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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5128888..5130586- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006243-T1 ID=KJC3_006243-T1|Name=KJC3_006243-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1699bp|location=Sequence derived from alignment at ch4:5128888..5130586- (Aspergillus niger KJC3)
ATGGTCTCCCTCGGATCAGCCATCGGAATGGGCATGTGGCTGGGAAGTGG
GACATCTCTAGTCGATGGTGGCCCTGCGAGTCTTTTCATTGGATATCTGA
TCAGCAGCTCCATGGTATGGTCAGTCAGTCAATCCATTGGTGAGATGGCT
GTCATGTACCCCCTGCCATCTGCTTTCGTACAGTGGTCTACCATCTTCGT
CAGTCCTGCTGCTGGGTTTGCCCTGGGATGGGGATACTGGTTTTCGTACT
GGATCACCATAGCCAATGAACTCCAGGTATTACCTACCCTACCATTTGGA
TCTATCATCCTAGGCTTATCTGTTCTGTCGAATCCAGGGCATCATAACTA
TCCTCAACTACTGGACCGATGAAGTCCCCAAGGTTGCATGGATATCCATC
TTCTGGGTCGTCATCATTCTCATCAATATTTGGGTCGTCAAGCTATTCGC
CGAAGTGGAGGTAGTTGCATCGACGGTGAAATTCGGCTGGATGTTAGTTA
TCATCCCTGCCCTCATCGGTATGTTCTTCAATATCTATTCATTCCAGCTA
CATCGACATCAACATCAAAACAAATACTAACATGCAGCTACCTTCAAACT
CAGTAATCACCGCGGGTGGCTCCCCCCAAGAAGGCCCAATCGGCTTCCGC
TACTGGAACGAGCAAGCATTCCGAAACGGCTTCAAAGGCTTCCTCAGCAT
CCTCCCAACCTGCATCTTCGCCATGGCGGGGACAGAAAGCGCAGCAATGG
TAGCCAGCGAGGTAGCTAACCCCCGAATATCGGTTCCAAAAGCCGTGAGA
TCCATATGGATTCGTCTTGGGCTCTTCTACATTCTCGGCAGCCTCATGAT
TACATTAAGCGTTGATCCAACCGACCCAAACTTGTTCGGATCGTCAGGAA
GCAATGCTTCGCCTTTCGTTATTGCCTTCAAAAATGCAGGAATTCCTGTG
ATGGCGCATATTACCAACGCCGTGATCTTCATTTCGATGCTCTCGACGGG
GAGTATCTCTGGCTATGGTGGCTCCCGGATGCTGATGGGGCTGGCGCATG
TGGGTATGAATCATAGGGTATGTGTGCTTGGTTTGCAGTAATGAGCTCGT
TCGTCAAATCGACTAATAGATTGCCCAGATATTCGGCAAAGCAGACCGCA
TCGGCCGCCCATGGGCCGGCTACATCGCCACGATCGGGATAGGAGGCGCC
CTCTCGTACATCAACGTATCCAACACCGGAGCGCAGGTATTCCAATGGTT
ATCCAACCTAGTCTCGCTCCTCACGCTCTTCGGATGGGGCCTGATTTCTC
TTTCTCATCTACGATTCCGATATAGCTGGAAGGTTCAAGGTCGGGATGAG
ACCCACCTTCCATGGAGAACGATGGCATATCCCTATGCGACATGGTGGGC
ACTGATCTGGTGTATTGTATTGATCGGGTTGGAGCTTTACTTGAGCATTT
GGCCCCTAGGTAAATCGACGAGCGCGAAGAACTTCTTTGCGAGCTATATC
AGTGTGATTGCTGTCATTATCATCTGGATTGGCGCGCAGATTTGGTATCG
CGGCCCGCTCTGGGTGGATGCGAGGGAGATTGACCTTGATAGATGGCGAC
GCTACTATGCGGATCGGGTTGACGAGGAGTCAATTCCGGTGAGAAAGTCG
CTGGTAAGGAGGATGAAGGCGCTTATTGAGTGAACTTGTTAGGTTTTCG back to topCoding sequence (CDS) from alignment at ch4:5128888..5130586- >KJC3_006243-T1 ID=KJC3_006243-T1|Name=KJC3_006243-T1|organism=Aspergillus niger KJC3|type=CDS|length=5904bp|location=Sequence derived from alignment at ch4:5128888..5130586- (Aspergillus niger KJC3)
ATATTCGGCAAAGCAGACCGCATCGGCCGCCCATGGGCCGGCTACATCGC
CACGATCGGGATAGGAGGCGCCCTCTCGTACATCAACGTATCCAACACCG
GAGCGCAGGTATTCCAATGGTTATCCAACCTAGTCTCGCTCCTCACGCTC
TTCGGATGGGGCCTGATTTCTCTTTCTCATCTACGATTCCGATATAGCTG
GAAGGTTCAAGGTCGGGATGAGACCCACCTTCCATGGAGAACGATGGCAT
ATCCCTATGCGACATGGTGGGCACTGATCTGGTGTATTGTATTGATCGGG
TTGGAGCTTTACTTGAGCATTTGGCCCCTAGGTAAATCGACGAGCGCGAA
GAACTTCTTTGCGAGCTATATCAGTGTGATTGCTGTCATTATCATCTGGA
TTGGCGCGCAGATTTGGTATCGCGGCCCGCTCTGGGTGGATGCGAGGGAG
ATTGACCTTGATAGATGGCGACGCTACTATGCGGATCGGGTTGACGAGGA
GTCAATTCCGGTGAGAAAGTCGCTGGTAAGGAGGATGAAGGCGCTTATTG
AGTGATAATCACCGCGGGTGGCTCCCCCCAAGAAGGCCCAATCGGCTTCC
GCTACTGGAACGAGCAAGCATTCCGAAACGGCTTCAAAGGCTTCCTCAGC
ATCCTCCCAACCTGCATCTTCGCCATGGCGGGGACAGAAAGCGCAGCAAT
GGTAGCCAGCGAGGTAGCTAACCCCCGAATATCGGTTCCAAAAGCCGTGA
GATCCATATGGATTCGTCTTGGGCTCTTCTACATTCTCGGCAGCCTCATG
ATTACATTAAGCGTTGATCCAACCGACCCAAACTTGTTCGGATCGTCAGG
AAGCAATGCTTCGCCTTTCGTTATTGCCTTCAAAAATGCAGGAATTCCTG
TGATGGCGCATATTACCAACGCCGTGATCTTCATTTCGATGCTCTCGACG
GGGAGTATCTCTGGCTATGGTGGCTCCCGGATGCTGATGGGGCTGGCGCA
TGTGGGTATGAATCATAGGGGCATCATAACTATCCTCAACTACTGGACCG
ATGAAGTCCCCAAGGTTGCATGGATATCCATCTTCTGGGTCGTCATCATT
CTCATCAATATTTGGGTCGTCAAGCTATTCGCCGAAGTGGAGGTAGTTGC
ATCGACGGTGAAATTCGGCTGGATGTTAGTTATCATCCCTGCCCTCATCG
ATGGTCTCCCTCGGATCAGCCATCGGAATGGGCATGTGGCTGGGAAGTGG
GACATCTCTAGTCGATGGTGGCCCTGCGAGTCTTTTCATTGGATATCTGA
TCAGCAGCTCCATGGTATGGTCAGTCAGTCAATCCATTGGTGAGATGGCT
GTCATGTACCCCCTGCCATCTGCTTTCGTACAGTGGTCTACCATCTTCGT
CAGTCCTGCTGCTGGGTTTGCCCTGGGATGGGGATACTGGTTTTCGTACT
GGATCACCATAGCCAATGAACTCCAGATATTCGGCAAAGCAGACCGCATC
GGCCGCCCATGGGCCGGCTACATCGCCACGATCGGGATAGGAGGCGCCCT
CTCGTACATCAACGTATCCAACACCGGAGCGCAGGTATTCCAATGGTTAT
CCAACCTAGTCTCGCTCCTCACGCTCTTCGGATGGGGCCTGATTTCTCTT
TCTCATCTACGATTCCGATATAGCTGGAAGGTTCAAGGTCGGGATGAGAC
CCACCTTCCATGGAGAACGATGGCATATCCCTATGCGACATGGTGGGCAC
TGATCTGGTGTATTGTATTGATCGGGTTGGAGCTTTACTTGAGCATTTGG
CCCCTAGGTAAATCGACGAGCGCGAAGAACTTCTTTGCGAGCTATATCAG
TGTGATTGCTGTCATTATCATCTGGATTGGCGCGCAGATTTGGTATCGCG
GCCCGCTCTGGGTGGATGCGAGGGAGATTGACCTTGATAGATGGCGACGC
TACTATGCGGATCGGGTTGACGAGGAGTCAATTCCGGTGAGAAAGTCGCT
GGTAAGGAGGATGAAGGCGCTTATTGAGTGATAATCACCGCGGGTGGCTC
CCCCCAAGAAGGCCCAATCGGCTTCCGCTACTGGAACGAGCAAGCATTCC
GAAACGGCTTCAAAGGCTTCCTCAGCATCCTCCCAACCTGCATCTTCGCC
ATGGCGGGGACAGAAAGCGCAGCAATGGTAGCCAGCGAGGTAGCTAACCC
CCGAATATCGGTTCCAAAAGCCGTGAGATCCATATGGATTCGTCTTGGGC
TCTTCTACATTCTCGGCAGCCTCATGATTACATTAAGCGTTGATCCAACC
GACCCAAACTTGTTCGGATCGTCAGGAAGCAATGCTTCGCCTTTCGTTAT
TGCCTTCAAAAATGCAGGAATTCCTGTGATGGCGCATATTACCAACGCCG
TGATCTTCATTTCGATGCTCTCGACGGGGAGTATCTCTGGCTATGGTGGC
TCCCGGATGCTGATGGGGCTGGCGCATGTGGGTATGAATCATAGGGGCAT
CATAACTATCCTCAACTACTGGACCGATGAAGTCCCCAAGGTTGCATGGA
TATCCATCTTCTGGGTCGTCATCATTCTCATCAATATTTGGGTCGTCAAG
CTATTCGCCGAAGTGGAGGTAGTTGCATCGACGGTGAAATTCGGCTGGAT
GTTAGTTATCATCCCTGCCCTCATCGATGGTCTCCCTCGGATCAGCCATC
GGAATGGGCATGTGGCTGGGAAGTGGGACATCTCTAGTCGATGGTGGCCC
TGCGAGTCTTTTCATTGGATATCTGATCAGCAGCTCCATGGTATGGTCAG
TCAGTCAATCCATTGGTGAGATGGCTGTCATGTACCCCCTGCCATCTGCT
TTCGTACAGTGGTCTACCATCTTCGTCAGTCCTGCTGCTGGGTTTGCCCT
GGGATGGGGATACTGGTTTTCGTACTGGATCACCATAGCCAATGAACTCC
AGATATTCGGCAAAGCAGACCGCATCGGCCGCCCATGGGCCGGCTACATC
GCCACGATCGGGATAGGAGGCGCCCTCTCGTACATCAACGTATCCAACAC
CGGAGCGCAGGTATTCCAATGGTTATCCAACCTAGTCTCGCTCCTCACGC
TCTTCGGATGGGGCCTGATTTCTCTTTCTCATCTACGATTCCGATATAGC
TGGAAGGTTCAAGGTCGGGATGAGACCCACCTTCCATGGAGAACGATGGC
ATATCCCTATGCGACATGGTGGGCACTGATCTGGTGTATTGTATTGATCG
GGTTGGAGCTTTACTTGAGCATTTGGCCCCTAGGTAAATCGACGAGCGCG
AAGAACTTCTTTGCGAGCTATATCAGTGTGATTGCTGTCATTATCATCTG
GATTGGCGCGCAGATTTGGTATCGCGGCCCGCTCTGGGTGGATGCGAGGG
AGATTGACCTTGATAGATGGCGACGCTACTATGCGGATCGGGTTGACGAG
GAGTCAATTCCGGTGAGAAAGTCGCTGGTAAGGAGGATGAAGGCGCTTAT
TGAGTGATAATCACCGCGGGTGGCTCCCCCCAAGAAGGCCCAATCGGCTT
CCGCTACTGGAACGAGCAAGCATTCCGAAACGGCTTCAAAGGCTTCCTCA
GCATCCTCCCAACCTGCATCTTCGCCATGGCGGGGACAGAAAGCGCAGCA
ATGGTAGCCAGCGAGGTAGCTAACCCCCGAATATCGGTTCCAAAAGCCGT
GAGATCCATATGGATTCGTCTTGGGCTCTTCTACATTCTCGGCAGCCTCA
TGATTACATTAAGCGTTGATCCAACCGACCCAAACTTGTTCGGATCGTCA
GGAAGCAATGCTTCGCCTTTCGTTATTGCCTTCAAAAATGCAGGAATTCC
TGTGATGGCGCATATTACCAACGCCGTGATCTTCATTTCGATGCTCTCGA
CGGGGAGTATCTCTGGCTATGGTGGCTCCCGGATGCTGATGGGGCTGGCG
CATGTGGGTATGAATCATAGGGGCATCATAACTATCCTCAACTACTGGAC
CGATGAAGTCCCCAAGGTTGCATGGATATCCATCTTCTGGGTCGTCATCA
TTCTCATCAATATTTGGGTCGTCAAGCTATTCGCCGAAGTGGAGGTAGTT
GCATCGACGGTGAAATTCGGCTGGATGTTAGTTATCATCCCTGCCCTCAT
CGATGGTCTCCCTCGGATCAGCCATCGGAATGGGCATGTGGCTGGGAAGT
GGGACATCTCTAGTCGATGGTGGCCCTGCGAGTCTTTTCATTGGATATCT
GATCAGCAGCTCCATGGTATGGTCAGTCAGTCAATCCATTGGTGAGATGG
CTGTCATGTACCCCCTGCCATCTGCTTTCGTACAGTGGTCTACCATCTTC
GTCAGTCCTGCTGCTGGGTTTGCCCTGGGATGGGGATACTGGTTTTCGTA
CTGGATCACCATAGCCAATGAACTCCAGATATTCGGCAAAGCAGACCGCA
TCGGCCGCCCATGGGCCGGCTACATCGCCACGATCGGGATAGGAGGCGCC
CTCTCGTACATCAACGTATCCAACACCGGAGCGCAGGTATTCCAATGGTT
ATCCAACCTAGTCTCGCTCCTCACGCTCTTCGGATGGGGCCTGATTTCTC
TTTCTCATCTACGATTCCGATATAGCTGGAAGGTTCAAGGTCGGGATGAG
ACCCACCTTCCATGGAGAACGATGGCATATCCCTATGCGACATGGTGGGC
ACTGATCTGGTGTATTGTATTGATCGGGTTGGAGCTTTACTTGAGCATTT
GGCCCCTAGGTAAATCGACGAGCGCGAAGAACTTCTTTGCGAGCTATATC
AGTGTGATTGCTGTCATTATCATCTGGATTGGCGCGCAGATTTGGTATCG
CGGCCCGCTCTGGGTGGATGCGAGGGAGATTGACCTTGATAGATGGCGAC
GCTACTATGCGGATCGGGTTGACGAGGAGTCAATTCCGGTGAGAAAGTCG
CTGGTAAGGAGGATGAAGGCGCTTATTGAGTGATAATCACCGCGGGTGGC
TCCCCCCAAGAAGGCCCAATCGGCTTCCGCTACTGGAACGAGCAAGCATT
CCGAAACGGCTTCAAAGGCTTCCTCAGCATCCTCCCAACCTGCATCTTCG
CCATGGCGGGGACAGAAAGCGCAGCAATGGTAGCCAGCGAGGTAGCTAAC
CCCCGAATATCGGTTCCAAAAGCCGTGAGATCCATATGGATTCGTCTTGG
GCTCTTCTACATTCTCGGCAGCCTCATGATTACATTAAGCGTTGATCCAA
CCGACCCAAACTTGTTCGGATCGTCAGGAAGCAATGCTTCGCCTTTCGTT
ATTGCCTTCAAAAATGCAGGAATTCCTGTGATGGCGCATATTACCAACGC
CGTGATCTTCATTTCGATGCTCTCGACGGGGAGTATCTCTGGCTATGGTG
GCTCCCGGATGCTGATGGGGCTGGCGCATGTGGGTATGAATCATAGGGGC
ATCATAACTATCCTCAACTACTGGACCGATGAAGTCCCCAAGGTTGCATG
GATATCCATCTTCTGGGTCGTCATCATTCTCATCAATATTTGGGTCGTCA
AGCTATTCGCCGAAGTGGAGGTAGTTGCATCGACGGTGAAATTCGGCTGG
ATGTTAGTTATCATCCCTGCCCTCATCGATGGTCTCCCTCGGATCAGCCA
TCGGAATGGGCATGTGGCTGGGAAGTGGGACATCTCTAGTCGATGGTGGC
CCTGCGAGTCTTTTCATTGGATATCTGATCAGCAGCTCCATGGTATGGTC
AGTCAGTCAATCCATTGGTGAGATGGCTGTCATGTACCCCCTGCCATCTG
CTTTCGTACAGTGGTCTACCATCTTCGTCAGTCCTGCTGCTGGGTTTGCC
CTGGGATGGGGATACTGGTTTTCGTACTGGATCACCATAGCCAATGAACT
CCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006865 | amino acid transport |
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006243-T1.utr3p1 | KJC3_006243-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004840 |
| DBxref | InterPro:IPR004841 |
| DBxref | PFAM:PF13520 |
| DBxref | PFAM:PF00324 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5128888..5130586 - |
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