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KJC3_006239-T1, KJC3_006239-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006239-T1
Unique NameKJC3_006239-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5116224..5118003-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006239-T1 ID=KJC3_006239-T1|Name=KJC3_006239-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1780bp|location=Sequence derived from alignment at ch4:5116224..5118003- (Aspergillus niger KJC3)
CGTGGAGAAGGCAGGCCGGAAATGCGATCGATATAGATCGCCCTCCATCG
CCCCTCGTTGGTAGTTGGGTGTGTTCCTTTCGCTTGGTTTTCATTTCCTA
AGGTTGTTGTCGCGCTTCTCTACACTTGGTCGGAGCGGCTCCATCGCTGA
TACTCCAACTTCGCCTCCTACTACCTACCACCTCTCGTCCCCTCCTCTCA
TTCCGCCAGCCGGTCTGTTGCTCCCCTCATCGGCGCATCCTACCATTGCA
CTGATTCAGGTATTCCCAAAAGAGGTAAGGCAGTAAGACAGGGACTGGCG
TCTTTTCCCAGATTTCCCCCCCGTCGAGTCCATACACTTGACTGACAGGC
GCTGACTTGGTTGGCATCGGCATGCAGGCGCATTCTCCAACGGAACTCTA
CACAACACCTTGTTTCGACCAAGAACACCGGAATAGCACCCGTGACTTCG
TATTTGACTGAAGGGAGGAACCAAAGGGAAAGAAAAGAAATTTGGCAAGG
AGATGGCATCCTTCATCACAACCATGTCTGTCCCCATCCTTTCTGTTTCT
TCTTCGTCCGATGCTGGACAACCTGCCCCGCCATCCTCATCTTCTCCCCA
ACCTTCGCTCCCCTCCTCTCCGTCCATCATCTCCCCTTCGGTCTGCTATG
GCACCGTTCAGACTTTTCCTGGCCCCTTCTCTGAGCCCCCGTCTTATCTG
TCCCCAGCAGTACGCGCGCTGAAATATGATACCGCTGGACTGACACCTCC
CAGCAACGCTCGGACCCGCGCTCCCTTCAAGCCGCGGTCGGCAGCCAAGG
GCACCACTAGCTATCAACTGAGACAGTTCGCGGAAGCGACCTTGGGAAGT
GGAAGCTTACGGAAGGCCGTGAAGCTTCCAGAAGGCGAGGATCTTAATGA
GTGGCTTGCAGTTAATGGTAAACATACTCTCGAGGCTTGCAGCAGCGACA
GCATCAAACACATACTAACAGTTTGTTGCAATGTGCAACAGTGGTCGACT
TCTATAACCAGATCAACTTGCTCTATGGCGCGATCACAGAGTTCTGTTCT
CCGCAATCATGTCCGGAAATGAAAGCAACTGATGAGTACGGAGCTAGCCC
TGATACCTGCCGAAGCAACACAGAACTGACGATGGATATCCAGATTCGAA
TATCTCTGGCAAGATTCGGAAAACTACAAGCGACCGACGAAGATGTCGGC
CCCAGAATACATCGAACATTTGATGAGCTGGGTACAAAGCAGTATCGACA
ACGAGCAAATTTTCCCCAGCAGGCTCGGTGAGTAGCGTCTTGAGAGAGAG
CCGTGAAAGGAGGCTACGTAAACTACGATTGCGATGAGCAGACACTAATA
TGAGATGCTACATCACAGGCGTCCCCTTCCCCAAGGTGTTCCCGAGCCTT
GTGCGTCAGATCTTTAAGCGGATGTATCGCGTATATGCACACATTTACTG
CCACCACTACCCGGTTGTGGTCCATCTCGGACTGGAGCCTCATCTGAATA
CCAGCTTCAAGCATTACGTGCTCTTCATTGACGAGCACCGCCTGGCTAGT
GGGAAGGATTTCTGGGGTCCGTTGGGAGATCTTGTGGATAGCATGCTGCG
CAGTGATTGAAGATCGCATCGGTCGAATGGCTAGACGGCCGTGAAGCAAA
GAGGTTGAGAGGATGGCGTTTCGGGTGTTGGCATTCGGGAGGGCGCAATT
CACTCGTAGAGGCAGTCTGGCGTTACATAGCGTGTGCGACTGTAATTTGC
ATTTTGAGAACGAATACTGAAATGAAGATT
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Coding sequence (CDS) from alignment at ch4:5116224..5118003-

>KJC3_006239-T1 ID=KJC3_006239-T1|Name=KJC3_006239-T1|organism=Aspergillus niger KJC3|type=CDS|length=3540bp|location=Sequence derived from alignment at ch4:5116224..5118003- (Aspergillus niger KJC3)
GCGTCCCCTTCCCCAAGGTGTTCCCGAGCCTTGTGCGTCAGATCTTTAAG
CGGATGTATCGCGTATATGCACACATTTACTGCCACCACTACCCGGTTGT
GGTCCATCTCGGACTGGAGCCTCATCTGAATACCAGCTTCAAGCATTACG
TGCTCTTCATTGACGAGCACCGCCTGGCTAGTGGGAAGGATTTCTGGGGT
CCGTTGGGAGATCTTGTGGATAGCATGCTGCGCAGTGATTGAATTCGAAT
ATCTCTGGCAAGATTCGGAAAACTACAAGCGACCGACGAAGATGTCGGCC
CCAGAATACATCGAACATTTGATGAGCTGGGTACAAAGCAGTATCGACAA
CGAGCAAATTTTCCCCAGCAGGCTCGTGGTCGACTTCTATAACCAGATCA
ACTTGCTCTATGGCGCGATCACAGAGTTCTGTTCTCCGCAATCATGTCCG
GAAATGAAAGCAACTGATGAATGGCATCCTTCATCACAACCATGTCTGTC
CCCATCCTTTCTGTTTCTTCTTCGTCCGATGCTGGACAACCTGCCCCGCC
ATCCTCATCTTCTCCCCAACCTTCGCTCCCCTCCTCTCCGTCCATCATCT
CCCCTTCGGTCTGCTATGGCACCGTTCAGACTTTTCCTGGCCCCTTCTCT
GAGCCCCCGTCTTATCTGTCCCCAGCAGTACGCGCGCTGAAATATGATAC
CGCTGGACTGACACCTCCCAGCAACGCTCGGACCCGCGCTCCCTTCAAGC
CGCGGTCGGCAGCCAAGGGCACCACTAGCTATCAACTGAGACAGTTCGCG
GAAGCGACCTTGGGAAGTGGAAGCTTACGGAAGGCCGTGAAGCTTCCAGA
AGGCGAGGATCTTAATGAGTGGCTTGCAGTTAATGGCGTCCCCTTCCCCA
AGGTGTTCCCGAGCCTTGTGCGTCAGATCTTTAAGCGGATGTATCGCGTA
TATGCACACATTTACTGCCACCACTACCCGGTTGTGGTCCATCTCGGACT
GGAGCCTCATCTGAATACCAGCTTCAAGCATTACGTGCTCTTCATTGACG
AGCACCGCCTGGCTAGTGGGAAGGATTTCTGGGGTCCGTTGGGAGATCTT
GTGGATAGCATGCTGCGCAGTGATTGAATTCGAATATCTCTGGCAAGATT
CGGAAAACTACAAGCGACCGACGAAGATGTCGGCCCCAGAATACATCGAA
CATTTGATGAGCTGGGTACAAAGCAGTATCGACAACGAGCAAATTTTCCC
CAGCAGGCTCGTGGTCGACTTCTATAACCAGATCAACTTGCTCTATGGCG
CGATCACAGAGTTCTGTTCTCCGCAATCATGTCCGGAAATGAAAGCAACT
GATGAATGGCATCCTTCATCACAACCATGTCTGTCCCCATCCTTTCTGTT
TCTTCTTCGTCCGATGCTGGACAACCTGCCCCGCCATCCTCATCTTCTCC
CCAACCTTCGCTCCCCTCCTCTCCGTCCATCATCTCCCCTTCGGTCTGCT
ATGGCACCGTTCAGACTTTTCCTGGCCCCTTCTCTGAGCCCCCGTCTTAT
CTGTCCCCAGCAGTACGCGCGCTGAAATATGATACCGCTGGACTGACACC
TCCCAGCAACGCTCGGACCCGCGCTCCCTTCAAGCCGCGGTCGGCAGCCA
AGGGCACCACTAGCTATCAACTGAGACAGTTCGCGGAAGCGACCTTGGGA
AGTGGAAGCTTACGGAAGGCCGTGAAGCTTCCAGAAGGCGAGGATCTTAA
TGAGTGGCTTGCAGTTAATGGCGTCCCCTTCCCCAAGGTGTTCCCGAGCC
TTGTGCGTCAGATCTTTAAGCGGATGTATCGCGTATATGCACACATTTAC
TGCCACCACTACCCGGTTGTGGTCCATCTCGGACTGGAGCCTCATCTGAA
TACCAGCTTCAAGCATTACGTGCTCTTCATTGACGAGCACCGCCTGGCTA
GTGGGAAGGATTTCTGGGGTCCGTTGGGAGATCTTGTGGATAGCATGCTG
CGCAGTGATTGAATTCGAATATCTCTGGCAAGATTCGGAAAACTACAAGC
GACCGACGAAGATGTCGGCCCCAGAATACATCGAACATTTGATGAGCTGG
GTACAAAGCAGTATCGACAACGAGCAAATTTTCCCCAGCAGGCTCGTGGT
CGACTTCTATAACCAGATCAACTTGCTCTATGGCGCGATCACAGAGTTCT
GTTCTCCGCAATCATGTCCGGAAATGAAAGCAACTGATGAATGGCATCCT
TCATCACAACCATGTCTGTCCCCATCCTTTCTGTTTCTTCTTCGTCCGAT
GCTGGACAACCTGCCCCGCCATCCTCATCTTCTCCCCAACCTTCGCTCCC
CTCCTCTCCGTCCATCATCTCCCCTTCGGTCTGCTATGGCACCGTTCAGA
CTTTTCCTGGCCCCTTCTCTGAGCCCCCGTCTTATCTGTCCCCAGCAGTA
CGCGCGCTGAAATATGATACCGCTGGACTGACACCTCCCAGCAACGCTCG
GACCCGCGCTCCCTTCAAGCCGCGGTCGGCAGCCAAGGGCACCACTAGCT
ATCAACTGAGACAGTTCGCGGAAGCGACCTTGGGAAGTGGAAGCTTACGG
AAGGCCGTGAAGCTTCCAGAAGGCGAGGATCTTAATGAGTGGCTTGCAGT
TAATGGCGTCCCCTTCCCCAAGGTGTTCCCGAGCCTTGTGCGTCAGATCT
TTAAGCGGATGTATCGCGTATATGCACACATTTACTGCCACCACTACCCG
GTTGTGGTCCATCTCGGACTGGAGCCTCATCTGAATACCAGCTTCAAGCA
TTACGTGCTCTTCATTGACGAGCACCGCCTGGCTAGTGGGAAGGATTTCT
GGGGTCCGTTGGGAGATCTTGTGGATAGCATGCTGCGCAGTGATTGAATT
CGAATATCTCTGGCAAGATTCGGAAAACTACAAGCGACCGACGAAGATGT
CGGCCCCAGAATACATCGAACATTTGATGAGCTGGGTACAAAGCAGTATC
GACAACGAGCAAATTTTCCCCAGCAGGCTCGTGGTCGACTTCTATAACCA
GATCAACTTGCTCTATGGCGCGATCACAGAGTTCTGTTCTCCGCAATCAT
GTCCGGAAATGAAAGCAACTGATGAATGGCATCCTTCATCACAACCATGT
CTGTCCCCATCCTTTCTGTTTCTTCTTCGTCCGATGCTGGACAACCTGCC
CCGCCATCCTCATCTTCTCCCCAACCTTCGCTCCCCTCCTCTCCGTCCAT
CATCTCCCCTTCGGTCTGCTATGGCACCGTTCAGACTTTTCCTGGCCCCT
TCTCTGAGCCCCCGTCTTATCTGTCCCCAGCAGTACGCGCGCTGAAATAT
GATACCGCTGGACTGACACCTCCCAGCAACGCTCGGACCCGCGCTCCCTT
CAAGCCGCGGTCGGCAGCCAAGGGCACCACTAGCTATCAACTGAGACAGT
TCGCGGAAGCGACCTTGGGAAGTGGAAGCTTACGGAAGGCCGTGAAGCTT
CCAGAAGGCGAGGATCTTAATGAGTGGCTTGCAGTTAATG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MOB11KJC3_006239Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006239-T1KJC3_006239-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006239-T1.cdsKJC3_006239-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006239-T1.utr3p1KJC3_006239-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006239-T1.exon5KJC3_006239-T1.exon5Aspergillus niger KJC3exon
KJC3_006239-T1.exon4KJC3_006239-T1.exon4Aspergillus niger KJC3exon
KJC3_006239-T1.exon3KJC3_006239-T1.exon3Aspergillus niger KJC3exon
KJC3_006239-T1.exon2KJC3_006239-T1.exon2Aspergillus niger KJC3exon
KJC3_006239-T1.exon1KJC3_006239-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006239-T1.utr5p2KJC3_006239-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_006239-T1.utr5p1KJC3_006239-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036703
DBxrefInterPro:IPR005301
DBxrefPFAM:PF03637
ProductMaintenance of ploidy protein mob1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5116224..5118003 -
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