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KJC3_006256-T1, KJC3_006256-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006256-T1
Unique NameKJC3_006256-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5159440..5161027+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006256-T1 ID=KJC3_006256-T1|Name=KJC3_006256-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1588bp|location=Sequence derived from alignment at ch4:5159440..5161027+ (Aspergillus niger KJC3)
GGGAAAGCATACTTCTGAATAGAGACCTAGAAGCTTCAAACCAGAGCACT
ACACACTCAATCGGCAAAATGGCCTTGCTAGTCGACAAACTGCGACCGCG
GTCGCTAGATGCCCTCACATACCACCCTGAGCTGTCCGCGCGACTGAAAT
CATTGGTAAGACAATTCAAGCCAATACTATGTACCTCGAGTACAATTCTC
ACAAACATGTTTGTTTTAGGCGCAAAGCGGCGACTTCCCTCATCTGCTCA
TGTATGGTCCTTCAGGTGCAGGCAAAAAGACACGAACAATCGCGACGCTT
AAAGAATTGTACGGTTCCGGAGTCGAAAAGATCAAGATCGACGCCAGAGT
CTTCCAAACGACAAGCAACCGCAAGCTCGAGTTCAACATAGTGTCTTCGG
TCTACCACTTGGAGATCACCCCATCGGATGTTGGGAACTACGATCGTGTT
GTGGTTCAAGAGCTGCTGAAGGAGATTGCACAAACCCAGCAGGTTGATCT
CTCGGCGAAACAGCGCTTCAAAGTCGTTGTGATTAACGAGGCCGATCATC
TCACCCGTGATGCACAGGCAGCGCTGAGACGGACGATGGAAAAATATAGT
CCCAACTTGAGGTTGATTTTGTTGGCGAATAGCACTTCGAATATCATCGC
CCCTATCCGGTCCCGTACCCTGCTGGTCAGGGTTGCTGCTCCGAGTGAGG
AGGATATCTGCACTGTTTTGAAGAACGCGGCTAAGAAGGAGGGATGGCCT
GAGGCGAGTGGGTTGAATAAGAGGATAGCTAAGGAGAGTGGGCGTAACCT
TCGTCGCGCGCTTCTAATGTTCGAGGCTATTTATGCTCAGAAGTACGTTC
TAGATTGGTTGTCCATTGCGTGCCAGGGCTAACGTGATTTGCTATGGTCT
TTAGTGAGAAAGTTACGGACAACACGCTCATCCCACCACCCGACTGGGAA
GCGCTGATTGCGTTGATAGCTGAGGAGATCCTGGCAGAGCGGTCACCGGC
TCGTCTGTTGCAAGTCCGCGCACGGTTATACGATCTTTTGACGCATTGCA
TACCACCGACTACCATTATCAAGGTTCGACCAGTTTGGTTCAGGCTTGTA
GAACAGAAATGCTAATTGGACTTTAGTGTCTGACATTCAACCTCATTACA
AAGGTCGACGATGCTCTAAAGCCCGATGTCATCAGGTGGTCGGCATTCTA
TGAGCACAGGATCACTCAAGGCAGCGTAAGAGCTTTACTTGCTACATGAA
CACCCATGATACGTGACTAATACTTTTCGCAGAAAGTAATCTTTCACCTT
GAGGCATTCGTTGCCAAGTTCATGCGCATATACGAAAGGTTCGACTGCCC
CCTAATACTTCAAGACTACTTGATTGATTTACTAACCTGTGCACAGTTAT
CTGATGGGCATGGAATTCTAAAATTACGAAAATAATAATACCCAACGATT
CTTAATGACTTCACTGTACACTACCGGAGATCTTATCTTATCCGGGCCAC
TATGCGACTCGTAACTGAACTACCTCCGTATTCCTAGCATGCATTACTCC
TGTATCTTTTAAAAAACCATAGCCTTTTTACATCCTGC
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Coding sequence (CDS) from alignment at ch4:5159440..5161027+

>KJC3_006256-T1 ID=KJC3_006256-T1|Name=KJC3_006256-T1|organism=Aspergillus niger KJC3|type=CDS|length=6354bp|location=Sequence derived from alignment at ch4:5159440..5161027+ (Aspergillus niger KJC3)
ATGGCCTTGCTAGTCGACAAACTGCGACCGCGGTCGCTAGATGCCCTCAC
ATACCACCCTGAGCTGTCCGCGCGACTGAAATCATTGGCGCAAAGCGGCG
ACTTCCCTCATCTGCTCATGTATGGTCCTTCAGGTGCAGGCAAAAAGACA
CGAACAATCGCGACGCTTAAAGAATTGTACGGTTCCGGAGTCGAAAAGAT
CAAGATCGACGCCAGAGTCTTCCAAACGACAAGCAACCGCAAGCTCGAGT
TCAACATAGTGTCTTCGGTCTACCACTTGGAGATCACCCCATCGGATGTT
GGGAACTACGATCGTGTTGTGGTTCAAGAGCTGCTGAAGGAGATTGCACA
AACCCAGCAGGTTGATCTCTCGGCGAAACAGCGCTTCAAAGTCGTTGTGA
TTAACGAGGCCGATCATCTCACCCGTGATGCACAGGCAGCGCTGAGACGG
ACGATGGAAAAATATAGTCCCAACTTGAGGTTGATTTTGTTGGCGAATAG
CACTTCGAATATCATCGCCCCTATCCGGTCCCGTACCCTGCTGGTCAGGG
TTGCTGCTCCGAGTGAGGAGGATATCTGCACTGTTTTGAAGAACGCGGCT
AAGAAGGAGGGATGGCCTGAGGCGAGTGGGTTGAATAAGAGGATAGCTAA
GGAGAGTGGGCGTAACCTTCGTCGCGCGCTTCTAATGTTCGAGGCTATTT
ATGCTCAGAATGAGAAAGTTACGGACAACACGCTCATCCCACCACCCGAC
TGGGAAGCGCTGATTGCGTTGATAGCTGAGGAGATCCTGGCAGAGCGGTC
ACCGGCTCGTCTGTTGCAAGTCCGCGCACGGTTATACGATCTTTTGACGC
ATTGCATACCACCGACTACCATTATCAAGTGTCTGACATTCAACCTCATT
ACAAAGGTCGACGATGCTCTAAAGCCCGATGTCATCAGGTGGTCGGCATT
CTATGAGCACAGGATCACTCAAGGCAGCAAAGTAATCTTTCACCTTGAGG
CATTCGTTGCCAAGTTCATGCGCATATACGAAAGTTATCTGATGGGCATG
GAATTCTAAATGGCCTTGCTAGTCGACAAACTGCGACCGCGGTCGCTAGA
TGCCCTCACATACCACCCTGAGCTGTCCGCGCGACTGAAATCATTGGCGC
AAAGCGGCGACTTCCCTCATCTGCTCATGTATGGTCCTTCAGGTGCAGGC
AAAAAGACACGAACAATCGCGACGCTTAAAGAATTGTACGGTTCCGGAGT
CGAAAAGATCAAGATCGACGCCAGAGTCTTCCAAACGACAAGCAACCGCA
AGCTCGAGTTCAACATAGTGTCTTCGGTCTACCACTTGGAGATCACCCCA
TCGGATGTTGGGAACTACGATCGTGTTGTGGTTCAAGAGCTGCTGAAGGA
GATTGCACAAACCCAGCAGGTTGATCTCTCGGCGAAACAGCGCTTCAAAG
TCGTTGTGATTAACGAGGCCGATCATCTCACCCGTGATGCACAGGCAGCG
CTGAGACGGACGATGGAAAAATATAGTCCCAACTTGAGGTTGATTTTGTT
GGCGAATAGCACTTCGAATATCATCGCCCCTATCCGGTCCCGTACCCTGC
TGGTCAGGGTTGCTGCTCCGAGTGAGGAGGATATCTGCACTGTTTTGAAG
AACGCGGCTAAGAAGGAGGGATGGCCTGAGGCGAGTGGGTTGAATAAGAG
GATAGCTAAGGAGAGTGGGCGTAACCTTCGTCGCGCGCTTCTAATGTTCG
AGGCTATTTATGCTCAGAATGAGAAAGTTACGGACAACACGCTCATCCCA
CCACCCGACTGGGAAGCGCTGATTGCGTTGATAGCTGAGGAGATCCTGGC
AGAGCGGTCACCGGCTCGTCTGTTGCAAGTCCGCGCACGGTTATACGATC
TTTTGACGCATTGCATACCACCGACTACCATTATCAAGTGTCTGACATTC
AACCTCATTACAAAGGTCGACGATGCTCTAAAGCCCGATGTCATCAGGTG
GTCGGCATTCTATGAGCACAGGATCACTCAAGGCAGCAAAGTAATCTTTC
ACCTTGAGGCATTCGTTGCCAAGTTCATGCGCATATACGAAAGTTATCTG
ATGGGCATGGAATTCTAAATGGCCTTGCTAGTCGACAAACTGCGACCGCG
GTCGCTAGATGCCCTCACATACCACCCTGAGCTGTCCGCGCGACTGAAAT
CATTGGCGCAAAGCGGCGACTTCCCTCATCTGCTCATGTATGGTCCTTCA
GGTGCAGGCAAAAAGACACGAACAATCGCGACGCTTAAAGAATTGTACGG
TTCCGGAGTCGAAAAGATCAAGATCGACGCCAGAGTCTTCCAAACGACAA
GCAACCGCAAGCTCGAGTTCAACATAGTGTCTTCGGTCTACCACTTGGAG
ATCACCCCATCGGATGTTGGGAACTACGATCGTGTTGTGGTTCAAGAGCT
GCTGAAGGAGATTGCACAAACCCAGCAGGTTGATCTCTCGGCGAAACAGC
GCTTCAAAGTCGTTGTGATTAACGAGGCCGATCATCTCACCCGTGATGCA
CAGGCAGCGCTGAGACGGACGATGGAAAAATATAGTCCCAACTTGAGGTT
GATTTTGTTGGCGAATAGCACTTCGAATATCATCGCCCCTATCCGGTCCC
GTACCCTGCTGGTCAGGGTTGCTGCTCCGAGTGAGGAGGATATCTGCACT
GTTTTGAAGAACGCGGCTAAGAAGGAGGGATGGCCTGAGGCGAGTGGGTT
GAATAAGAGGATAGCTAAGGAGAGTGGGCGTAACCTTCGTCGCGCGCTTC
TAATGTTCGAGGCTATTTATGCTCAGAATGAGAAAGTTACGGACAACACG
CTCATCCCACCACCCGACTGGGAAGCGCTGATTGCGTTGATAGCTGAGGA
GATCCTGGCAGAGCGGTCACCGGCTCGTCTGTTGCAAGTCCGCGCACGGT
TATACGATCTTTTGACGCATTGCATACCACCGACTACCATTATCAAGTGT
CTGACATTCAACCTCATTACAAAGGTCGACGATGCTCTAAAGCCCGATGT
CATCAGGTGGTCGGCATTCTATGAGCACAGGATCACTCAAGGCAGCAAAG
TAATCTTTCACCTTGAGGCATTCGTTGCCAAGTTCATGCGCATATACGAA
AGTTATCTGATGGGCATGGAATTCTAAATGGCCTTGCTAGTCGACAAACT
GCGACCGCGGTCGCTAGATGCCCTCACATACCACCCTGAGCTGTCCGCGC
GACTGAAATCATTGGCGCAAAGCGGCGACTTCCCTCATCTGCTCATGTAT
GGTCCTTCAGGTGCAGGCAAAAAGACACGAACAATCGCGACGCTTAAAGA
ATTGTACGGTTCCGGAGTCGAAAAGATCAAGATCGACGCCAGAGTCTTCC
AAACGACAAGCAACCGCAAGCTCGAGTTCAACATAGTGTCTTCGGTCTAC
CACTTGGAGATCACCCCATCGGATGTTGGGAACTACGATCGTGTTGTGGT
TCAAGAGCTGCTGAAGGAGATTGCACAAACCCAGCAGGTTGATCTCTCGG
CGAAACAGCGCTTCAAAGTCGTTGTGATTAACGAGGCCGATCATCTCACC
CGTGATGCACAGGCAGCGCTGAGACGGACGATGGAAAAATATAGTCCCAA
CTTGAGGTTGATTTTGTTGGCGAATAGCACTTCGAATATCATCGCCCCTA
TCCGGTCCCGTACCCTGCTGGTCAGGGTTGCTGCTCCGAGTGAGGAGGAT
ATCTGCACTGTTTTGAAGAACGCGGCTAAGAAGGAGGGATGGCCTGAGGC
GAGTGGGTTGAATAAGAGGATAGCTAAGGAGAGTGGGCGTAACCTTCGTC
GCGCGCTTCTAATGTTCGAGGCTATTTATGCTCAGAATGAGAAAGTTACG
GACAACACGCTCATCCCACCACCCGACTGGGAAGCGCTGATTGCGTTGAT
AGCTGAGGAGATCCTGGCAGAGCGGTCACCGGCTCGTCTGTTGCAAGTCC
GCGCACGGTTATACGATCTTTTGACGCATTGCATACCACCGACTACCATT
ATCAAGTGTCTGACATTCAACCTCATTACAAAGGTCGACGATGCTCTAAA
GCCCGATGTCATCAGGTGGTCGGCATTCTATGAGCACAGGATCACTCAAG
GCAGCAAAGTAATCTTTCACCTTGAGGCATTCGTTGCCAAGTTCATGCGC
ATATACGAAAGTTATCTGATGGGCATGGAATTCTAAATGGCCTTGCTAGT
CGACAAACTGCGACCGCGGTCGCTAGATGCCCTCACATACCACCCTGAGC
TGTCCGCGCGACTGAAATCATTGGCGCAAAGCGGCGACTTCCCTCATCTG
CTCATGTATGGTCCTTCAGGTGCAGGCAAAAAGACACGAACAATCGCGAC
GCTTAAAGAATTGTACGGTTCCGGAGTCGAAAAGATCAAGATCGACGCCA
GAGTCTTCCAAACGACAAGCAACCGCAAGCTCGAGTTCAACATAGTGTCT
TCGGTCTACCACTTGGAGATCACCCCATCGGATGTTGGGAACTACGATCG
TGTTGTGGTTCAAGAGCTGCTGAAGGAGATTGCACAAACCCAGCAGGTTG
ATCTCTCGGCGAAACAGCGCTTCAAAGTCGTTGTGATTAACGAGGCCGAT
CATCTCACCCGTGATGCACAGGCAGCGCTGAGACGGACGATGGAAAAATA
TAGTCCCAACTTGAGGTTGATTTTGTTGGCGAATAGCACTTCGAATATCA
TCGCCCCTATCCGGTCCCGTACCCTGCTGGTCAGGGTTGCTGCTCCGAGT
GAGGAGGATATCTGCACTGTTTTGAAGAACGCGGCTAAGAAGGAGGGATG
GCCTGAGGCGAGTGGGTTGAATAAGAGGATAGCTAAGGAGAGTGGGCGTA
ACCTTCGTCGCGCGCTTCTAATGTTCGAGGCTATTTATGCTCAGAATGAG
AAAGTTACGGACAACACGCTCATCCCACCACCCGACTGGGAAGCGCTGAT
TGCGTTGATAGCTGAGGAGATCCTGGCAGAGCGGTCACCGGCTCGTCTGT
TGCAAGTCCGCGCACGGTTATACGATCTTTTGACGCATTGCATACCACCG
ACTACCATTATCAAGTGTCTGACATTCAACCTCATTACAAAGGTCGACGA
TGCTCTAAAGCCCGATGTCATCAGGTGGTCGGCATTCTATGAGCACAGGA
TCACTCAAGGCAGCAAAGTAATCTTTCACCTTGAGGCATTCGTTGCCAAG
TTCATGCGCATATACGAAAGTTATCTGATGGGCATGGAATTCTAAATGGC
CTTGCTAGTCGACAAACTGCGACCGCGGTCGCTAGATGCCCTCACATACC
ACCCTGAGCTGTCCGCGCGACTGAAATCATTGGCGCAAAGCGGCGACTTC
CCTCATCTGCTCATGTATGGTCCTTCAGGTGCAGGCAAAAAGACACGAAC
AATCGCGACGCTTAAAGAATTGTACGGTTCCGGAGTCGAAAAGATCAAGA
TCGACGCCAGAGTCTTCCAAACGACAAGCAACCGCAAGCTCGAGTTCAAC
ATAGTGTCTTCGGTCTACCACTTGGAGATCACCCCATCGGATGTTGGGAA
CTACGATCGTGTTGTGGTTCAAGAGCTGCTGAAGGAGATTGCACAAACCC
AGCAGGTTGATCTCTCGGCGAAACAGCGCTTCAAAGTCGTTGTGATTAAC
GAGGCCGATCATCTCACCCGTGATGCACAGGCAGCGCTGAGACGGACGAT
GGAAAAATATAGTCCCAACTTGAGGTTGATTTTGTTGGCGAATAGCACTT
CGAATATCATCGCCCCTATCCGGTCCCGTACCCTGCTGGTCAGGGTTGCT
GCTCCGAGTGAGGAGGATATCTGCACTGTTTTGAAGAACGCGGCTAAGAA
GGAGGGATGGCCTGAGGCGAGTGGGTTGAATAAGAGGATAGCTAAGGAGA
GTGGGCGTAACCTTCGTCGCGCGCTTCTAATGTTCGAGGCTATTTATGCT
CAGAATGAGAAAGTTACGGACAACACGCTCATCCCACCACCCGACTGGGA
AGCGCTGATTGCGTTGATAGCTGAGGAGATCCTGGCAGAGCGGTCACCGG
CTCGTCTGTTGCAAGTCCGCGCACGGTTATACGATCTTTTGACGCATTGC
ATACCACCGACTACCATTATCAAGTGTCTGACATTCAACCTCATTACAAA
GGTCGACGATGCTCTAAAGCCCGATGTCATCAGGTGGTCGGCATTCTATG
AGCACAGGATCACTCAAGGCAGCAAAGTAATCTTTCACCTTGAGGCATTC
GTTGCCAAGTTCATGCGCATATACGAAAGTTATCTGATGGGCATGGAATT
CTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006256KJC3_006256Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006256-T1KJC3_006256-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006256-T1.utr5p1KJC3_006256-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006256-T1.exon1KJC3_006256-T1.exon1Aspergillus niger KJC3exon
KJC3_006256-T1.exon2KJC3_006256-T1.exon2Aspergillus niger KJC3exon
KJC3_006256-T1.exon3KJC3_006256-T1.exon3Aspergillus niger KJC3exon
KJC3_006256-T1.exon4KJC3_006256-T1.exon4Aspergillus niger KJC3exon
KJC3_006256-T1.exon5KJC3_006256-T1.exon5Aspergillus niger KJC3exon
KJC3_006256-T1.exon6KJC3_006256-T1.exon6Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006256-T1.cdsKJC3_006256-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006256-T1.utr3p1KJC3_006256-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09263OQH
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR008921
DBxrefInterPro:IPR003593
DBxrefPFAM:PF13177
DBxrefPFAM:PF00004
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5159440..5161027 +
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