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KJC3_006291-T1, KJC3_006291-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006291-T1
Unique NameKJC3_006291-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5257533..5258671-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006291-T1 ID=KJC3_006291-T1|Name=KJC3_006291-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1139bp|location=Sequence derived from alignment at ch4:5257533..5258671- (Aspergillus niger KJC3)
CAAGGAGTCGTCCAACAGCTATCGCCCCTCGACCTCTTCACTGGCTGCTT
GTCTGTCCCTGTTCCACTCCATCCTTCTAGAAGCCATCCAATTAATCCCT
CTGTTGTCCATTTAAGCACCAATCAGATGACCGCCGCAAGTCTGCGCCGC
TGGCCGCTCAGCCGCACTGGCCATTGCGTCATTGATCCCATCGTGCCTTG
GGCTTCAATTTCCTCCACAACATCTTCTGCTCGCCCCTCTTCATTCCAGC
TCCAACAACCGCTTCAACTTACTCGGTCATATCACCAGCACCGCTGCCAC
CAGTATTCATTTCAATCTTGTCTCCAACGCAGTCCCTACATTATCTTCAC
AACCGCAAGACCAGCACCCAACACCACATTCATCACCCCTCCTCCCAACC
GCACCATGTCTTCCGACAACGACTACATGTCCTTCCTGAACAAGGCCAAC
GCCGACCTCAATGCCAGCCAATTTCAGCCCCAACGAGGCAACACTTCTTC
CACCCCACGCACTCAAACCATCCACACCAACGTCCGCGTCCCCGCGCCCC
TCACCTCCGTCGACGCCTTCTACGTCTCCGAAACAGATGAGCCATTTGAA
CCAGTTGCTTTGAAATGGCCTGATGCAGAGCGTGGAATTTGGCCTGATGC
TGGTGAGTCTGCCTGTTAGACTATATACATATCTATTGGATGTTGTCTAC
TGGGACAGAAAGCTAATGTGGAATGGGATAACAGCTGCTCTCTCCAACCT
AGTTTCTCCAGATGCGGACCTCTCCAACTCCATCGAGACCTTGACATTTT
CGACGTTCGACCCGAGAAATCAGTATGCCGGGGTGGTGAGAGCCGTCAGG
GCTGCCGTTGGGGATGAGGAGGGCGCGGCTGTCAAGGTCTACCGGGTTGA
GGTGGCGAGGTCGAGGGTGGAGTACTTTGTTTTGGCGCTGGATGGGACAG
AGGGCTTGGTTGTTGGATTGAGGGCTAAGGCTATTGAGACCTAGGTTGGT
TGTTCATGGGTGATGTTGGAAGTAGGATAATGAGAAGATGACTTATGTGA
GAGCGCTGTGATATCAGGCCAGTTTTATGCTTAGAAATGACGTTACTCAA
GTTGATATAAGCAATACTAATATGACTATCTGGGAACGG
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Coding sequence (CDS) from alignment at ch4:5257533..5258671-

>KJC3_006291-T1 ID=KJC3_006291-T1|Name=KJC3_006291-T1|organism=Aspergillus niger KJC3|type=CDS|length=1572bp|location=Sequence derived from alignment at ch4:5257533..5258671- (Aspergillus niger KJC3)
CTGCTCTCTCCAACCTAGTTTCTCCAGATGCGGACCTCTCCAACTCCATC
GAGACCTTGACATTTTCGACGTTCGACCCGAGAAATCAGTATGCCGGGGT
GGTGAGAGCCGTCAGGGCTGCCGTTGGGGATGAGGAGGGCGCGGCTGTCA
AGGTCTACCGGGTTGAGGTGGCGAGGTCGAGGGTGGAGTACTTTGTTTTG
GCGCTGGATGGGACAGAGGGCTTGGTTGTTGGATTGAGGGCTAAGGCTAT
TGAGACCTAGATGACCGCCGCAAGTCTGCGCCGCTGGCCGCTCAGCCGCA
CTGGCCATTGCGTCATTGATCCCATCGTGCCTTGGGCTTCAATTTCCTCC
ACAACATCTTCTGCTCGCCCCTCTTCATTCCAGCTCCAACAACCGCTTCA
ACTTACTCGGTCATATCACCAGCACCGCTGCCACCAGTATTCATTTCAAT
CTTGTCTCCAACGCAGTCCCTACATTATCTTCACAACCGCAAGACCAGCA
CCCAACACCACATTCATCACCCCTCCTCCCAACCGCACCATGTCTTCCGA
CAACGACTACATGTCCTTCCTGAACAAGGCCAACGCCGACCTCAATGCCA
GCCAATTTCAGCCCCAACGAGGCAACACTTCTTCCACCCCACGCACTCAA
ACCATCCACACCAACGTCCGCGTCCCCGCGCCCCTCACCTCCGTCGACGC
CTTCTACGTCTCCGAAACAGATGAGCCATTTGAACCAGTTGCTTTGAAAT
GGCCTGATGCAGAGCGTGGAATTTGGCCTGATGCTGCTGCTCTCTCCAAC
CTAGTTTCTCCAGATGCGGACCTCTCCAACTCCATCGAGACCTTGACATT
TTCGACGTTCGACCCGAGAAATCAGTATGCCGGGGTGGTGAGAGCCGTCA
GGGCTGCCGTTGGGGATGAGGAGGGCGCGGCTGTCAAGGTCTACCGGGTT
GAGGTGGCGAGGTCGAGGGTGGAGTACTTTGTTTTGGCGCTGGATGGGAC
AGAGGGCTTGGTTGTTGGATTGAGGGCTAAGGCTATTGAGACCTAGATGA
CCGCCGCAAGTCTGCGCCGCTGGCCGCTCAGCCGCACTGGCCATTGCGTC
ATTGATCCCATCGTGCCTTGGGCTTCAATTTCCTCCACAACATCTTCTGC
TCGCCCCTCTTCATTCCAGCTCCAACAACCGCTTCAACTTACTCGGTCAT
ATCACCAGCACCGCTGCCACCAGTATTCATTTCAATCTTGTCTCCAACGC
AGTCCCTACATTATCTTCACAACCGCAAGACCAGCACCCAACACCACATT
CATCACCCCTCCTCCCAACCGCACCATGTCTTCCGACAACGACTACATGT
CCTTCCTGAACAAGGCCAACGCCGACCTCAATGCCAGCCAATTTCAGCCC
CAACGAGGCAACACTTCTTCCACCCCACGCACTCAAACCATCCACACCAA
CGTCCGCGTCCCCGCGCCCCTCACCTCCGTCGACGCCTTCTACGTCTCCG
AAACAGATGAGCCATTTGAACCAGTTGCTTTGAAATGGCCTGATGCAGAG
CGTGGAATTTGGCCTGATGCTG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006291KJC3_006291Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006291-T1KJC3_006291-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006291-T1.cdsKJC3_006291-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006291-T1.utr3p1KJC3_006291-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006291-T1.exon2KJC3_006291-T1.exon2Aspergillus niger KJC3exon
KJC3_006291-T1.exon1KJC3_006291-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006291-T1.utr5p1KJC3_006291-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5257533..5258671 -
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