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KJC3_006265-T1, KJC3_006265-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006265-T1
Unique NameKJC3_006265-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5178955..5180545+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006265-T1 ID=KJC3_006265-T1|Name=KJC3_006265-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1591bp|location=Sequence derived from alignment at ch4:5178955..5180545+ (Aspergillus niger KJC3)
CTTTCTCTCCCAACCACCACATCACCACGACCACAAACCCACAAACATGG
CCCTGGTCGCCTACTCCGACTCAGAAGCCTCCGACTCGGAGCCCGAAACC
ACCGCCCCCCAACCCCAACAAGCCCCCAAGAAACCCACCACCTCAACAAC
CGCAACCACCAGCAATACCAACACCAACAACAAACCCCCCATCCAACCCC
TCGTCGACCGCACCAACCCGCGCAAAATCCGCGTCGCATTACCAGACGTC
AAACCCGAACACAACGACGACACTGATGGCCCGCGCAAGAAACCCAAACT
AGGCGGCGGAGGCGGTGCATTCTCCGGCTTTAACTCGTTTCTACCTGCGC
CAAAGAAAACAGCTACCACCGCAAGCAGCAATGCTTCAGAGAAGAAGGCG
CCCGCGCGCAAGATATTCAGTCTGAAGACGGGCGCAGCGCCGGGGTTCGA
TCGCGAGGCGGATGCGGAGATGCGAAATGAGCGGGCGTTTGGGGCGTTAG
GAGGAGATGGAGATGAAGATGAGACGATACCCAAGGCGGGGAGTATGAGA
GATAAGGAATTGGATTTCGGGAAGGATAGTGAAGACCAAAAGGAGGAGGC
TGTGCCGCAGATGAAGAAGCCAGAGGAAGTCAAGTTGAAGGGCAACCCGA
TGATGTTCAAGCCGTTGTCTGTAGGGAGGGCGCAGCAGAAGAAGAGGAAA
GCTGTTTCGGATTTGATGCCTGCTGCTGCGGCTGTACGGAGGAAGGAGAA
TGTGTCGACAGCTTCATCTGCATCTGCATCTGTTCAGGAGACACCTACAG
CTGCAGCGCCAGCACCACCCAAACCCAAAATCAGCCTCTTCTCACTCTCC
GCCAACGACGACTCTACACCCACCACATCGACAGCACCATCAGCAACAAC
CTACGAGCCCCTAGTCTACACCCCCCTCAATACTGCCCCCGCCGGCCCCT
CCCCCGCCCCCGAAGACACCACCACCACCACCACCACCACCACACAGCAA
TCCACATACCAACCCGCCTCAACAACATCAGACAACACCCTCAGCACCAT
CGCCGACGACCTCAACCTCTCCAAAGCCCAACGGCGCCAACTATTCGGCC
GCAACGCCCCCGAATCCGTGGCAGCCAGTTCCCGTGTCCTGCACTTCAAC
ACGGACCAAGAGTACGTCACGAACCAGGAGCTTGCGCACACGGAGCTGGC
GGCGCAGCAGCATAACCCCGTCAGGGCCATTGCGCCGGGTAAGCATACAC
TGCAGCAGTTGGTTAATGCGGCGAGTACGCAGCGCGAGGCGCTGGAGGAG
AGCTTTGCTGCTGGGAGGAGGAATAAGAGGGAGGCGGGAGCGAAGTATGG
GTGGTAATTTCTCTCATAGGGTATTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGGATAGTGTAGGTTTAGTGGTTGTTGGTGGGAGAGGAGTTGCATG
GAAGGAGTTCATAATCATAGTTTGATTTTGTAATGAGTTTGATTGATGGT
AGGAATTGAGTATCAGAAGATAGATATAGCACTATAAGATACTGGAACTG
CCAATTGTTATTTGGAGATGAAGAAATGATTAAAATAACTG
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Coding sequence (CDS) from alignment at ch4:5178955..5180545+

>KJC3_006265-T1 ID=KJC3_006265-T1|Name=KJC3_006265-T1|organism=Aspergillus niger KJC3|type=CDS|length=1311bp|location=Sequence derived from alignment at ch4:5178955..5180545+ (Aspergillus niger KJC3)
ATGGCCCTGGTCGCCTACTCCGACTCAGAAGCCTCCGACTCGGAGCCCGA
AACCACCGCCCCCCAACCCCAACAAGCCCCCAAGAAACCCACCACCTCAA
CAACCGCAACCACCAGCAATACCAACACCAACAACAAACCCCCCATCCAA
CCCCTCGTCGACCGCACCAACCCGCGCAAAATCCGCGTCGCATTACCAGA
CGTCAAACCCGAACACAACGACGACACTGATGGCCCGCGCAAGAAACCCA
AACTAGGCGGCGGAGGCGGTGCATTCTCCGGCTTTAACTCGTTTCTACCT
GCGCCAAAGAAAACAGCTACCACCGCAAGCAGCAATGCTTCAGAGAAGAA
GGCGCCCGCGCGCAAGATATTCAGTCTGAAGACGGGCGCAGCGCCGGGGT
TCGATCGCGAGGCGGATGCGGAGATGCGAAATGAGCGGGCGTTTGGGGCG
TTAGGAGGAGATGGAGATGAAGATGAGACGATACCCAAGGCGGGGAGTAT
GAGAGATAAGGAATTGGATTTCGGGAAGGATAGTGAAGACCAAAAGGAGG
AGGCTGTGCCGCAGATGAAGAAGCCAGAGGAAGTCAAGTTGAAGGGCAAC
CCGATGATGTTCAAGCCGTTGTCTGTAGGGAGGGCGCAGCAGAAGAAGAG
GAAAGCTGTTTCGGATTTGATGCCTGCTGCTGCGGCTGTACGGAGGAAGG
AGAATGTGTCGACAGCTTCATCTGCATCTGCATCTGTTCAGGAGACACCT
ACAGCTGCAGCGCCAGCACCACCCAAACCCAAAATCAGCCTCTTCTCACT
CTCCGCCAACGACGACTCTACACCCACCACATCGACAGCACCATCAGCAA
CAACCTACGAGCCCCTAGTCTACACCCCCCTCAATACTGCCCCCGCCGGC
CCCTCCCCCGCCCCCGAAGACACCACCACCACCACCACCACCACCACACA
GCAATCCACATACCAACCCGCCTCAACAACATCAGACAACACCCTCAGCA
CCATCGCCGACGACCTCAACCTCTCCAAAGCCCAACGGCGCCAACTATTC
GGCCGCAACGCCCCCGAATCCGTGGCAGCCAGTTCCCGTGTCCTGCACTT
CAACACGGACCAAGAGTACGTCACGAACCAGGAGCTTGCGCACACGGAGC
TGGCGGCGCAGCAGCATAACCCCGTCAGGGCCATTGCGCCGGGTAAGCAT
ACACTGCAGCAGTTGGTTAATGCGGCGAGTACGCAGCGCGAGGCGCTGGA
GGAGAGCTTTGCTGCTGGGAGGAGGAATAAGAGGGAGGCGGGAGCGAAGT
ATGGGTGGTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006265KJC3_006265Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006265-T1.utr5p1KJC3_006265-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006265-T1.exon1KJC3_006265-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006265-T1.cdsKJC3_006265-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006265-T1.utr3p1KJC3_006265-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006265-T1KJC3_006265-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR018800
DBxrefPFAM:PF10253
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5178955..5180545 +
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