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KJC3_006255-T1, KJC3_006255-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006255-T1
Unique NameKJC3_006255-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5157884..5159267+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006255-T1 ID=KJC3_006255-T1|Name=KJC3_006255-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1384bp|location=Sequence derived from alignment at ch4:5157884..5159267+ (Aspergillus niger KJC3)
AGCATATAATCATTGACAATGTTCTCGCGCCCGATCTCCTCATGGGGTCG
GCTTCCTTGGTCGGGTCCCGGCCTCCGCCCGTCCACCATGACAAATACAC
GATGTGTTGACTCTGGGAGGAGATTCTTCACTCGCAGTTCATGCCTCCGG
CAGAATATCAACGCACCGTTCAATACGCCGCAGTCGCAAAAGCGCAATGC
GTCGACGATGTATGTTAAAGGAGCGCAATGGTGTCTGCAGTTCACGTCTA
ATAGGTTCTAGGTACTATGCGGCCAGTCTTATTCTCGGAACCGTTGCGCT
TGCCTATGGCTCCGTCCCTCTGTACAAAATGGTTCGACAAGCCTGCCCTT
GAATTCTAGTCTGCGGCAGAGGCTAACGGCTCTATTCTTACAGATCTGCC
AACAAACCGGTTGGAACGGTCAACCTGTACTCACTCACCGTGGAGGCGAC
AATGATACCTCTTCCCGCGTCACTCCGGTCACCGACTCCCGTCGTTTGAG
AATCACATTCAATGGATCAGTTTCGGATGTTCTGCCGTGGAAGTTCACAC
CGCAACAACGTGAAGTTCGAGTTCTTCCAGGCGAGACAGCGCTTGCGTTC
TTTACGGCGACGAACAAGGGCCCGACGGATATCATTGGTGTAGCGACGTA
CAGTGTCACTCCCGGACAAGTTGCTCCTTACTTCAGCAAGATCCAATGCT
TTTGCTTCGACGAGCAGAAGCTGAATGCTGGAGAATCGGTTGACATGCCG
GTGTTCTTCTTCATCGACCCCGACTTTGTCAAAGATCCGGCCATGAAGGG
CATTGATACGATTACGCTCTCATATACCTTCTTCAGTAAGACTCCAGAAT
GAACCCATGATGGGGTATGTTTGTGGCTAATGAAAGCGAAACAGAGGCGC
GATATGATGACAACGGTGTCTTGAAGCCATTGCCGTCGAGCTAATGGCAT
ACCTGATCGTTATACACTGCATACCAGGAGTCAAGCGATTAGACGCTCTA
TGACAACAGACTCCCAGTAAGATGCTTTTTGAAACGTATATACCCGGAAT
CACCCTGGCCAGGTGACATCCAGCGGAATGTCCCAGAGACCTGACACGGT
CCGATGTGTGACCATCCGAGCAAACTCGGAAGACATATCTCTCCTCTTAC
AAGGGCCAATCATGAAAACCTGAACCTGGTGGTCCCAAGCACCCCCCCCC
CCCCCCCCCGACCATCTTTGTAACATAGATAGAGCATGTACATACAGAGA
CCTACTGAAGCTTTTTGTATGGAACGGGTGGGGTAACAAAATCTTGTATA
ATAATCGGGCGTTGGAATATGAAATTTGAATAGGCCTAAGGGATTACCGC
CATACATTATTTACTTCAACATGGAGAAAAATTC
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Coding sequence (CDS) from alignment at ch4:5157884..5159267+

>KJC3_006255-T1 ID=KJC3_006255-T1|Name=KJC3_006255-T1|organism=Aspergillus niger KJC3|type=CDS|length=3012bp|location=Sequence derived from alignment at ch4:5157884..5159267+ (Aspergillus niger KJC3)
ATGTTCTCGCGCCCGATCTCCTCATGGGGTCGGCTTCCTTGGTCGGGTCC
CGGCCTCCGCCCGTCCACCATGACAAATACACGATGTGTTGACTCTGGGA
GGAGATTCTTCACTCGCAGTTCATGCCTCCGGCAGAATATCAACGCACCG
TTCAATACGCCGCAGTCGCAAAAGCGCAATGCGTCGACGATGTACTATGC
GGCCAGTCTTATTCTCGGAACCGTTGCGCTTGCCTATGGCTCCGTCCCTC
TGTACAAAATGATCTGCCAACAAACCGGTTGGAACGGTCAACCTGTACTC
ACTCACCGTGGAGGCGACAATGATACCTCTTCCCGCGTCACTCCGGTCAC
CGACTCCCGTCGTTTGAGAATCACATTCAATGGATCAGTTTCGGATGTTC
TGCCGTGGAAGTTCACACCGCAACAACGTGAAGTTCGAGTTCTTCCAGGC
GAGACAGCGCTTGCGTTCTTTACGGCGACGAACAAGGGCCCGACGGATAT
CATTGGTGTAGCGACGTACAGTGTCACTCCCGGACAAGTTGCTCCTTACT
TCAGCAAGATCCAATGCTTTTGCTTCGACGAGCAGAAGCTGAATGCTGGA
GAATCGGTTGACATGCCGGTGTTCTTCTTCATCGACCCCGACTTTGTCAA
AGATCCGGCCATGAAGGGCATTGATACGATTACGCTCTCATATACCTTCT
TCAAGGCGCGATATGATGACAACGGTGTCTTGAAGCCATTGCCGTCGAGC
TAAATGTTCTCGCGCCCGATCTCCTCATGGGGTCGGCTTCCTTGGTCGGG
TCCCGGCCTCCGCCCGTCCACCATGACAAATACACGATGTGTTGACTCTG
GGAGGAGATTCTTCACTCGCAGTTCATGCCTCCGGCAGAATATCAACGCA
CCGTTCAATACGCCGCAGTCGCAAAAGCGCAATGCGTCGACGATGTACTA
TGCGGCCAGTCTTATTCTCGGAACCGTTGCGCTTGCCTATGGCTCCGTCC
CTCTGTACAAAATGATCTGCCAACAAACCGGTTGGAACGGTCAACCTGTA
CTCACTCACCGTGGAGGCGACAATGATACCTCTTCCCGCGTCACTCCGGT
CACCGACTCCCGTCGTTTGAGAATCACATTCAATGGATCAGTTTCGGATG
TTCTGCCGTGGAAGTTCACACCGCAACAACGTGAAGTTCGAGTTCTTCCA
GGCGAGACAGCGCTTGCGTTCTTTACGGCGACGAACAAGGGCCCGACGGA
TATCATTGGTGTAGCGACGTACAGTGTCACTCCCGGACAAGTTGCTCCTT
ACTTCAGCAAGATCCAATGCTTTTGCTTCGACGAGCAGAAGCTGAATGCT
GGAGAATCGGTTGACATGCCGGTGTTCTTCTTCATCGACCCCGACTTTGT
CAAAGATCCGGCCATGAAGGGCATTGATACGATTACGCTCTCATATACCT
TCTTCAAGGCGCGATATGATGACAACGGTGTCTTGAAGCCATTGCCGTCG
AGCTAAATGTTCTCGCGCCCGATCTCCTCATGGGGTCGGCTTCCTTGGTC
GGGTCCCGGCCTCCGCCCGTCCACCATGACAAATACACGATGTGTTGACT
CTGGGAGGAGATTCTTCACTCGCAGTTCATGCCTCCGGCAGAATATCAAC
GCACCGTTCAATACGCCGCAGTCGCAAAAGCGCAATGCGTCGACGATGTA
CTATGCGGCCAGTCTTATTCTCGGAACCGTTGCGCTTGCCTATGGCTCCG
TCCCTCTGTACAAAATGATCTGCCAACAAACCGGTTGGAACGGTCAACCT
GTACTCACTCACCGTGGAGGCGACAATGATACCTCTTCCCGCGTCACTCC
GGTCACCGACTCCCGTCGTTTGAGAATCACATTCAATGGATCAGTTTCGG
ATGTTCTGCCGTGGAAGTTCACACCGCAACAACGTGAAGTTCGAGTTCTT
CCAGGCGAGACAGCGCTTGCGTTCTTTACGGCGACGAACAAGGGCCCGAC
GGATATCATTGGTGTAGCGACGTACAGTGTCACTCCCGGACAAGTTGCTC
CTTACTTCAGCAAGATCCAATGCTTTTGCTTCGACGAGCAGAAGCTGAAT
GCTGGAGAATCGGTTGACATGCCGGTGTTCTTCTTCATCGACCCCGACTT
TGTCAAAGATCCGGCCATGAAGGGCATTGATACGATTACGCTCTCATATA
CCTTCTTCAAGGCGCGATATGATGACAACGGTGTCTTGAAGCCATTGCCG
TCGAGCTAAATGTTCTCGCGCCCGATCTCCTCATGGGGTCGGCTTCCTTG
GTCGGGTCCCGGCCTCCGCCCGTCCACCATGACAAATACACGATGTGTTG
ACTCTGGGAGGAGATTCTTCACTCGCAGTTCATGCCTCCGGCAGAATATC
AACGCACCGTTCAATACGCCGCAGTCGCAAAAGCGCAATGCGTCGACGAT
GTACTATGCGGCCAGTCTTATTCTCGGAACCGTTGCGCTTGCCTATGGCT
CCGTCCCTCTGTACAAAATGATCTGCCAACAAACCGGTTGGAACGGTCAA
CCTGTACTCACTCACCGTGGAGGCGACAATGATACCTCTTCCCGCGTCAC
TCCGGTCACCGACTCCCGTCGTTTGAGAATCACATTCAATGGATCAGTTT
CGGATGTTCTGCCGTGGAAGTTCACACCGCAACAACGTGAAGTTCGAGTT
CTTCCAGGCGAGACAGCGCTTGCGTTCTTTACGGCGACGAACAAGGGCCC
GACGGATATCATTGGTGTAGCGACGTACAGTGTCACTCCCGGACAAGTTG
CTCCTTACTTCAGCAAGATCCAATGCTTTTGCTTCGACGAGCAGAAGCTG
AATGCTGGAGAATCGGTTGACATGCCGGTGTTCTTCTTCATCGACCCCGA
CTTTGTCAAAGATCCGGCCATGAAGGGCATTGATACGATTACGCTCTCAT
ATACCTTCTTCAAGGCGCGATATGATGACAACGGTGTCTTGAAGCCATTG
CCGTCGAGCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005507copper ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006255KJC3_006255Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006255-T1KJC3_006255-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006255-T1.utr5p1KJC3_006255-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006255-T1.exon1KJC3_006255-T1.exon1Aspergillus niger KJC3exon
KJC3_006255-T1.exon2KJC3_006255-T1.exon2Aspergillus niger KJC3exon
KJC3_006255-T1.exon3KJC3_006255-T1.exon3Aspergillus niger KJC3exon
KJC3_006255-T1.exon4KJC3_006255-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006255-T1.cdsKJC3_006255-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006255-T1.utr3p1KJC3_006255-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR023471
DBxrefInterPro:IPR007533
DBxrefPFAM:PF04442
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5157884..5159267 +
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