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KJC3_006252-T1, KJC3_006252-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006252-T1
Unique NameKJC3_006252-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5149640..5151363-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006252-T1 ID=KJC3_006252-T1|Name=KJC3_006252-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1724bp|location=Sequence derived from alignment at ch4:5149640..5151363- (Aspergillus niger KJC3)
CTGGGCATGTGGGTGTACCTACATCAAAAGTGATCAAAGCTATATAATCC
AAATTATTCTCTCACTTATAGGATAATTCACAGGTCAAACATGCCTCCTA
AGCGGAAGCATTCCAGCAATGGACCCGAGCAAAGGAGTGAGGCGCGCAAC
AAGCCTTACGCCTACTTGAAGCCCCAGGTCCGGCAGGTCTCCGAAAGGAC
CATCAAATCCAAGTGGTCCACACTTCCGGAGCCTGTTCAAGACAGGGTGC
GCGACATGTTTCGGGCCCTGGAGCGTCCGGTTATCGTAAGACAGCAGAAC
GAGGGCAAACGTATCGAAGCACAGGCTGCTGTTCAGGCTGTTGTGAAAAA
GTATAGTTCTTTGCCTTTTGGCTCGAGGAGAATGATCATACTAATTTGTA
TTTCCCAATTGTATAGTCTAGGAAAAAGGCTTCCGCGCATGCCATTTCCT
CCAGTTACGAAAGACTCTGTCTTTGAGTACGAGGCAGCGCTCAAGGAACA
TGTAAGTAATGCTCAATTAAACCTCTTTGCCACAAGGTATAACTGACATA
TTTTGCAGTGCTCCTTGGAAGCTACTTTAGCCACAGTGACTGATAGTATT
GATCTCTTAAAGGCTGAAGTCGAAAAGGAAGAAGCTATGCTCGAAAGAGA
GAAAAAGCAACTTCAGGAGATGGAGAGGAATGCGAAGCGGGCGGAAGCGG
AGAGGAAGAGGCAATCAAAGAACGTAAGTGTGACCTTGATGCGAATAACT
CATGAATTTTACGCTGACCTTTTCTAGGAACATCCTGTTCTGCGGCAGGT
CGACAGCTTGCCTGATGAGTATAATCAGAAGCAGACCGAGTTTACCCTTG
CGGGAGGAAAAGAAACCCAGACGATGTTCGACGAGGTGCGTTTTCAGCTC
CCCTTGTACCTTCGCCTGATGTCCGTTGCTGACATACCGTGTTTAGCTTG
AAAATGACCCAGAAGTCTCGAATATCTTGAAACAACTGACTGGACATCTG
AAGTCAATGCAAAACAACACCGCACCCGTCGCTGGTTTGAAGGACGCAAT
TGGCAGGTCACATGCAGCATTAAGTCTGACTTTCATGCCCGAAGACTGAA
CTTACAGAATTCTGCATCAATGGCAAGTTCAGAACGAGTGTGCTGTTACA
GCGTGTACGACATGTGGTGCGTATATCGAAAGATGCAAGCCCATGCCAGT
CTTTAAGACAGCTTGGAAAACGAGTCCATGCGTAGGACGGTATTCGACAT
CATGCAATGGACCAAGGTACCTGCGAGCCAGTTTTGACGCTACCTGGAAT
GGCTATCGTCTCAACTGTGTGCAAAACCCCTGGCGGGACACCAGTGCTAT
ACGGGGCTAAACGAATTCCCGCGCCTTGGAGACCTAGTCCTCCTATTCAG
GACAAGCTAAGCCCTCATAGCGTCCTACCACGTTCTCGTCAGGAATTAGG
CTCTGGGAATTCTTTAGGTTCAAGTGGAGTTTAGCCAAATATTGACAGCG
GACCCCCACCAGTTGACTATAGGGAAAGATGTCCAGTGGGCTTAGAGGAA
GGTCGTGTCTGGGGATGCTAATGAGGCATCATCTACGGGTTTTTTGCCAC
CCTAAAACCACTTAATACAACACCTAATTCTGAAGAGGAAACAAATTACT
CCATTGCCTACTCTACAGAACAGCTTAATGTAGGAACATGTGGCTGCATA
TGCTAGGAGCGAGTTAACCGAGGT
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Coding sequence (CDS) from alignment at ch4:5149640..5151363-

>KJC3_006252-T1 ID=KJC3_006252-T1|Name=KJC3_006252-T1|organism=Aspergillus niger KJC3|type=CDS|length=3855bp|location=Sequence derived from alignment at ch4:5149640..5151363- (Aspergillus niger KJC3)
CTTGAAAATGACCCAGAAGTCTCGAATATCTTGAAACAACTGACTGGACA
TCTGAAGTCAATGCAAAACAACACCGCACCCGTCGCTGGTTTGAAGGACG
CAATTGGCAGGTCACATGCAGCATTAAGTCTGACTTTCATGCCCGAAGAC
TGAGAACATCCTGTTCTGCGGCAGGTCGACAGCTTGCCTGATGAGTATAA
TCAGAAGCAGACCGAGTTTACCCTTGCGGGAGGAAAAGAAACCCAGACGA
TGTTCGACGAGTGCTCCTTGGAAGCTACTTTAGCCACAGTGACTGATAGT
ATTGATCTCTTAAAGGCTGAAGTCGAAAAGGAAGAAGCTATGCTCGAAAG
AGAGAAAAAGCAACTTCAGGAGATGGAGAGGAATGCGAAGCGGGCGGAAG
CGGAGAGGAAGAGGCAATCAAAGAACTCTAGGAAAAAGGCTTCCGCGCAT
GCCATTTCCTCCAGTTACGAAAGACTCTGTCTTTGAGTACGAGGCAGCGC
TCAAGGAACATATGCCTCCTAAGCGGAAGCATTCCAGCAATGGACCCGAG
CAAAGGAGTGAGGCGCGCAACAAGCCTTACGCCTACTTGAAGCCCCAGGT
CCGGCAGGTCTCCGAAAGGACCATCAAATCCAAGTGGTCCACACTTCCGG
AGCCTGTTCAAGACAGGGTGCGCGACATGTTTCGGGCCCTGGAGCGTCCG
GTTATCGTAAGACAGCAGAACGAGGGCAAACGTATCGAAGCACAGGCTGC
TGTTCAGGCTGTTGTGAAAAACTTGAAAATGACCCAGAAGTCTCGAATAT
CTTGAAACAACTGACTGGACATCTGAAGTCAATGCAAAACAACACCGCAC
CCGTCGCTGGTTTGAAGGACGCAATTGGCAGGTCACATGCAGCATTAAGT
CTGACTTTCATGCCCGAAGACTGAGAACATCCTGTTCTGCGGCAGGTCGA
CAGCTTGCCTGATGAGTATAATCAGAAGCAGACCGAGTTTACCCTTGCGG
GAGGAAAAGAAACCCAGACGATGTTCGACGAGTGCTCCTTGGAAGCTACT
TTAGCCACAGTGACTGATAGTATTGATCTCTTAAAGGCTGAAGTCGAAAA
GGAAGAAGCTATGCTCGAAAGAGAGAAAAAGCAACTTCAGGAGATGGAGA
GGAATGCGAAGCGGGCGGAAGCGGAGAGGAAGAGGCAATCAAAGAACTCT
AGGAAAAAGGCTTCCGCGCATGCCATTTCCTCCAGTTACGAAAGACTCTG
TCTTTGAGTACGAGGCAGCGCTCAAGGAACATATGCCTCCTAAGCGGAAG
CATTCCAGCAATGGACCCGAGCAAAGGAGTGAGGCGCGCAACAAGCCTTA
CGCCTACTTGAAGCCCCAGGTCCGGCAGGTCTCCGAAAGGACCATCAAAT
CCAAGTGGTCCACACTTCCGGAGCCTGTTCAAGACAGGGTGCGCGACATG
TTTCGGGCCCTGGAGCGTCCGGTTATCGTAAGACAGCAGAACGAGGGCAA
ACGTATCGAAGCACAGGCTGCTGTTCAGGCTGTTGTGAAAAACTTGAAAA
TGACCCAGAAGTCTCGAATATCTTGAAACAACTGACTGGACATCTGAAGT
CAATGCAAAACAACACCGCACCCGTCGCTGGTTTGAAGGACGCAATTGGC
AGGTCACATGCAGCATTAAGTCTGACTTTCATGCCCGAAGACTGAGAACA
TCCTGTTCTGCGGCAGGTCGACAGCTTGCCTGATGAGTATAATCAGAAGC
AGACCGAGTTTACCCTTGCGGGAGGAAAAGAAACCCAGACGATGTTCGAC
GAGTGCTCCTTGGAAGCTACTTTAGCCACAGTGACTGATAGTATTGATCT
CTTAAAGGCTGAAGTCGAAAAGGAAGAAGCTATGCTCGAAAGAGAGAAAA
AGCAACTTCAGGAGATGGAGAGGAATGCGAAGCGGGCGGAAGCGGAGAGG
AAGAGGCAATCAAAGAACTCTAGGAAAAAGGCTTCCGCGCATGCCATTTC
CTCCAGTTACGAAAGACTCTGTCTTTGAGTACGAGGCAGCGCTCAAGGAA
CATATGCCTCCTAAGCGGAAGCATTCCAGCAATGGACCCGAGCAAAGGAG
TGAGGCGCGCAACAAGCCTTACGCCTACTTGAAGCCCCAGGTCCGGCAGG
TCTCCGAAAGGACCATCAAATCCAAGTGGTCCACACTTCCGGAGCCTGTT
CAAGACAGGGTGCGCGACATGTTTCGGGCCCTGGAGCGTCCGGTTATCGT
AAGACAGCAGAACGAGGGCAAACGTATCGAAGCACAGGCTGCTGTTCAGG
CTGTTGTGAAAAACTTGAAAATGACCCAGAAGTCTCGAATATCTTGAAAC
AACTGACTGGACATCTGAAGTCAATGCAAAACAACACCGCACCCGTCGCT
GGTTTGAAGGACGCAATTGGCAGGTCACATGCAGCATTAAGTCTGACTTT
CATGCCCGAAGACTGAGAACATCCTGTTCTGCGGCAGGTCGACAGCTTGC
CTGATGAGTATAATCAGAAGCAGACCGAGTTTACCCTTGCGGGAGGAAAA
GAAACCCAGACGATGTTCGACGAGTGCTCCTTGGAAGCTACTTTAGCCAC
AGTGACTGATAGTATTGATCTCTTAAAGGCTGAAGTCGAAAAGGAAGAAG
CTATGCTCGAAAGAGAGAAAAAGCAACTTCAGGAGATGGAGAGGAATGCG
AAGCGGGCGGAAGCGGAGAGGAAGAGGCAATCAAAGAACTCTAGGAAAAA
GGCTTCCGCGCATGCCATTTCCTCCAGTTACGAAAGACTCTGTCTTTGAG
TACGAGGCAGCGCTCAAGGAACATATGCCTCCTAAGCGGAAGCATTCCAG
CAATGGACCCGAGCAAAGGAGTGAGGCGCGCAACAAGCCTTACGCCTACT
TGAAGCCCCAGGTCCGGCAGGTCTCCGAAAGGACCATCAAATCCAAGTGG
TCCACACTTCCGGAGCCTGTTCAAGACAGGGTGCGCGACATGTTTCGGGC
CCTGGAGCGTCCGGTTATCGTAAGACAGCAGAACGAGGGCAAACGTATCG
AAGCACAGGCTGCTGTTCAGGCTGTTGTGAAAAACTTGAAAATGACCCAG
AAGTCTCGAATATCTTGAAACAACTGACTGGACATCTGAAGTCAATGCAA
AACAACACCGCACCCGTCGCTGGTTTGAAGGACGCAATTGGCAGGTCACA
TGCAGCATTAAGTCTGACTTTCATGCCCGAAGACTGAGAACATCCTGTTC
TGCGGCAGGTCGACAGCTTGCCTGATGAGTATAATCAGAAGCAGACCGAG
TTTACCCTTGCGGGAGGAAAAGAAACCCAGACGATGTTCGACGAGTGCTC
CTTGGAAGCTACTTTAGCCACAGTGACTGATAGTATTGATCTCTTAAAGG
CTGAAGTCGAAAAGGAAGAAGCTATGCTCGAAAGAGAGAAAAAGCAACTT
CAGGAGATGGAGAGGAATGCGAAGCGGGCGGAAGCGGAGAGGAAGAGGCA
ATCAAAGAACTCTAGGAAAAAGGCTTCCGCGCATGCCATTTCCTCCAGTT
ACGAAAGACTCTGTCTTTGAGTACGAGGCAGCGCTCAAGGAACATATGCC
TCCTAAGCGGAAGCATTCCAGCAATGGACCCGAGCAAAGGAGTGAGGCGC
GCAACAAGCCTTACGCCTACTTGAAGCCCCAGGTCCGGCAGGTCTCCGAA
AGGACCATCAAATCCAAGTGGTCCACACTTCCGGAGCCTGTTCAAGACAG
GGTGCGCGACATGTTTCGGGCCCTGGAGCGTCCGGTTATCGTAAGACAGC
AGAACGAGGGCAAACGTATCGAAGCACAGGCTGCTGTTCAGGCTGTTGTG
AAAAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006252KJC3_006252Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006252-T1KJC3_006252-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006252-T1.cdsKJC3_006252-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006252-T1.utr3p1KJC3_006252-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006252-T1.exon5KJC3_006252-T1.exon5Aspergillus niger KJC3exon
KJC3_006252-T1.exon4KJC3_006252-T1.exon4Aspergillus niger KJC3exon
KJC3_006252-T1.exon3KJC3_006252-T1.exon3Aspergillus niger KJC3exon
KJC3_006252-T1.exon2KJC3_006252-T1.exon2Aspergillus niger KJC3exon
KJC3_006252-T1.exon1KJC3_006252-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006252-T1.utr5p1KJC3_006252-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR025212
DBxrefPFAM:PF13094
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5149640..5151363 -
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