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KJC3_006275-T1, KJC3_006275-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006275-T1
Unique NameKJC3_006275-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5215013..5217271-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006275-T1 ID=KJC3_006275-T1|Name=KJC3_006275-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2259bp|location=Sequence derived from alignment at ch4:5215013..5217271- (Aspergillus niger KJC3)
CCCGCTCTTCATCGTCTCCCCTGTCTCACCTGCGTCTCCGGGCCTATCTT
CGTCTTCCAGCTTGCTTGTCCGCCCTTTTACATAGACGCCATCGCCGCTG
CAGCGGGATTAGGGGCATATCGAGCATCTTGGTCTTGGAATTGGCAACAT
GATTGAAACCCTCTAGAGCACGGACAAAGCTCTGGAACAAGAGGCCGACC
ATGGAGGGACTCTTCACTTTGCTCGCATTGAGCATTGTGATGGCCATTAC
GTGAGTCGACTGCCCTTTGGAACTTGTCGCCTGCTTGGTGCGAATTGCCA
ATGCTAATTTTCTTTCCCCCGCTACGTCACATAGATCATTTGTCGTGGGA
TCACTACCGCTCGCTTTCACACTTTCCCCTTCTCAGCTGAGATTAATATC
CTCCCTTGGTATGGGAGTTTTGGTTGGGACATCTTTGATCGTTATAATTC
CGGAGGGAGTCGAAACTCTATACAGCGCAAACTCGCTTAGCAACCGGAAA
GAACTTAGCAGCCGATCGACGACTGCCGTCAATTGGCAACACCAGGCTGT
ACCGGTGACCACTGTCCCGAGGGCATTGGAAGAACCAGACTCCTCAGACG
TCCAGCTCACGCCTCGATCGGTACTATCCGATCTGCCATCCGCACCTGTC
ACGGTACCTACAATCCATTCCACACAAGATGAAAAGCTCAGACTACTGGG
ACGCAAGGACGATACATCGGGCGATCACGCAGACGAGGATCACGATGAAG
ATAACTCGCCCCATGCTTGGATAGGTATTGCACTCATCAGTGGCTTTATC
CTGATGTACCTGATCGATAAATTGCCCGTTTTCGCATCATCCTCCAAACA
GGAGCGAATTCCCTATCATATATCGCTAGATAACTTGGGCTCTGGTCTGC
GGCGCAATTCGTCGCCGTCACGCGAGGGGGGCTTGCTCGATGCCGGTAAT
ATTCCCAGGAGAAGCCACAGCTTTGCAACGACAACTGGACTTGTCATTCA
TGCCGCCGCCGATGGAATTGCATTGGGTGCATCTAGCTCCGACACTGGTC
TGAGCTTCATCATCTTCCTGGCCATCATGGTTCACAAGGCCCCAGCATCA
TTTGGCCTCACCTCGGTGCTACTGAAGCAGGGCCTTTCTAGTCGTACCGC
TAGAGCGCATCTATTGATTTTCAGTCTGGCTGCTCCTGTGGGTGCTCTCA
TGACATTCTTGTTTGTGCAAATCATGGGCTCGGGGTCGGGAGGTGATGAC
GTCGGGAACCGCTGGCGAACCGGTGTACTCCTCTTGTTCTCTGCTGGCAC
ATTCCTGTAAGTTCTTCCTTGGCTCAATTATACGGTACAGGGTGATACTG
ATGTCTTTAGATACGTTGCTATGCACACGATGCAGGAAAACAGCCCGAAC
TCATCTTCACGTGAGTCTCAGGTCAACGGATACGGCGATCATAGAGAAGC
ACCATCAGCATCGGACAAGTCTATGAGGGACCTGATCGCTTCTGTTGTTG
GCATGGTTCTTCCACTGTTCCTACAGATCGGCCATGCCCACTAGATTCTC
TCAACATCCATTTCTGGATTTACACCATGTCTCTTCTCTTCCTTCTACCT
CTAGCTCTCCTCGGCCAACGAGCTACATACCGGTTCAAAAACGGACGGTT
TGTGTCTGTAGACACCGTGAGGTTGTCTTGTGTAATAGATTTTGACAGTT
GTTACTGGACGGATTCCCAAGCTTGGGGAACTGCGGCGATTTGTGTTATA
TTCCCTGCGGGGTTATGCCTTTCTTGTTGTATTGTCATTGAGTCAGCGCC
GCCACACGTCATGGCCACGATTTTGAAGCATTTGCACGGTGCGGTTGAAT
CCTTTACTTTGATCATAATTGCATGTGTCCTTTACTTTTTGATTTGTTTC
GTTCCTTCCTCCCCCCACGATCACGTTTACGTAGATTGGCTCAGACGTGG
AAGGTATAAACTCTCGGAGAATCATGTCTGCCCTCCATTGAAAGAGTGAT
GAAAATATTCGGCAAGACTGAATCATTATCAGTTCCCTGGAGGCACCTGC
ACGGATCCATGGTTGTACGACGCATGCCGTTCTTACCACTCCCGCCTTCA
GACCACTATATCTTCTGCGACTTGCAGTGGAACCGAAAAGTTAGACCGAA
GCACCAGAGACATCATGCTCGATTCGGGCAGGTGCCTTGCTTTTTGAAAC
GGTTCTCTCTGTGGTAGAGTACGTACTATTTTTTTCTTCTTGGCCTTGAG
ATGGGTGAG
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Coding sequence (CDS) from alignment at ch4:5215013..5217271-

>KJC3_006275-T1 ID=KJC3_006275-T1|Name=KJC3_006275-T1|organism=Aspergillus niger KJC3|type=CDS|length=3618bp|location=Sequence derived from alignment at ch4:5215013..5217271- (Aspergillus niger KJC3)
ATACGTTGCTATGCACACGATGCAGGAAAACAGCCCGAACTCATCTTCAC
GTGAGTCTCAGGTCAACGGATACGGCGATCATAGAGAAGCACCATCAGCA
TCGGACAAGTCTATGAGGGACCTGATCGCTTCTGTTGTTGGCATGGTTCT
TCCACTGTTCCTACAGATCGGCCATGCCCACTAGATCATTTGTCGTGGGA
TCACTACCGCTCGCTTTCACACTTTCCCCTTCTCAGCTGAGATTAATATC
CTCCCTTGGTATGGGAGTTTTGGTTGGGACATCTTTGATCGTTATAATTC
CGGAGGGAGTCGAAACTCTATACAGCGCAAACTCGCTTAGCAACCGGAAA
GAACTTAGCAGCCGATCGACGACTGCCGTCAATTGGCAACACCAGGCTGT
ACCGGTGACCACTGTCCCGAGGGCATTGGAAGAACCAGACTCCTCAGACG
TCCAGCTCACGCCTCGATCGGTACTATCCGATCTGCCATCCGCACCTGTC
ACGGTACCTACAATCCATTCCACACAAGATGAAAAGCTCAGACTACTGGG
ACGCAAGGACGATACATCGGGCGATCACGCAGACGAGGATCACGATGAAG
ATAACTCGCCCCATGCTTGGATAGGTATTGCACTCATCAGTGGCTTTATC
CTGATGTACCTGATCGATAAATTGCCCGTTTTCGCATCATCCTCCAAACA
GGAGCGAATTCCCTATCATATATCGCTAGATAACTTGGGCTCTGGTCTGC
GGCGCAATTCGTCGCCGTCACGCGAGGGGGGCTTGCTCGATGCCGGTAAT
ATTCCCAGGAGAAGCCACAGCTTTGCAACGACAACTGGACTTGTCATTCA
TGCCGCCGCCGATGGAATTGCATTGGGTGCATCTAGCTCCGACACTGGTC
TGAGCTTCATCATCTTCCTGGCCATCATGGTTCACAAGGCCCCAGCATCA
TTTGGCCTCACCTCGGTGCTACTGAAGCAGGGCCTTTCTAGTCGTACCGC
TAGAGCGCATCTATTGATTTTCAGTCTGGCTGCTCCTGTGGGTGCTCTCA
TGACATTCTTGTTTGTGCAAATCATGGGCTCGGGGTCGGGAGGTGATGAC
GTCGGGAACCGCTGGCGAACCGGTGTACTCCTCTTGTTCTCTGCTGGCAC
ATTCCTATGGAGGGACTCTTCACTTTGCTCGCATTGAGCATTGTGATGGC
CATTACATACGTTGCTATGCACACGATGCAGGAAAACAGCCCGAACTCAT
CTTCACGTGAGTCTCAGGTCAACGGATACGGCGATCATAGAGAAGCACCA
TCAGCATCGGACAAGTCTATGAGGGACCTGATCGCTTCTGTTGTTGGCAT
GGTTCTTCCACTGTTCCTACAGATCGGCCATGCCCACTAGATCATTTGTC
GTGGGATCACTACCGCTCGCTTTCACACTTTCCCCTTCTCAGCTGAGATT
AATATCCTCCCTTGGTATGGGAGTTTTGGTTGGGACATCTTTGATCGTTA
TAATTCCGGAGGGAGTCGAAACTCTATACAGCGCAAACTCGCTTAGCAAC
CGGAAAGAACTTAGCAGCCGATCGACGACTGCCGTCAATTGGCAACACCA
GGCTGTACCGGTGACCACTGTCCCGAGGGCATTGGAAGAACCAGACTCCT
CAGACGTCCAGCTCACGCCTCGATCGGTACTATCCGATCTGCCATCCGCA
CCTGTCACGGTACCTACAATCCATTCCACACAAGATGAAAAGCTCAGACT
ACTGGGACGCAAGGACGATACATCGGGCGATCACGCAGACGAGGATCACG
ATGAAGATAACTCGCCCCATGCTTGGATAGGTATTGCACTCATCAGTGGC
TTTATCCTGATGTACCTGATCGATAAATTGCCCGTTTTCGCATCATCCTC
CAAACAGGAGCGAATTCCCTATCATATATCGCTAGATAACTTGGGCTCTG
GTCTGCGGCGCAATTCGTCGCCGTCACGCGAGGGGGGCTTGCTCGATGCC
GGTAATATTCCCAGGAGAAGCCACAGCTTTGCAACGACAACTGGACTTGT
CATTCATGCCGCCGCCGATGGAATTGCATTGGGTGCATCTAGCTCCGACA
CTGGTCTGAGCTTCATCATCTTCCTGGCCATCATGGTTCACAAGGCCCCA
GCATCATTTGGCCTCACCTCGGTGCTACTGAAGCAGGGCCTTTCTAGTCG
TACCGCTAGAGCGCATCTATTGATTTTCAGTCTGGCTGCTCCTGTGGGTG
CTCTCATGACATTCTTGTTTGTGCAAATCATGGGCTCGGGGTCGGGAGGT
GATGACGTCGGGAACCGCTGGCGAACCGGTGTACTCCTCTTGTTCTCTGC
TGGCACATTCCTATGGAGGGACTCTTCACTTTGCTCGCATTGAGCATTGT
GATGGCCATTACATACGTTGCTATGCACACGATGCAGGAAAACAGCCCGA
ACTCATCTTCACGTGAGTCTCAGGTCAACGGATACGGCGATCATAGAGAA
GCACCATCAGCATCGGACAAGTCTATGAGGGACCTGATCGCTTCTGTTGT
TGGCATGGTTCTTCCACTGTTCCTACAGATCGGCCATGCCCACTAGATCA
TTTGTCGTGGGATCACTACCGCTCGCTTTCACACTTTCCCCTTCTCAGCT
GAGATTAATATCCTCCCTTGGTATGGGAGTTTTGGTTGGGACATCTTTGA
TCGTTATAATTCCGGAGGGAGTCGAAACTCTATACAGCGCAAACTCGCTT
AGCAACCGGAAAGAACTTAGCAGCCGATCGACGACTGCCGTCAATTGGCA
ACACCAGGCTGTACCGGTGACCACTGTCCCGAGGGCATTGGAAGAACCAG
ACTCCTCAGACGTCCAGCTCACGCCTCGATCGGTACTATCCGATCTGCCA
TCCGCACCTGTCACGGTACCTACAATCCATTCCACACAAGATGAAAAGCT
CAGACTACTGGGACGCAAGGACGATACATCGGGCGATCACGCAGACGAGG
ATCACGATGAAGATAACTCGCCCCATGCTTGGATAGGTATTGCACTCATC
AGTGGCTTTATCCTGATGTACCTGATCGATAAATTGCCCGTTTTCGCATC
ATCCTCCAAACAGGAGCGAATTCCCTATCATATATCGCTAGATAACTTGG
GCTCTGGTCTGCGGCGCAATTCGTCGCCGTCACGCGAGGGGGGCTTGCTC
GATGCCGGTAATATTCCCAGGAGAAGCCACAGCTTTGCAACGACAACTGG
ACTTGTCATTCATGCCGCCGCCGATGGAATTGCATTGGGTGCATCTAGCT
CCGACACTGGTCTGAGCTTCATCATCTTCCTGGCCATCATGGTTCACAAG
GCCCCAGCATCATTTGGCCTCACCTCGGTGCTACTGAAGCAGGGCCTTTC
TAGTCGTACCGCTAGAGCGCATCTATTGATTTTCAGTCTGGCTGCTCCTG
TGGGTGCTCTCATGACATTCTTGTTTGTGCAAATCATGGGCTCGGGGTCG
GGAGGTGATGACGTCGGGAACCGCTGGCGAACCGGTGTACTCCTCTTGTT
CTCTGCTGGCACATTCCTATGGAGGGACTCTTCACTTTGCTCGCATTGAG
CATTGTGATGGCCATTAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0046873metal ion transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0030001metal ion transport
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006275KJC3_006275Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006275-T1KJC3_006275-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006275-T1.cdsKJC3_006275-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006275-T1.utr3p2KJC3_006275-T1.utr3p2Aspergillus niger KJC3three_prime_UTR
KJC3_006275-T1.utr3p1KJC3_006275-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006275-T1.exon4KJC3_006275-T1.exon4Aspergillus niger KJC3exon
KJC3_006275-T1.exon3KJC3_006275-T1.exon3Aspergillus niger KJC3exon
KJC3_006275-T1.exon2KJC3_006275-T1.exon2Aspergillus niger KJC3exon
KJC3_006275-T1.exon1KJC3_006275-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006275-T1.utr5p1KJC3_006275-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR003689
DBxrefPFAM:PF02535
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5215013..5217271 -
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