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KJC3_006271-T1, KJC3_006271-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006271-T1
Unique NameKJC3_006271-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5204731..5206262-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006271-T1 ID=KJC3_006271-T1|Name=KJC3_006271-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1532bp|location=Sequence derived from alignment at ch4:5204731..5206262- (Aspergillus niger KJC3)
CTCAGATCCGCCTCGCTGCCATCCATTTCACCTCGGTGATTCCCTCTTTA
CTCACCAATTACCCAGGGTATTCTTTTAACCTTTTCGGAGTCACTCGCGC
CCCCGCACTATAAGTACCCCCCCTACTCGCGCATCTCCGAACACCCTAAA
ATCATCCCCAACCTGTTCGCTCCTCCGACATCCCTTGACCATCAACCAAC
ACCACAACAACACTCATCAATTGCACCACTCAAAGCTACCATCATCTACC
TCTCACTCACCACACCAATCCACCACAATGGAAGAAAGCCGCCAACCCTC
CACGACCTCCAACCCCCCCAGCGTCGAAAACGCCTACAAACGCAAATGCC
TGGCCCTAAAGAAGCGCCTCAACGAAATCGAAGAAGAAAACGAAATGATG
CGTCTCCGTAACCGTCGCGGCTGGCAATACATCCAGAAAATGCGCCTCGA
GTCATGCATTCTCCTGGAACGGTTGGCCAAAGTCACCGGCATGACGGAGG
AGGCGCAGGCAGGCGTGAACCCGGAACTGCGCGCTCGAGCATCAGCGATG
ATGACGAATGTTGCGGCGGTAACGGGCGGAGAGGCGGGGAAGAACGGTGC
TGCTGGTGTGCCACAGTCTCTGGAGGATGAGACGGAGGGGAGCTCGGATG
AGCAGCCGCCTACTGTAAGTTCTTGTCTTTTCATCTACCTTCCTGTGGTA
TATATATTTCGGGTTGAAGGTTTTCGCTAATGGTAATGGTGATGATTATG
TACAGCCCCAGGAACGGCCTCTGCGTGTGAAGCGATCCAGGAAATCCAAC
TTGCCCAATGACGCTAATGTGGAGGATGAGGCGGCCAACAATGATACCAA
CAATGACAGCAACAGCAAAGAGAAGGAGAAGGAGAAAGACGCCAAGGATA
AGGACGCGACGGAATCTGGCGCCGCAGCTGATGGTGATAACGGTAATGGA
GATTCGTCCTCCTCGTTGCCGCGACTAGCCCCCGCCCCGTCGCAGGACGA
AATGACCTCTTCCTTCCGCATTCAACCGGGTAGTAACGGGTCCCCGAATG
ATAAGGAGGGTGCTAGTGATCGCGGGAGCCATAACCCCGAGTCTGCGGAG
CAGAGGGGTGATGGTGCGGAGGATGAGACGACGCCGATGGATATGGATGC
GAAGGAGGAACTTAAGGAGGAGAGGGAGGGGTGATTAACTATACCATAAC
CATACCCTAGACTTTTCATTTTTTTTTTCTTCTCTTTTCTTATTCCTACT
ATTATATGGAATGTTTCCGTTTCGTGGTGCTCTATATTCTTGTGTTATCG
TGGTAATGGGTGTTATTGATCTCTGGGTTATTATTTTTCTGTCTTGGGGG
TGAGGGCCTCTGTTGTTGTTTCTGGCCCCTCTTTTTCTCTCTATTCATTC
TTCCTTTCTGTTCTATAGTATACGCTGGGCAAAAGCGGTACTCTCTTCTT
GTGTGTATGTGTAAGAGGGGGAGTAGGAGGTATATCTGCCTACTTATAGA
ATAGTCATCATTCGATCTGTGTAACCAGTAGA
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Coding sequence (CDS) from alignment at ch4:5204731..5206262-

>KJC3_006271-T1 ID=KJC3_006271-T1|Name=KJC3_006271-T1|organism=Aspergillus niger KJC3|type=CDS|length=1632bp|location=Sequence derived from alignment at ch4:5204731..5206262- (Aspergillus niger KJC3)
CCCCAGGAACGGCCTCTGCGTGTGAAGCGATCCAGGAAATCCAACTTGCC
CAATGACGCTAATGTGGAGGATGAGGCGGCCAACAATGATACCAACAATG
ACAGCAACAGCAAAGAGAAGGAGAAGGAGAAAGACGCCAAGGATAAGGAC
GCGACGGAATCTGGCGCCGCAGCTGATGGTGATAACGGTAATGGAGATTC
GTCCTCCTCGTTGCCGCGACTAGCCCCCGCCCCGTCGCAGGACGAAATGA
CCTCTTCCTTCCGCATTCAACCGGGTAGTAACGGGTCCCCGAATGATAAG
GAGGGTGCTAGTGATCGCGGGAGCCATAACCCCGAGTCTGCGGAGCAGAG
GGGTGATGGTGCGGAGGATGAGACGACGCCGATGGATATGGATGCGAAGG
AGGAACTTAAGGAGGAGAGGGAGGGGTGAATGGAAGAAAGCCGCCAACCC
TCCACGACCTCCAACCCCCCCAGCGTCGAAAACGCCTACAAACGCAAATG
CCTGGCCCTAAAGAAGCGCCTCAACGAAATCGAAGAAGAAAACGAAATGA
TGCGTCTCCGTAACCGTCGCGGCTGGCAATACATCCAGAAAATGCGCCTC
GAGTCATGCATTCTCCTGGAACGGTTGGCCAAAGTCACCGGCATGACGGA
GGAGGCGCAGGCAGGCGTGAACCCGGAACTGCGCGCTCGAGCATCAGCGA
TGATGACGAATGTTGCGGCGGTAACGGGCGGAGAGGCGGGGAAGAACGGT
GCTGCTGGTGTGCCACAGTCTCTGGAGGATGAGACGGAGGGGAGCTCGGA
TGAGCAGCCGCCTACTCCCCAGGAACGGCCTCTGCGTGTGAAGCGATCCA
GGAAATCCAACTTGCCCAATGACGCTAATGTGGAGGATGAGGCGGCCAAC
AATGATACCAACAATGACAGCAACAGCAAAGAGAAGGAGAAGGAGAAAGA
CGCCAAGGATAAGGACGCGACGGAATCTGGCGCCGCAGCTGATGGTGATA
ACGGTAATGGAGATTCGTCCTCCTCGTTGCCGCGACTAGCCCCCGCCCCG
TCGCAGGACGAAATGACCTCTTCCTTCCGCATTCAACCGGGTAGTAACGG
GTCCCCGAATGATAAGGAGGGTGCTAGTGATCGCGGGAGCCATAACCCCG
AGTCTGCGGAGCAGAGGGGTGATGGTGCGGAGGATGAGACGACGCCGATG
GATATGGATGCGAAGGAGGAACTTAAGGAGGAGAGGGAGGGGTGAATGGA
AGAAAGCCGCCAACCCTCCACGACCTCCAACCCCCCCAGCGTCGAAAACG
CCTACAAACGCAAATGCCTGGCCCTAAAGAAGCGCCTCAACGAAATCGAA
GAAGAAAACGAAATGATGCGTCTCCGTAACCGTCGCGGCTGGCAATACAT
CCAGAAAATGCGCCTCGAGTCATGCATTCTCCTGGAACGGTTGGCCAAAG
TCACCGGCATGACGGAGGAGGCGCAGGCAGGCGTGAACCCGGAACTGCGC
GCTCGAGCATCAGCGATGATGACGAATGTTGCGGCGGTAACGGGCGGAGA
GGCGGGGAAGAACGGTGCTGCTGGTGTGCCACAGTCTCTGGAGGATGAGA
CGGAGGGGAGCTCGGATGAGCAGCCGCCTACT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006271KJC3_006271Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006271-T1KJC3_006271-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006271-T1.cdsKJC3_006271-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006271-T1.utr3p1KJC3_006271-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006271-T1.exon2KJC3_006271-T1.exon2Aspergillus niger KJC3exon
KJC3_006271-T1.exon1KJC3_006271-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006271-T1.utr5p1KJC3_006271-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5204731..5206262 -
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