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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5154246..5157074+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006254-T2 ID=KJC3_006254-T2|Name=KJC3_006254-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2829bp|location=Sequence derived from alignment at ch4:5154246..5157074+ (Aspergillus niger KJC3)
CACCTATCCACATCCCCATTAACATGCAGTCACTGTCTACATTTTTTGTT
TCCTCCCTGCTGACAGGAATTCTTTTCCTTGATCATCCCTCACCGAGGCC
AGCCATAGAACAGCTCCGTCTCCTCCGATCTGGACGATTCGCTACCATTG
TGTCTACTGGAGTCCATACTTTCTTGGCTCCATTACACGAGCTGGTTTCC
CCAGGTGACGGATAGCGGTTGGTTGATAAACCCCAAGTTTGGAGCGTGGC
ATAACGGGGGATCGTCGCCTTCCGCCTGGTCTGTAACCCCTGAACCACAC
CTGAGTTAACGGCCATTCCCCTCGTGTCTTGAACGACCGAGGTCGAATTT
CTAATAGTCCGTCGCACGGATCCGCGGCCGATCCTACATACAAAAAGGGC
TGCCCATCACGGAGCACGTACCACTCTGGGTAACCGCCGCGAAGCCAAGT
GTTTGTGTTAGTTTCCTCTTTTGTCAAAGATCTTTGGCCCGGCCAGAAAT
GCCTGGATTTTAGTGCAGTATGTCCTGCCACAATTCCTTTGATTTTCTGC
AGGTTTCTTTTATCTCGTTTTGTGGTCATGGTCTCGATCCTGTTATCGGT
GGTATACTCCCAAGAAACAGTCTGACGCCAGCAAATAGGTTGTTTCACAA
CATAAATCGCGACTCCAATGGGACGGTCATGGACTAAATGAGTTGGATGC
ACCATGGACTCTGTCACCATTATTCGCCAGCATCAGAGCAGTATCCGTGT
TCTACAGCCGTAAGTATCGACTGTTCCCATTTCCGGCCACTTCTGGGTGA
CGTCGAGCGCATCGATTACGGTTCACTAGGCTGCATTGATACTGACCGTT
GCAGAATTCTACGCGCATACGCACTTGGTTATTTATCTTCAACTGTCCCT
AGAGTAATAACCTGTCTACGGCGAATTCGGGGGCATGGCTTAAGCTTCGG
AGAGCAGCTCAAAGAGGTATGTTAATGTACCCCCATTTGCACTGAGACTG
CTGCATCTGTGCATCGTTTGTGATCCGTATACACACATGGAAACTTTCGC
TGCCCTATCCTTTACATCCAGGATAAAGCCGGTGTACTCACTCTGGCTAT
GCAGTTGTCCGCCACATTGACAAGTACTCTACGGCTGGATGCTTTCCCAG
CGTTCTGTGCCATTCTCGTAGGGGGCTCAACCGTCTTTCCTCTCATCCTC
TTCCGATGTCTTGCGCATCTTATTCGTAGGCTGGGTTTAAAACCCGGTCG
TTTAAATGCATTGATTCACATGCGACTGGCTAGATTTGTTTCTGCGTTAC
TATCCGCTTGGTTCAGCTTTAATATATTGAATCAGAGGCCTATCAGATTG
CAGAGAAATTGCGATGATTGTCAAGGTGGTACTGATTCGAAAAATGCTGC
AGAGCAGAGAAAGCTCAGACCGGAGCCGCATAGCCGTCCCCAGTTGGCAG
GTAGAACCATGGACCTTACCCTTTTCAGCCTTACAAGAGCAGTCGATTTG
GTGGTCTACATGGGTTGGGCAAATTGGCGGCGATGGCGAAAGTCCAGGGG
TCAGTGGACTCTAGTGGAGCGTGTTGCTCCCCAACTCACAGATGCGGGTG
TGTTTGCCACGAGCGCAGCGATAGTGATGTGGGCATGGTTTTATATGCCT
GAGAGACTACCAAGATCTTACGGTAAATGGATAGGAGAAGTAGCAAAGGT
GGATGGCCGCCTGATCGAAGCACTTCGCCGTGCTAGGCAAGGTGTCTTTG
TGTACGGGAAAGACACCGGGCAAGCACCACTACTTCAGTCCATGTGCAAA
GATTATAATTGGCCCGTGGAATGGGGAGACCCTTCCAAGACCATCCCGAT
ACCGTGTGAGATGGTCCACATGGGTAGTGGTCATAGCTGTGAAAAGCATG
CTCTGTCTCGATTCACTCGAACGTTCAAGTTCGCCTGTGCTACCTACATC
CCTCTACAGATCATCTTTCGTTTGCGGTCAGTAAAGTCCCTGTCATCACT
CAACCAGCTCATAACTGCCGCCTTGCGCTCGTCTGCCTTCCTTGCTTCAT
TTGTGAGCTTATTCTACTACTCCGTCTGTCTTGCGAGAACAAGGCTTGGC
CCCAAAATATTTCACCGTGGTATAGTAACTCCAATGATGTGGGACTCTGG
GCTTTGCGTCGGCGCCGGATGCCTGATGTGCGGTTGGAGCATACTCGTGG
AGAGCGCACGGAAGCGACAGGAGATTTCATTATTTGTGGCTCCCAGGGCT
GCCGCAACTGTTCTGCCAAGATACTACGAGAAACAGGTGAGTTAAGATAA
TTTGATATCACCCAGTAGTTGCGAGGCTTGGGGATTGTCACACTCGTCCT
GCCGCTCTCTGCGCCATCCCATTCTAGCTTCGTCGAACATTGTACCACTC
TCTAACCGTTGTGGCTTATCTAGTATCAACACCGGGAACGTATAGCATTT
TCAATCAGCGCCGCCATTCTTCTGACATGTCTTCAGGAAAGGCCTGATAT
GGTTCGGGGCGTATTTGGTCGGATCGGCAGAAGCGTGCTGGCGTGATTGT
GCATAAGCGAATGGCGTTTGCGACTGGACCTTGACTCATAGACTTATCGT
CTTTCTTTCGTCACTCTCATTGTATTTATACAGTGTATCATTAGCACGTC
TGGTCTGTATTATTATGCCATTATTATCTGTCGAGAACCGAATGGACAAA
AGCGAGATATCTAGGCTTGTGGGTTTCTCTCCCTCAGGACGGAGCCACTG
GACAAACAATCGACATCTTGGTCAAGCTGATTTCCCGCCTAGATAAGATA
ATCTGATCTCGTGTTCTTTTTCTGGTCCA back to topCoding sequence (CDS) from alignment at ch4:5154246..5157074+ >KJC3_006254-T2 ID=KJC3_006254-T2|Name=KJC3_006254-T2|organism=Aspergillus niger KJC3|type=CDS|length=2622bp|location=Sequence derived from alignment at ch4:5154246..5157074+ (Aspergillus niger KJC3)
ATGCAGTTGTCCGCCACATTGACAAGTACTCTACGGCTGGATGCTTTCCC
AGCGTTCTGTGCCATTCTCGTAGGGGGCTCAACCGTCTTTCCTCTCATCC
TCTTCCGATGTCTTGCGCATCTTATTCGTAGGCTGGGTTTAAAACCCGGT
CGTTTAAATGCATTGATTCACATGCGACTGGCTAGATTTGTTTCTGCGTT
ACTATCCGCTTGGTTCAGCTTTAATATATTGAATCAGAGGCCTATCAGAT
TGCAGAGAAATTGCGATGATTGTCAAGGTGGTACTGATTCGAAAAATGCT
GCAGAGCAGAGAAAGCTCAGACCGGAGCCGCATAGCCGTCCCCAGTTGGC
AGGTAGAACCATGGACCTTACCCTTTTCAGCCTTACAAGAGCAGTCGATT
TGGTGGTCTACATGGGTTGGGCAAATTGGCGGCGATGGCGAAAGTCCAGG
GGTCAGTGGACTCTAGTGGAGCGTGTTGCTCCCCAACTCACAGATGCGGG
TGTGTTTGCCACGAGCGCAGCGATAGTGATGTGGGCATGGTTTTATATGC
CTGAGAGACTACCAAGATCTTACGGTAAATGGATAGGAGAAGTAGCAAAG
GTGGATGGCCGCCTGATCGAAGCACTTCGCCGTGCTAGGCAAGGTGTCTT
TGTGTACGGGAAAGACACCGGGCAAGCACCACTACTTCAGTCCATGTGCA
AAGATTATAATTGGCCCGTGGAATGGGGAGACCCTTCCAAGACCATCCCG
ATACCGTGTGAGATGGTCCACATGGGTAGTGGTCATAGCTGTGAAAAGCA
TGCTCTGTCTCGATTCACTCGAACGTTCAAGTTCGCCTGTGCTACCTACA
TCCCTCTACAGATCATCTTTCGTTTGCGGTCAGTAAAGTCCCTGTCATCA
CTCAACCAGCTCATAACTGCCGCCTTGCGCTCGTCTGCCTTCCTTGCTTC
ATTTGTGAGCTTATTCTACTACTCCGTCTGTCTTGCGAGAACAAGGCTTG
GCCCCAAAATATTTCACCGTGGTATAGTAACTCCAATGATGTGGGACTCT
GGGCTTTGCGTCGGCGCCGGATGCCTGATGTGCGGTTGGAGCATACTCGT
GGAGAGCGCACGGAAGCGACAGGAGATTTCATTATTTGTGGCTCCCAGGG
CTGCCGCAACTGTTCTGCCAAGATACTACGAGAAACAGTATCAACACCGG
GAACGTATAGCATTTTCAATCAGCGCCGCCATTCTTCTGACATGTCTTCA
GGAAAGGCCTGATATGGTTCGGGGCGTATTTGGTCGGATCGGCAGAAGCG
TGCTGGCGTGAATGCAGTTGTCCGCCACATTGACAAGTACTCTACGGCTG
GATGCTTTCCCAGCGTTCTGTGCCATTCTCGTAGGGGGCTCAACCGTCTT
TCCTCTCATCCTCTTCCGATGTCTTGCGCATCTTATTCGTAGGCTGGGTT
TAAAACCCGGTCGTTTAAATGCATTGATTCACATGCGACTGGCTAGATTT
GTTTCTGCGTTACTATCCGCTTGGTTCAGCTTTAATATATTGAATCAGAG
GCCTATCAGATTGCAGAGAAATTGCGATGATTGTCAAGGTGGTACTGATT
CGAAAAATGCTGCAGAGCAGAGAAAGCTCAGACCGGAGCCGCATAGCCGT
CCCCAGTTGGCAGGTAGAACCATGGACCTTACCCTTTTCAGCCTTACAAG
AGCAGTCGATTTGGTGGTCTACATGGGTTGGGCAAATTGGCGGCGATGGC
GAAAGTCCAGGGGTCAGTGGACTCTAGTGGAGCGTGTTGCTCCCCAACTC
ACAGATGCGGGTGTGTTTGCCACGAGCGCAGCGATAGTGATGTGGGCATG
GTTTTATATGCCTGAGAGACTACCAAGATCTTACGGTAAATGGATAGGAG
AAGTAGCAAAGGTGGATGGCCGCCTGATCGAAGCACTTCGCCGTGCTAGG
CAAGGTGTCTTTGTGTACGGGAAAGACACCGGGCAAGCACCACTACTTCA
GTCCATGTGCAAAGATTATAATTGGCCCGTGGAATGGGGAGACCCTTCCA
AGACCATCCCGATACCGTGTGAGATGGTCCACATGGGTAGTGGTCATAGC
TGTGAAAAGCATGCTCTGTCTCGATTCACTCGAACGTTCAAGTTCGCCTG
TGCTACCTACATCCCTCTACAGATCATCTTTCGTTTGCGGTCAGTAAAGT
CCCTGTCATCACTCAACCAGCTCATAACTGCCGCCTTGCGCTCGTCTGCC
TTCCTTGCTTCATTTGTGAGCTTATTCTACTACTCCGTCTGTCTTGCGAG
AACAAGGCTTGGCCCCAAAATATTTCACCGTGGTATAGTAACTCCAATGA
TGTGGGACTCTGGGCTTTGCGTCGGCGCCGGATGCCTGATGTGCGGTTGG
AGCATACTCGTGGAGAGCGCACGGAAGCGACAGGAGATTTCATTATTTGT
GGCTCCCAGGGCTGCCGCAACTGTTCTGCCAAGATACTACGAGAAACAGT
ATCAACACCGGGAACGTATAGCATTTTCAATCAGCGCCGCCATTCTTCTG
ACATGTCTTCAGGAAAGGCCTGATATGGTTCGGGGCGTATTTGGTCGGAT
CGGCAGAAGCGTGCTGGCGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006254-T2.utr5p1 | KJC3_006254-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006254-T2.utr3p1 | KJC3_006254-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5154246..5157074 + |
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