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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5223825..5225973+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006280-T1 ID=KJC3_006280-T1|Name=KJC3_006280-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2149bp|location=Sequence derived from alignment at ch4:5223825..5225973+ (Aspergillus niger KJC3)
ATGCCGCGAACGACCCTGGTACTTGATGGACTGTGGTATTGTCTTTGTCC
GTCGTTTAATGCTGCAACCTTCAATCGAGTCACACCTTCCTTCACAGCAG
GGAGACGCATCCCTAAACATAATCGCATAACCGCTCTACGAAGCTCAATT
TCGGATCCTCCGCGAAGATGCCTCACCAACCTCACCCCACGACCGACCGA
TGCAGCCATTGAAATTGTCGAAGATGATACCCGCAGAAATACAGATTCCG
AATCAACCTCCGATCAACAACCCTTCGATCCTGACGATGCAGGCGCGCAG
GATGATGTACGTCCAGGGGACCTTTTATCGCCAATGGAGCGCTTGACCAA
GCCGCCACCGGGCGTACCCAAGTATTTCAAACACTTGCCTTCGCAACGTT
TAGAAAATAGACTACAGGAGCGAGTAGCTCGATATCCAAGGGTTCTGAGC
GCAACCCAAATCCTGCGCGTTCTAATCCGAGACCGCCATGTTCGCCCGGA
GATGCGACATTACCGGGGGTTAATTCTCGCCAATTCGGACCCTGAACGTG
GGTCGCCACAGGCTGTTCGCGCGTTGCTCAAGGAGATGGAGGAGAATGGG
ATTCCGGCTGATTCGGGGACACTTCATGCAGCATTGCAGGTATGATCTTC
GATTCCGGGAACGGGGCACTTGCTGACCCACTCGCTTCTATTTGCAGGTC
CTTGCTGTTCATCCGGATTACCTCCTACGTCAGGAGATTGTGCGCACGCT
TCGAGACCGATGGCTTCCGCTGAGCCCGGCCGGATGGCACTTTGTAGTCG
CTGGGTTGATTCGAGAGCATCAGTTCGAGCTGGCGTTGGATCATGTCGAG
CAGATGGAGAGAAAGGGCATGGTGGTCGAGAGTTGGCTGCATAGCCTACT
TATCTATTACCTTTCCGATTTTGGAGAGTTCGACGAGGTGGTCCGGTTGA
TGCGTTCACGGACAAGCCAGGGTCTGGATATGAGCTCGGAGTTGTGGTTG
CACGTGCTGGAGGTGGCGAGCGCTGCTCTTCACTACGATACTACACGGTA
CATCTGGAGACAGATGGTGGAGCTGAGATATCTTCACCCTGGTTATCCAC
TGTGCAGCAATGTCCTCAGTGTGGCGGCGCGCGCTGGAGATACTGAGCTT
GCGGCATCGGTGATCCGCTTCCTCGTTGAGGTCAACATGCAGCCCCAACT
GGATGACTACGAGAGAATGGTGGAAGCCCATGCTGTGTCGGGGTCCTTGT
ATTCTGCGTTTGAGGTGCTGTGTAAGATGCATATGGCGGACATTGCGGTA
GAAGACCGCTCTACGCGTGCCATTCTTACACATCTGCTGCAGAGTAGAAC
AACCCCACGGGGCGCATGGACAATGCTCAAACAACTGAAGGCCACCAAAC
TGACAGTCCCGCTTGGCTGCGCCAAAGTGGTGCTGGAGATGTGCGAGCAG
GAAGCCCTCGATAACCCGTCGGTGGTGGACGAGGGAATCGCGTTCTACAA
GGAACTATATGCGCTCTGTCCAGATAAGGCTGACGTTTCTGTCTACAACA
TTCTCCTCGGTATGTGTCAACGGGCGCGCAATACCGAGGCGGGCATGTTC
ATCGCAAAAGAGATGGCATCCCTTGGCGTGATTCCAGACCAAGGGACGTT
TGAACATCTCATCGTCATGTGCCTGGAAGCAGGCAATTTTGAGTCCGGGT
ACATGTACCTGCAAGATCTGCTGGGACGAGGGATCCGCCCCGGCGAGGAG
ACACGAGCCGCCATCCGTGAGCTCTGTTCTCCATCAGAAGACCCATTTGC
GTCCCGCCTCAGGCATCATCCGCAGATCCAGGATGGGTCGGTCGGATGCC
TGGTGGACGAGATCAGTAATACTCACGAGCCGCCCGATTCGACGGAGCAG
CAGCAGCAGGAGGAGGAGGAGGAAGACGGGAAGGGGGAGTCGTTTCTTCG
CTCGGGACAGACACCGACCCAGACAGAGGTGGAACGGCAGGCGTTGCACA
AACTCCGACGGGCCGCGGCCAAGGAGAGACGCAAGCGAAAGCGACGATTA
GCAGCCATCGCAAAGGGGCAAGAAGAGGAGGGGTGGTTGGACTACGAGCC
AGGAGGGCTTATCCCTGAGGACCAAATCAATGCGAAGAGTAACAATTGA back to topCoding sequence (CDS) from alignment at ch4:5223825..5225973+ >KJC3_006280-T1 ID=KJC3_006280-T1|Name=KJC3_006280-T1|organism=Aspergillus niger KJC3|type=CDS|length=4182bp|location=Sequence derived from alignment at ch4:5223825..5225973+ (Aspergillus niger KJC3)
ATGCCGCGAACGACCCTGGTACTTGATGGACTGTGGTATTGTCTTTGTCC
GTCGTTTAATGCTGCAACCTTCAATCGAGTCACACCTTCCTTCACAGCAG
GGAGACGCATCCCTAAACATAATCGCATAACCGCTCTACGAAGCTCAATT
TCGGATCCTCCGCGAAGATGCCTCACCAACCTCACCCCACGACCGACCGA
TGCAGCCATTGAAATTGTCGAAGATGATACCCGCAGAAATACAGATTCCG
AATCAACCTCCGATCAACAACCCTTCGATCCTGACGATGCAGGCGCGCAG
GATGATGTACGTCCAGGGGACCTTTTATCGCCAATGGAGCGCTTGACCAA
GCCGCCACCGGGCGTACCCAAGTATTTCAAACACTTGCCTTCGCAACGTT
TAGAAAATAGACTACAGGAGCGAGTAGCTCGATATCCAAGGGTTCTGAGC
GCAACCCAAATCCTGCGCGTTCTAATCCGAGACCGCCATGTTCGCCCGGA
GATGCGACATTACCGGGGGTTAATTCTCGCCAATTCGGACCCTGAACGTG
GGTCGCCACAGGCTGTTCGCGCGTTGCTCAAGGAGATGGAGGAGAATGGG
ATTCCGGCTGATTCGGGGACACTTCATGCAGCATTGCAGGTCCTTGCTGT
TCATCCGGATTACCTCCTACGTCAGGAGATTGTGCGCACGCTTCGAGACC
GATGGCTTCCGCTGAGCCCGGCCGGATGGCACTTTGTAGTCGCTGGGTTG
ATTCGAGAGCATCAGTTCGAGCTGGCGTTGGATCATGTCGAGCAGATGGA
GAGAAAGGGCATGGTGGTCGAGAGTTGGCTGCATAGCCTACTTATCTATT
ACCTTTCCGATTTTGGAGAGTTCGACGAGGTGGTCCGGTTGATGCGTTCA
CGGACAAGCCAGGGTCTGGATATGAGCTCGGAGTTGTGGTTGCACGTGCT
GGAGGTGGCGAGCGCTGCTCTTCACTACGATACTACACGGTACATCTGGA
GACAGATGGTGGAGCTGAGATATCTTCACCCTGGTTATCCACTGTGCAGC
AATGTCCTCAGTGTGGCGGCGCGCGCTGGAGATACTGAGCTTGCGGCATC
GGTGATCCGCTTCCTCGTTGAGGTCAACATGCAGCCCCAACTGGATGACT
ACGAGAGAATGGTGGAAGCCCATGCTGTGTCGGGGTCCTTGTATTCTGCG
TTTGAGGTGCTGTGTAAGATGCATATGGCGGACATTGCGGTAGAAGACCG
CTCTACGCGTGCCATTCTTACACATCTGCTGCAGAGTAGAACAACCCCAC
GGGGCGCATGGACAATGCTCAAACAACTGAAGGCCACCAAACTGACAGTC
CCGCTTGGCTGCGCCAAAGTGGTGCTGGAGATGTGCGAGCAGGAAGCCCT
CGATAACCCGTCGGTGGTGGACGAGGGAATCGCGTTCTACAAGGAACTAT
ATGCGCTCTGTCCAGATAAGGCTGACGTTTCTGTCTACAACATTCTCCTC
GGTATGTGTCAACGGGCGCGCAATACCGAGGCGGGCATGTTCATCGCAAA
AGAGATGGCATCCCTTGGCGTGATTCCAGACCAAGGGACGTTTGAACATC
TCATCGTCATGTGCCTGGAAGCAGGCAATTTTGAGTCCGGGTACATGTAC
CTGCAAGATCTGCTGGGACGAGGGATCCGCCCCGGCGAGGAGACACGAGC
CGCCATCCGTGAGCTCTGTTCTCCATCAGAAGACCCATTTGCGTCCCGCC
TCAGGCATCATCCGCAGATCCAGGATGGGTCGGTCGGATGCCTGGTGGAC
GAGATCAGTAATACTCACGAGCCGCCCGATTCGACGGAGCAGCAGCAGCA
GGAGGAGGAGGAGGAAGACGGGAAGGGGGAGTCGTTTCTTCGCTCGGGAC
AGACACCGACCCAGACAGAGGTGGAACGGCAGGCGTTGCACAAACTCCGA
CGGGCCGCGGCCAAGGAGAGACGCAAGCGAAAGCGACGATTAGCAGCCAT
CGCAAAGGGGCAAGAAGAGGAGGGGTGGTTGGACTACGAGCCAGGAGGGC
TTATCCCTGAGGACCAAATCAATGCGAAGAGTAACAATTGAATGCCGCGA
ACGACCCTGGTACTTGATGGACTGTGGTATTGTCTTTGTCCGTCGTTTAA
TGCTGCAACCTTCAATCGAGTCACACCTTCCTTCACAGCAGGGAGACGCA
TCCCTAAACATAATCGCATAACCGCTCTACGAAGCTCAATTTCGGATCCT
CCGCGAAGATGCCTCACCAACCTCACCCCACGACCGACCGATGCAGCCAT
TGAAATTGTCGAAGATGATACCCGCAGAAATACAGATTCCGAATCAACCT
CCGATCAACAACCCTTCGATCCTGACGATGCAGGCGCGCAGGATGATGTA
CGTCCAGGGGACCTTTTATCGCCAATGGAGCGCTTGACCAAGCCGCCACC
GGGCGTACCCAAGTATTTCAAACACTTGCCTTCGCAACGTTTAGAAAATA
GACTACAGGAGCGAGTAGCTCGATATCCAAGGGTTCTGAGCGCAACCCAA
ATCCTGCGCGTTCTAATCCGAGACCGCCATGTTCGCCCGGAGATGCGACA
TTACCGGGGGTTAATTCTCGCCAATTCGGACCCTGAACGTGGGTCGCCAC
AGGCTGTTCGCGCGTTGCTCAAGGAGATGGAGGAGAATGGGATTCCGGCT
GATTCGGGGACACTTCATGCAGCATTGCAGGTCCTTGCTGTTCATCCGGA
TTACCTCCTACGTCAGGAGATTGTGCGCACGCTTCGAGACCGATGGCTTC
CGCTGAGCCCGGCCGGATGGCACTTTGTAGTCGCTGGGTTGATTCGAGAG
CATCAGTTCGAGCTGGCGTTGGATCATGTCGAGCAGATGGAGAGAAAGGG
CATGGTGGTCGAGAGTTGGCTGCATAGCCTACTTATCTATTACCTTTCCG
ATTTTGGAGAGTTCGACGAGGTGGTCCGGTTGATGCGTTCACGGACAAGC
CAGGGTCTGGATATGAGCTCGGAGTTGTGGTTGCACGTGCTGGAGGTGGC
GAGCGCTGCTCTTCACTACGATACTACACGGTACATCTGGAGACAGATGG
TGGAGCTGAGATATCTTCACCCTGGTTATCCACTGTGCAGCAATGTCCTC
AGTGTGGCGGCGCGCGCTGGAGATACTGAGCTTGCGGCATCGGTGATCCG
CTTCCTCGTTGAGGTCAACATGCAGCCCCAACTGGATGACTACGAGAGAA
TGGTGGAAGCCCATGCTGTGTCGGGGTCCTTGTATTCTGCGTTTGAGGTG
CTGTGTAAGATGCATATGGCGGACATTGCGGTAGAAGACCGCTCTACGCG
TGCCATTCTTACACATCTGCTGCAGAGTAGAACAACCCCACGGGGCGCAT
GGACAATGCTCAAACAACTGAAGGCCACCAAACTGACAGTCCCGCTTGGC
TGCGCCAAAGTGGTGCTGGAGATGTGCGAGCAGGAAGCCCTCGATAACCC
GTCGGTGGTGGACGAGGGAATCGCGTTCTACAAGGAACTATATGCGCTCT
GTCCAGATAAGGCTGACGTTTCTGTCTACAACATTCTCCTCGGTATGTGT
CAACGGGCGCGCAATACCGAGGCGGGCATGTTCATCGCAAAAGAGATGGC
ATCCCTTGGCGTGATTCCAGACCAAGGGACGTTTGAACATCTCATCGTCA
TGTGCCTGGAAGCAGGCAATTTTGAGTCCGGGTACATGTACCTGCAAGAT
CTGCTGGGACGAGGGATCCGCCCCGGCGAGGAGACACGAGCCGCCATCCG
TGAGCTCTGTTCTCCATCAGAAGACCCATTTGCGTCCCGCCTCAGGCATC
ATCCGCAGATCCAGGATGGGTCGGTCGGATGCCTGGTGGACGAGATCAGT
AATACTCACGAGCCGCCCGATTCGACGGAGCAGCAGCAGCAGGAGGAGGA
GGAGGAAGACGGGAAGGGGGAGTCGTTTCTTCGCTCGGGACAGACACCGA
CCCAGACAGAGGTGGAACGGCAGGCGTTGCACAAACTCCGACGGGCCGCG
GCCAAGGAGAGACGCAAGCGAAAGCGACGATTAGCAGCCATCGCAAAGGG
GCAAGAAGAGGAGGGGTGGTTGGACTACGAGCCAGGAGGGCTTATCCCTG
AGGACCAAATCAATGCGAAGAGTAACAATTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR002885 |
| DBxref | InterPro:IPR011990 |
| DBxref | InterPro:IPR033443 |
| DBxref | PFAM:PF17177 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5223825..5225973 + |
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