCCA
GGGCAAGAAGCTCAAGGTTGTCACCAAGTACACTGCCTCTGCCAAGTCCG
CCAACCTCGACCAGACCTCCAAGGCTCTCGCCAGCCTCGGTCAGACCCTC
AAGGCCGACCGCAAGCTGATCACCATCCTCTCCGCCCCTACCCTCACTGT
CGCCGACAAGCAGCAGATTGTCCAGGAGCTGCAGAAGGTTGCTGGTGCCG
ACAAGGGCGACATCCTCAAGAACTTCCTCAACACTCTGGCTGAGAACAAC
CGTCTCGGTCTCCTCGAGGGTATCTGTGAGAAGTTCTCCACTCTCATGGG
TGCTCACCGTGGTGAGATCGAGCTGAACATCACCAGTGCTCAGATGTTCT
CCGTTCGTGTCGCCCGCGCCGGCCTCCGTGCCACCGCCCAGCAGTTCTCC
GTTCCTCGCACTGCCGCCGTCAACGGTCTGAGGACCTATGCCACCCCGGC
CCAGGATGTCAAGCCTCCTGTCTCCCTGTTCGGTGTTGACGGCACCTATG
CCACCGCTCTGGTCGACCCCGAGCTCGTCGGTGGCCTGGTCGTTGAGATC
GGTGACCGCACCATTGACCTCAGCGTCTCCTCCAAGATTGCCAAGCTCAA
CAAGGCCCTCACCGACGCTTTGTAAGAGCTCGACACCAAGACTGTCAACC
GTCTCGAGAAGGCTGTTTCCAAGTCTGAGTTCAGCCAGGGCAAGAAGCTC
AAGGTTGTCACCAAGTACACTGCCTCTGCCAAGTCCGCCAACCTCGACCA
GACCTCCAAGGCTCTCGCCAGCCTCGGTCAGACCCTCAAGGCCGACCGCA
AGCTGATCACCATCCTCTCCGCCCCTACCCTCACTGTCGCCGACAAGCAG
CAGATTGTCCAGGAGCTGCAGAAGGTTGCTGGTGCCGACAAGGGCGACAT
CCTCAAGAACTTCCTCAACACTCTGGCTGAGAACAACCGTCTCGGTCTCC
TCGAGGGTATCTGTGAGAAGTTCTCCACTCTCATGGGTGCTCACCGTGGT
GAGATCGAGCTGAACATCACCAGTGCTCAGATGTTCTCCGTTCGTGTCGC
CCGCGCCGGCCTCCGTGCCACCGCCCAGCAGTTCTCCGTTCCTCGCACTG
CCGCCGTCAACGGTCTGAGGACCTATGCCACCCCGGCCCAGGATGTCAAG
CCTCCTGTCTCCCTGTTCGGTGTTGACGGCACCTATGCCACCGCTCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0046933proton-transporting ATP synthase activity, rotational mechanism
Vocabulary: Biological Process
TermDefinition
GO:0015986ATP synthesis coupled proton transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATP5KJC3_006238Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006238-T1KJC3_006238-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006238-T1.cdsKJC3_006238-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006238-T1.utr3p1KJC3_006238-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006238-T1.exon4KJC3_006238-T1.exon4Aspergillus niger KJC3exon
KJC3_006238-T1.exon3KJC3_006238-T1.exon3Aspergillus niger KJC3exon
KJC3_006238-T1.exon2KJC3_006238-T1.exon2Aspergillus niger KJC3exon
KJC3_006238-T1.exon1KJC3_006238-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006238-T1.utr5p1KJC3_006238-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264KDO
DBxrefInterPro:IPR020781
DBxrefInterPro:IPR026015
DBxrefInterPro:IPR000711
DBxrefPFAM:PF00213
ProductATP synthase F0 subcomplex subunit OSCP atp5
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5114714..5116057 -
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