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KJC3_006253-T1, KJC3_006253-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006253-T1
Unique NameKJC3_006253-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5151654..5153978-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006253-T1 ID=KJC3_006253-T1|Name=KJC3_006253-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2325bp|location=Sequence derived from alignment at ch4:5151654..5153978- (Aspergillus niger KJC3)
ACTGAATGCTACGATCGATCTGTCTATCTCTGGTTACTACTCTCCCCACC
GTCCATGATCCCCGGATTCCGCCGTCAACCCTCCCGTCTATCTGTCAGTT
TCAATGTGGGGGATGCCTTTTCCGTCAAGTGAATTTGGTCTTGTTGACGG
TGTTTCGTATCCTAGACCTCCAGACATTCGCCCGTACTCTCCCGGCACCA
TCGACCGTTGATACTAGCCTTCGCAACCACCGTCCCGTATAGCTAGCTAG
CTTCCTATCTTCTGGTGATTGGTATCGCTGGAATTCTTTGAAGGCATATT
GTTATCGCATTCCTGACAGGGCATTATTCTCTTTCCCTGCATCCGCTTTG
CCGGTCAAGGCATGTTGGCACTGTCTTTCGGCGCTGCTCTCATTCAAGAC
TAGCACATGCTAGTCGAGTTTCTTTGCGACATTACATATTTGCCTTCTTT
CGCTCATCCACTATCATCGCCATGGAACTAAACCGGTCGGGACAACATAA
TGGCCAGAATAGTCCGCAGCCTGGCCCTTTTGGCTGTAAGTGATTTCTTT
AGTTGTTGCCATGTCCTGTCTAATATTGAGGGGCTCTAGATTCCTTCCTC
TCTCCTACAGATACCCCATTCGAACCTGCTCCTGCGCCACCTCCCGGGCC
GGCGCTCTTGGATCACGATGAATCATTGATGTTGGATAACTTCTTCACTA
CGATGAACTCAAATCAACTCTCCAGCGACTTTTGGCTGCCGAGTCAGTCA
AACAAGCCATTTGGCACCACTAACTTCGACTTCTCTGATGAGCTCCTCCC
CCCGACTTTCGAAGGGTCCACGACATCTCTTTCATCACAGCCATCGCTCT
CTCATCGCAGCATAGACAAGCCGCTTATGGATGTGATGCCTGGGAACCTG
GGTGCCAACTCAGATATATTCGCGGCTGCTTCCATGCTATACCATAATGG
GATGCATGGGGCCGAATTCAATACTAACTTAGGATCACATTCATATCCAT
CTCCGGACATAGATTTCAGCAGCCTCAGAATGTCCACTCATGGGAAATTT
CAACCGCATCCCAGCCATGTGCCCTTGAAACAGCCCAACAGCTCATCCCG
TCCTCGGTTGCCCCATGGGTATCATACCTCTGAGATGCTCTTCGATGTCC
GTGAACCGATATCGCCTGAACAACAGCAAACCGCCAAGGTTCGTCCACTT
CATTGGGGCTCCGATGAAAGTTTCGTGGATCAAGGTTACATTGCACCGCC
GGATCAGCCAGATGAAGAGCAGCGCACGAAAGAATTGCTCGGTCACTTGG
CATGTTTTGAGGCTCAAAGCAGTGCCGCAAACACTCGAGCGCCGAGTCCA
GTGCGTGTCACTGGAAACTATGATGCGACATGGACGGATACAGATGCGGC
TGGACAACTCAGCTCTCTGCGCAGAGAGTTCAAAGACAGCATGGAAGATC
TTTCCCAACCCAAAAAGAAACAAAGAGTTTTGGTTAAGGAAGAAGAAGAC
GACGACCATACGGACGAGGAAAGTTCGCGGCCAAGATTAAAAAAGTCCAA
GGCTTCATCGTCAAGACGAATGTCACATGACGCCGTCCGGAAGCCAAGGC
TTTCTCAAGGTCCAAAGCCCGCACGAGAGAACCTGACCGAAGAACAGAAA
AGAAGCAACCATATACTTTCGGAGCAAAAGCGAAGGAACTTGATCAGACA
AGGGTTCGATGATCTGTGCACGCTTGTTCCTGGCCTAAAAGGCGGCGGCT
TCAGCAAGAGCGCAATGCTCACGCAGGCGGCCGACTGGTTGGAAGAAGTA
TTGCGCGGCAATGATATACTCAAAGCACAGCTAGCGGAGCTGAAAGCCAT
GAATGGCTTGGTGATGCCCCGGTAGTTACCTTCAATTATGCGACCATGAT
CATAACTCTTATTCTATCGAAGGCATTGGCTGATCTCCACCCATTTGTAC
ATTGAAGCAGTTCAGCGATCTTCTGGAAGGATGCGCATTGTTCAAACGGA
AATGCAGGCGTTTGATTTCACGGCCTTGATTCCTCCATCGACCAGGGGTG
TGATGTACCGCCCACCTGGTTGCCGTCACATTAATTATCCCGGCCTATTA
CATGTCACCCCATAATACCCACTTGGATTGGCGATAATGGTTTAATTTTT
TGAATACCACATCGATCTAGTTTGATGCATGCATAATGTTGAGAGAATAA
GCTCTCCCACGAGATCTTCCCGTTCTTCATTGATGCACTGTCTCCATTGT
TTCCTAATCACTTATCCAAGTGAGGTAAGGAACCATTAGGCTTCAAAATC
GTATATCCAACCACTAGGATGCAGG
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Coding sequence (CDS) from alignment at ch4:5151654..5153978-

>KJC3_006253-T1 ID=KJC3_006253-T1|Name=KJC3_006253-T1|organism=Aspergillus niger KJC3|type=CDS|length=2700bp|location=Sequence derived from alignment at ch4:5151654..5153978- (Aspergillus niger KJC3)
ATTCCTTCCTCTCTCCTACAGATACCCCATTCGAACCTGCTCCTGCGCCA
CCTCCCGGGCCGGCGCTCTTGGATCACGATGAATCATTGATGTTGGATAA
CTTCTTCACTACGATGAACTCAAATCAACTCTCCAGCGACTTTTGGCTGC
CGAGTCAGTCAAACAAGCCATTTGGCACCACTAACTTCGACTTCTCTGAT
GAGCTCCTCCCCCCGACTTTCGAAGGGTCCACGACATCTCTTTCATCACA
GCCATCGCTCTCTCATCGCAGCATAGACAAGCCGCTTATGGATGTGATGC
CTGGGAACCTGGGTGCCAACTCAGATATATTCGCGGCTGCTTCCATGCTA
TACCATAATGGGATGCATGGGGCCGAATTCAATACTAACTTAGGATCACA
TTCATATCCATCTCCGGACATAGATTTCAGCAGCCTCAGAATGTCCACTC
ATGGGAAATTTCAACCGCATCCCAGCCATGTGCCCTTGAAACAGCCCAAC
AGCTCATCCCGTCCTCGGTTGCCCCATGGGTATCATACCTCTGAGATGCT
CTTCGATGTCCGTGAACCGATATCGCCTGAACAACAGCAAACCGCCAAGG
TTCGTCCACTTCATTGGGGCTCCGATGAAAGTTTCGTGGATCAAGGTTAC
ATTGCACCGCCGGATCAGCCAGATGAAGAGCAGCGCACGAAAGAATTGCT
CGGTCACTTGGCATGTTTTGAGGCTCAAAGCAGTGCCGCAAACACTCGAG
CGCCGAGTCCAGTGCGTGTCACTGGAAACTATGATGCGACATGGACGGAT
ACAGATGCGGCTGGACAACTCAGCTCTCTGCGCAGAGAGTTCAAAGACAG
CATGGAAGATCTTTCCCAACCCAAAAAGAAACAAAGAGTTTTGGTTAAGG
AAGAAGAAGACGACGACCATACGGACGAGGAAAGTTCGCGGCCAAGATTA
AAAAAGTCCAAGGCTTCATCGTCAAGACGAATGTCACATGACGCCGTCCG
GAAGCCAAGGCTTTCTCAAGGTCCAAAGCCCGCACGAGAGAACCTGACCG
AAGAACAGAAAAGAAGCAACCATATACTTTCGGAGCAAAAGCGAAGGAAC
TTGATCAGACAAGGGTTCGATGATCTGTGCACGCTTGTTCCTGGCCTAAA
AGGCGGCGGCTTCAGCAAGAGCGCAATGCTCACGCAGGCGGCCGACTGGT
TGGAAGAAGTATTGCGCGGCAATGATATACTCAAAGCACAGCTAGCGGAG
CTGAAAGCCATGAATGGCTTGGTGATGCCCCGGTAGATGGAACTAAACCG
GTCGGGACAACATAATGGCCAGAATAGTCCGCAGCCTGGCCCTTTTGGCT
ATTCCTTCCTCTCTCCTACAGATACCCCATTCGAACCTGCTCCTGCGCCA
CCTCCCGGGCCGGCGCTCTTGGATCACGATGAATCATTGATGTTGGATAA
CTTCTTCACTACGATGAACTCAAATCAACTCTCCAGCGACTTTTGGCTGC
CGAGTCAGTCAAACAAGCCATTTGGCACCACTAACTTCGACTTCTCTGAT
GAGCTCCTCCCCCCGACTTTCGAAGGGTCCACGACATCTCTTTCATCACA
GCCATCGCTCTCTCATCGCAGCATAGACAAGCCGCTTATGGATGTGATGC
CTGGGAACCTGGGTGCCAACTCAGATATATTCGCGGCTGCTTCCATGCTA
TACCATAATGGGATGCATGGGGCCGAATTCAATACTAACTTAGGATCACA
TTCATATCCATCTCCGGACATAGATTTCAGCAGCCTCAGAATGTCCACTC
ATGGGAAATTTCAACCGCATCCCAGCCATGTGCCCTTGAAACAGCCCAAC
AGCTCATCCCGTCCTCGGTTGCCCCATGGGTATCATACCTCTGAGATGCT
CTTCGATGTCCGTGAACCGATATCGCCTGAACAACAGCAAACCGCCAAGG
TTCGTCCACTTCATTGGGGCTCCGATGAAAGTTTCGTGGATCAAGGTTAC
ATTGCACCGCCGGATCAGCCAGATGAAGAGCAGCGCACGAAAGAATTGCT
CGGTCACTTGGCATGTTTTGAGGCTCAAAGCAGTGCCGCAAACACTCGAG
CGCCGAGTCCAGTGCGTGTCACTGGAAACTATGATGCGACATGGACGGAT
ACAGATGCGGCTGGACAACTCAGCTCTCTGCGCAGAGAGTTCAAAGACAG
CATGGAAGATCTTTCCCAACCCAAAAAGAAACAAAGAGTTTTGGTTAAGG
AAGAAGAAGACGACGACCATACGGACGAGGAAAGTTCGCGGCCAAGATTA
AAAAAGTCCAAGGCTTCATCGTCAAGACGAATGTCACATGACGCCGTCCG
GAAGCCAAGGCTTTCTCAAGGTCCAAAGCCCGCACGAGAGAACCTGACCG
AAGAACAGAAAAGAAGCAACCATATACTTTCGGAGCAAAAGCGAAGGAAC
TTGATCAGACAAGGGTTCGATGATCTGTGCACGCTTGTTCCTGGCCTAAA
AGGCGGCGGCTTCAGCAAGAGCGCAATGCTCACGCAGGCGGCCGACTGGT
TGGAAGAAGTATTGCGCGGCAATGATATACTCAAAGCACAGCTAGCGGAG
CTGAAAGCCATGAATGGCTTGGTGATGCCCCGGTAGATGGAACTAAACCG
GTCGGGACAACATAATGGCCAGAATAGTCCGCAGCCTGGCCCTTTTGGCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006253KJC3_006253Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006253-T1KJC3_006253-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006253-T1.cdsKJC3_006253-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006253-T1.utr3p1KJC3_006253-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006253-T1.exon3KJC3_006253-T1.exon3Aspergillus niger KJC3exon
KJC3_006253-T1.exon2KJC3_006253-T1.exon2Aspergillus niger KJC3exon
KJC3_006253-T1.exon1KJC3_006253-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006253-T1.utr5p2KJC3_006253-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_006253-T1.utr5p1KJC3_006253-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036638
DBxrefInterPro:IPR011598
DBxrefPFAM:PF00010
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5151654..5153978 -
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