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KJC3_006258-T1, KJC3_006258-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006258-T1
Unique NameKJC3_006258-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5162128..5163046-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006258-T1 ID=KJC3_006258-T1|Name=KJC3_006258-T1|organism=Aspergillus niger KJC3|type=mRNA|length=919bp|location=Sequence derived from alignment at ch4:5162128..5163046- (Aspergillus niger KJC3)
CCTGAAAGTCAGTCTGCGGTCCATCCATCATCCTTCCGGTCCCCCATCCA
GTCCAAGCAGGGCCGATTGCCACGATTCACAATGGGTCCGCAGCTGAAGA
TGTTCTCGGGGCCTCAGATGGCCTTCCTCCGGCCGTCGTGTGAGATTCCC
GCAAGCCTCCCCAAGAAAAGTTTTTTATATCCTGACTTCGATGCCGTACA
GTAGGTCTGTCGACGCCATTCACGGCTTTCCCTCTATCGCGATGCTTCTC
GACGACTTCGCCTGCCCTCGATTGGCTTACCCCTAAGTTCGCCGAGAGAT
CCAAGTCCCCTAAGGGTCGTCCGCATGTCGCAACTGGTGGTTCTTCCCGC
GGTACTACCGTCGTCTGGGGTGATTATGGCTTGCGGATGAAGGACCACGA
CCGTCGGTTGCCCGCTGCCTCGTTGAAAATTGCGGAGGATACGATTAAGA
GACGTCTGAGGGGTATGAACTACACATTGTACAAGCGCGTGAGCGCAAAC
ATCGGTGTCTACACCAAGGGCAACGAACAACGTATGGGTAAGGGTAAGGG
AAAGTTCGACTACTGGACGGCGAAGGTTGGCGTGAGCAGAATTGTCTTTG
AGCTCAAGGGTGATCTGCACGAAAAGGTCGCCAGGGAGGCCTTCCGTCTG
GCCGGCCACAAGCTGCCCGGTACGTTACATCCACCTGATGATATTCTCCA
ATTATCAACATACGGTAAACTAATTATACAACGGCTGCAGGCCTCTGGGA
ATTCGTGAAGAAGGGTGACCCGCCGGTCGTTGGACTGACGAAACTTGGCA
ACGGAGTGACTCTGGAGAGCCTCAAACGCGCACGCAGAAGCCCGGCCCTC
GGTACTCAGGACCTACCGAACCCCCCGACCTCGACCTCGTCCTCCTCCAG
TCCCTCTGCTCCCCAATAA
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Coding sequence (CDS) from alignment at ch4:5162128..5163046-

>KJC3_006258-T1 ID=KJC3_006258-T1|Name=KJC3_006258-T1|organism=Aspergillus niger KJC3|type=CDS|length=2115bp|location=Sequence derived from alignment at ch4:5162128..5163046- (Aspergillus niger KJC3)
GCCTCTGGGAATTCGTGAAGAAGGGTGACCCGCCGGTCGTTGGACTGACG
AAACTTGGCAACGGAGTGACTCTGGAGAGCCTCAAACGCGCACGCAGAAG
CCCGGCCCTCGGTACTCAGGACCTACCGAACCCCCCGACCTCGACCTCGT
CCTCCTCCAGTCCCTCTGCTCCCCAATAATAGGTCTGTCGACGCCATTCA
CGGCTTTCCCTCTATCGCGATGCTTCTCGACGACTTCGCCTGCCCTCGAT
TGGCTTACCCCTAAGTTCGCCGAGAGATCCAAGTCCCCTAAGGGTCGTCC
GCATGTCGCAACTGGTGGTTCTTCCCGCGGTACTACCGTCGTCTGGGGTG
ATTATGGCTTGCGGATGAAGGACCACGACCGTCGGTTGCCCGCTGCCTCG
TTGAAAATTGCGGAGGATACGATTAAGAGACGTCTGAGGGGTATGAACTA
CACATTGTACAAGCGCGTGAGCGCAAACATCGGTGTCTACACCAAGGGCA
ACGAACAACGTATGGGTAAGGGTAAGGGAAAGTTCGACTACTGGACGGCG
AAGGTTGGCGTGAGCAGAATTGTCTTTGAGCTCAAGGGTGATCTGCACGA
AAAGGTCGCCAGGGAGGCCTTCCGTCTGGCCGGCCACAAGCTGCCCGATG
GGTCCGCAGCTGAAGATGTTCTCGGGGCCTCAGATGGCCTTCCTCCGGCC
GTCGTGCCTCTGGGAATTCGTGAAGAAGGGTGACCCGCCGGTCGTTGGAC
TGACGAAACTTGGCAACGGAGTGACTCTGGAGAGCCTCAAACGCGCACGC
AGAAGCCCGGCCCTCGGTACTCAGGACCTACCGAACCCCCCGACCTCGAC
CTCGTCCTCCTCCAGTCCCTCTGCTCCCCAATAATAGGTCTGTCGACGCC
ATTCACGGCTTTCCCTCTATCGCGATGCTTCTCGACGACTTCGCCTGCCC
TCGATTGGCTTACCCCTAAGTTCGCCGAGAGATCCAAGTCCCCTAAGGGT
CGTCCGCATGTCGCAACTGGTGGTTCTTCCCGCGGTACTACCGTCGTCTG
GGGTGATTATGGCTTGCGGATGAAGGACCACGACCGTCGGTTGCCCGCTG
CCTCGTTGAAAATTGCGGAGGATACGATTAAGAGACGTCTGAGGGGTATG
AACTACACATTGTACAAGCGCGTGAGCGCAAACATCGGTGTCTACACCAA
GGGCAACGAACAACGTATGGGTAAGGGTAAGGGAAAGTTCGACTACTGGA
CGGCGAAGGTTGGCGTGAGCAGAATTGTCTTTGAGCTCAAGGGTGATCTG
CACGAAAAGGTCGCCAGGGAGGCCTTCCGTCTGGCCGGCCACAAGCTGCC
CGATGGGTCCGCAGCTGAAGATGTTCTCGGGGCCTCAGATGGCCTTCCTC
CGGCCGTCGTGCCTCTGGGAATTCGTGAAGAAGGGTGACCCGCCGGTCGT
TGGACTGACGAAACTTGGCAACGGAGTGACTCTGGAGAGCCTCAAACGCG
CACGCAGAAGCCCGGCCCTCGGTACTCAGGACCTACCGAACCCCCCGACC
TCGACCTCGTCCTCCTCCAGTCCCTCTGCTCCCCAATAATAGGTCTGTCG
ACGCCATTCACGGCTTTCCCTCTATCGCGATGCTTCTCGACGACTTCGCC
TGCCCTCGATTGGCTTACCCCTAAGTTCGCCGAGAGATCCAAGTCCCCTA
AGGGTCGTCCGCATGTCGCAACTGGTGGTTCTTCCCGCGGTACTACCGTC
GTCTGGGGTGATTATGGCTTGCGGATGAAGGACCACGACCGTCGGTTGCC
CGCTGCCTCGTTGAAAATTGCGGAGGATACGATTAAGAGACGTCTGAGGG
GTATGAACTACACATTGTACAAGCGCGTGAGCGCAAACATCGGTGTCTAC
ACCAAGGGCAACGAACAACGTATGGGTAAGGGTAAGGGAAAGTTCGACTA
CTGGACGGCGAAGGTTGGCGTGAGCAGAATTGTCTTTGAGCTCAAGGGTG
ATCTGCACGAAAAGGTCGCCAGGGAGGCCTTCCGTCTGGCCGGCCACAAG
CTGCCCGATGGGTCCGCAGCTGAAGATGTTCTCGGGGCCTCAGATGGCCT
TCCTCCGGCCGTCGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0019843rRNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006258KJC3_006258Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006258-T1KJC3_006258-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006258-T1.cdsKJC3_006258-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006258-T1.exon3KJC3_006258-T1.exon3Aspergillus niger KJC3exon
KJC3_006258-T1.exon2KJC3_006258-T1.exon2Aspergillus niger KJC3exon
KJC3_006258-T1.exon1KJC3_006258-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006258-T1.utr5p1KJC3_006258-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264T3S
DBxrefInterPro:IPR020798
DBxrefInterPro:IPR016180
DBxrefInterPro:IPR036920
DBxrefInterPro:IPR000114
DBxrefPFAM:PF00252
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5162128..5163046 -
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