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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5255718..5257166- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006290-T1 ID=KJC3_006290-T1|Name=KJC3_006290-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1449bp|location=Sequence derived from alignment at ch4:5255718..5257166- (Aspergillus niger KJC3)
CTCTATGGTTGGATGAGGACTTTATATTCTTCTTTACATTTCCTCTCTCG
TTCTCCAGTTCGTCTTCATCTTCGTCCTCTTCTCGTCTTTTTCTAATTTT
ATGCATACAAGCATACACACAAACCCTACGTCAACCTTAACAGCAACCAT
CCAATTCTCACTACAACAACCATACACAATATGGAGCCTCACAATCATAC
AATGGGACATACAATGGAACCTCACACTACAACTACATTAGACCAAATTA
TGAACAACAACATGAACAACAACATGAACAACAACATGAACAACAACATG
AACAACAACATGAACAACAACATGAACAACCAATCCCAACCCCAACCCCA
AATCCCCATGCCCCCTCCACCTCAACCTCAACCCGAACCCGCCCCTCTCA
TCGAGATCCTCATCTGCATCAACGCCCACGGCACCCTAATCTGCATCCAA
TCCAACAACGCCCAACCAACAAGCACCGCAATCCCCATCGAAACCATCAT
CGCCAATCCCACCTCCTACATCTTCGCCTTCCGCGACCCCATCGCCCTGC
ACTACGCCTTCTCCAACCAAGCCACCTACTCCCTCATCACCTGCCACGCG
CACTACATCCGGCTGTACCTCCTTCACGACCTGCAAATCGGCTACCGGCC
AAGCTCTCCCACCCCCATGCCTTTGTCACCCCTCAACATCGACAATCTCT
TCTTCTACGACAGTGCCGCCGACCCCAACACGAAGTACATCACCCCGCCC
AGAATTCTCTGTATGCCCCTCGTCAGACAGCCCCAAAGAATGGACAATAA
CAGGGTCTGCACCATCTCGTGGCCGGGTTTTGATGCACTCATGAACAATT
GGCGGTATGCGTGTAGGGCGATTCCTTTGGGCCATGATATCTGGTATTTG
GTTTTTAATCTTGCGTCGAGGGGGGCGAGGGTGCCGCAGGGGGTGAGGAG
GTCGTTGCAGATGCTGAGCACGGCGGTTTGTTTGAAGGAGAGGGTGAAGG
GGAGGTTTCGGTGTGTGGTGGAGCGGTGTTCCAGGGGTGTGGTGGAGAGG
TTTGATGAGTTTTTGGTCGCTAATGTGGCGGTTATGGGGTGGTCGGTTGT
CGGGGATGATGATGAGGTTAGGGTTGAGGGGTGGGGTGATGGGGGTGGTG
GTGAGGGGACTGTTGATGGTGGTGGTGGTGGTGCCGTTGCTGCTGAATGT
GTGGTGATTGATTGATCGATATGTTTCTGGGGGTTGATACTGACGATCCG
ATGTTGGGACTCAAGGATGAAGGTGGTTATGGTGGATGCAATGGTGCAAT
GGGAAATATGTGGTTTTGAATTATTTGACGGAGGTGTATCTATTGAGATT
CGAGAGGATTCGGTTGTCGGTCCAGGTTGAAGGACTACAATTGGTGATTG
TGGTTGAGGTTCTATGCAAACTGTTGTTGATAGTTTCGGTGGACTTGGG back to topCoding sequence (CDS) from alignment at ch4:5255718..5257166- >KJC3_006290-T1 ID=KJC3_006290-T1|Name=KJC3_006290-T1|organism=Aspergillus niger KJC3|type=CDS|length=2298bp|location=Sequence derived from alignment at ch4:5255718..5257166- (Aspergillus niger KJC3)
CATACACACAAACCCTACGTCAACCTTAACAGCAACCATCCAATTCTCAC
TACAACAACCATACACAATATGGAGCCTCACAATCATACAATGGGACATA
CAATGGAACCTCACACTACAACTACATTAGACCAAATTATGAACAACAAC
ATGAACAACAACATGAACAACAACATGAACAACAACATGAACAACAACAT
GAACAACAACATGAACAACCAATCCCAACCCCAACCCCAAATCCCCATGC
CCCCTCCACCTCAACCTCAACCCGAACCCGCCCCTCTCATCGAGATCCTC
ATCTGCATCAACGCCCACGGCACCCTAATCTGCATCCAATCCAACAACGC
CCAACCAACAAGCACCGCAATCCCCATCGAAACCATCATCGCCAATCCCA
CCTCCTACATCTTCGCCTTCCGCGACCCCATCGCCCTGCACTACGCCTTC
TCCAACCAAGCCACCTACTCCCTCATCACCTGCCACGCGCACTACATCCG
GCTGTACCTCCTTCACGACCTGCAAATCGGCTACCGGCCAAGCTCTCCCA
CCCCCATGCCTTTGTCACCCCTCAACATCGACAATCTCTTCTTCTACGAC
AGTGCCGCCGACCCCAACACGAAGTACATCACCCCGCCCAGAATTCTCTG
TATGCCCCTCGTCAGACAGCCCCAAAGAATGGACAATAACAGGGTCTGCA
CCATCTCGTGGCCGGGTTTTGATGCACTCATGAACAATTGGCGGTATGCG
TGTAGGGCGATTCCTTTGGGCCATGATATCTGGTATTTGGTTTTTAATCT
TGCGTCGAGGGGGGCGAGGGTGCCGCAGGGGGTGAGGAGGTCGTTGCAGA
TGCTGAGCACGGCGGTTTGTTTGAAGGAGAGGGTGAAGGGGAGGTTTCGG
TGTGTGGTGGAGCGGTGTTCCAGGGGTGTGGTGGAGAGGTTTGATGAGTT
TTTGGTCGCTAATGTGGCGGTTATGGGGTGGTCGGTTGTCGGGGATGATG
ATGAGGTTAGGGTTGAGGGGTGGGGTGATGGGGGTGGTGGTGAGGGGACT
GTTGATGGTGGTGGTGGTGGTGCCGTTGCTGCTGAATGTGTGGTGATTGA
TTGAATGAGGACTTTATATTCTTCTTTACATTTCCTCTCTCGTTCTCCAC
ATACACACAAACCCTACGTCAACCTTAACAGCAACCATCCAATTCTCACT
ACAACAACCATACACAATATGGAGCCTCACAATCATACAATGGGACATAC
AATGGAACCTCACACTACAACTACATTAGACCAAATTATGAACAACAACA
TGAACAACAACATGAACAACAACATGAACAACAACATGAACAACAACATG
AACAACAACATGAACAACCAATCCCAACCCCAACCCCAAATCCCCATGCC
CCCTCCACCTCAACCTCAACCCGAACCCGCCCCTCTCATCGAGATCCTCA
TCTGCATCAACGCCCACGGCACCCTAATCTGCATCCAATCCAACAACGCC
CAACCAACAAGCACCGCAATCCCCATCGAAACCATCATCGCCAATCCCAC
CTCCTACATCTTCGCCTTCCGCGACCCCATCGCCCTGCACTACGCCTTCT
CCAACCAAGCCACCTACTCCCTCATCACCTGCCACGCGCACTACATCCGG
CTGTACCTCCTTCACGACCTGCAAATCGGCTACCGGCCAAGCTCTCCCAC
CCCCATGCCTTTGTCACCCCTCAACATCGACAATCTCTTCTTCTACGACA
GTGCCGCCGACCCCAACACGAAGTACATCACCCCGCCCAGAATTCTCTGT
ATGCCCCTCGTCAGACAGCCCCAAAGAATGGACAATAACAGGGTCTGCAC
CATCTCGTGGCCGGGTTTTGATGCACTCATGAACAATTGGCGGTATGCGT
GTAGGGCGATTCCTTTGGGCCATGATATCTGGTATTTGGTTTTTAATCTT
GCGTCGAGGGGGGCGAGGGTGCCGCAGGGGGTGAGGAGGTCGTTGCAGAT
GCTGAGCACGGCGGTTTGTTTGAAGGAGAGGGTGAAGGGGAGGTTTCGGT
GTGTGGTGGAGCGGTGTTCCAGGGGTGTGGTGGAGAGGTTTGATGAGTTT
TTGGTCGCTAATGTGGCGGTTATGGGGTGGTCGGTTGTCGGGGATGATGA
TGAGGTTAGGGTTGAGGGGTGGGGTGATGGGGGTGGTGGTGAGGGGACTG
TTGATGGTGGTGGTGGTGGTGCCGTTGCTGCTGAATGTGTGGTGATTGAT
TGAATGAGGACTTTATATTCTTCTTTACATTTCCTCTCTCGTTCTCCA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006290-T1.utr3p1 | KJC3_006290-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006290-T1.utr5p1 | KJC3_006290-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5255718..5257166 - |
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