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KJC3_006292-T1, KJC3_006292-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006292-T1
Unique NameKJC3_006292-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5258826..5260562-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006292-T1 ID=KJC3_006292-T1|Name=KJC3_006292-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1737bp|location=Sequence derived from alignment at ch4:5258826..5260562- (Aspergillus niger KJC3)
CTCACCACTTCGACGACTAACGACAACAGGGTCAAGATGTAAGTCGTCCT
GCTGCGATATATGATAATTTGTTGAGCTCAAGGAATAATGTCGCTAATTC
AATTTATTTTACAGGAGTCACCGGAAGTACGAAGCGCCTCGGCACGGTTC
GTCAACCTACTTTGCGACCTCTCAAACGATATTGGAATCTCGAGGTCTTG
TGTGTGGATGGTATACTGACTTGGATTTCGACAGGCTCTCTTGCCTACCT
CCCCCGCAAGCGCGCCGCCCGCCACCGTGGAAAGGTCAAGAGGTTAGTTT
TTGGCCCGCGAAGACGAGACGCAAAAATCGGAGTTTGATGGACACATACT
GAACTGTTCGGCAGCTTCCCCAAGGATGACCCCAAGAAGCCCGTCCACCT
GACGGCCACCATGGGCTACAAGGCCGGTATGACCACCGTCGTCCGTGACC
TTGACCGTCCCGGTGCCAAGATGCACAAGAAGGAAGTTGTCGAGGCTGCT
ACCGTCATCGAGACTCCTCCCGTACGTGGACCCCTTGGTAGGAAGAAGGC
AGAAAGAAAATCTTTTTCTGGCCTGGCGATTGTGGATCTGTTCAATGACT
GACATATCTTGATTTATAGCTTGTCGCTGTCGGTGTTGTCGGTTACATTG
AGACTCCCCGTGGTCTCCGCTCTCTCACCACCGTCTGGGCTGAGCACCTG
AGCGACGAGGTCAAGCGCCGCTTCTACAAGAACTGGTACAAGAGCAAGAA
GAAGGCTTTCACCAAGTACGCCAAGAAGCACGCCGAGGAGAACGGTGCTT
CCATCACCCGCGAGCTCGAGCGCATCAAGAAGTACTGCACTGTCGTCCGT
GTCCTCGCCCACACCCAAGTCCGCAAGACTCCCCTCAAGCAGAAGAAGGC
CCACTTGATGGAGATCCAGGTCAACGGTGGCTCCGTTGCCGACAAGGTTG
ACTTCGCCCGCAACCTGTTCGAGAAGCCCATCGAGATCGACTCCATCTTC
GAGAAGGACGAGATGATCGATGTCATCGCCGTCACCAAGGGTCACGGTTT
CCAGGGTGTCACCAGCCGTTGGGGCACCAAGAAGCTTCCCCGTAAGACTC
ACAAGGGTCTGCGTAAGGTCGCTTGTATCGGTGCCTGGCACCCTAACCAC
GTCCAGTGGACTGTTGCCCGTGCTGGTCAGATGGGTTACCACCACCGTAC
CTCTTGCAACCACAAGGTCTTCCGTGTTGGCAAGGGCTCCGACGAGGGTA
ACGCCTCCACTGACTTCGATATCTCCAAGAAGCAGATCACCCCGTAAGTA
GCCTCTTCTCTAAAATAAACTGAAAGACCTTGGACGCTAACAATCTTCTG
CAGCATGGGTGGCTTCGTTCACTACGGTGAGGTCAAGAACGACTTCGTTC
TCCTTAAGGGTTCCGTCCCCGGTGTTAAGAAGCGTGTCATGACCCTCCGC
AAGACCCTGTACCCCCAGACCAGCCGCAGGGCCACCGAGAAGATCGAGCT
CAAGTGGATCGATACCTCCTCCAAGTTCGGTCACGGTGCTTTCCAGACCC
CCGAGGAGAAGCGTGCCTTCATGGGTACCCTCAAGAAGGACCTGGAGACT
TCCGCTTAAGGTGTTTATGGAAATGGTTCGGTGTAGTGCAAATTATATTA
CGTTTCAATAAAAGCGAAGAATACCTTTCACTTTTTCCTATGGTGTCACG
GTAGTTTACGTAGCAATAATAATGTGTTGGATTTTAT
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Coding sequence (CDS) from alignment at ch4:5258826..5260562-

>KJC3_006292-T1 ID=KJC3_006292-T1|Name=KJC3_006292-T1|organism=Aspergillus niger KJC3|type=CDS|length=7074bp|location=Sequence derived from alignment at ch4:5258826..5260562- (Aspergillus niger KJC3)
CATGGGTGGCTTCGTTCACTACGGTGAGGTCAAGAACGACTTCGTTCTCC
TTAAGGGTTCCGTCCCCGGTGTTAAGAAGCGTGTCATGACCCTCCGCAAG
ACCCTGTACCCCCAGACCAGCCGCAGGGCCACCGAGAAGATCGAGCTCAA
GTGGATCGATACCTCCTCCAAGTTCGGTCACGGTGCTTTCCAGACCCCCG
AGGAGAAGCGTGCCTTCATGGGTACCCTCAAGAAGGACCTGGAGACTTCC
GCTTAACTTGTCGCTGTCGGTGTTGTCGGTTACATTGAGACTCCCCGTGG
TCTCCGCTCTCTCACCACCGTCTGGGCTGAGCACCTGAGCGACGAGGTCA
AGCGCCGCTTCTACAAGAACTGGTACAAGAGCAAGAAGAAGGCTTTCACC
AAGTACGCCAAGAAGCACGCCGAGGAGAACGGTGCTTCCATCACCCGCGA
GCTCGAGCGCATCAAGAAGTACTGCACTGTCGTCCGTGTCCTCGCCCACA
CCCAAGTCCGCAAGACTCCCCTCAAGCAGAAGAAGGCCCACTTGATGGAG
ATCCAGGTCAACGGTGGCTCCGTTGCCGACAAGGTTGACTTCGCCCGCAA
CCTGTTCGAGAAGCCCATCGAGATCGACTCCATCTTCGAGAAGGACGAGA
TGATCGATGTCATCGCCGTCACCAAGGGTCACGGTTTCCAGGGTGTCACC
AGCCGTTGGGGCACCAAGAAGCTTCCCCGTAAGACTCACAAGGGTCTGCG
TAAGGTCGCTTGTATCGGTGCCTGGCACCCTAACCACGTCCAGTGGACTG
TTGCCCGTGCTGGTCAGATGGGTTACCACCACCGTACCTCTTGCAACCAC
AAGGTCTTCCGTGTTGGCAAGGGCTCCGACGAGGGTAACGCCTCCACTGA
CTTCGATATCTCCAAGAAGCAGATCACCCCCTTCCCCAAGGATGACCCCA
AGAAGCCCGTCCACCTGACGGCCACCATGGGCTACAAGGCCGGTATGACC
ACCGTCGTCCGTGACCTTGACCGTCCCGGTGCCAAGATGCACAAGAAGGA
AGTTGTCGAGGCTGCTACCGTCATCGAGACTCCTCCCGCTCTCTTGCCTA
CCTCCCCCGCAAGCGCGCCGCCCGCCACCGTGGAAAGGTCAAGAGGAGTC
ACCGGAAGTACGAAGCGCCTCGGCACGATCATGGGTGGCTTCGTTCACTA
CGGTGAGGTCAAGAACGACTTCGTTCTCCTTAAGGGTTCCGTCCCCGGTG
TTAAGAAGCGTGTCATGACCCTCCGCAAGACCCTGTACCCCCAGACCAGC
CGCAGGGCCACCGAGAAGATCGAGCTCAAGTGGATCGATACCTCCTCCAA
GTTCGGTCACGGTGCTTTCCAGACCCCCGAGGAGAAGCGTGCCTTCATGG
GTACCCTCAAGAAGGACCTGGAGACTTCCGCTTAACTTGTCGCTGTCGGT
GTTGTCGGTTACATTGAGACTCCCCGTGGTCTCCGCTCTCTCACCACCGT
CTGGGCTGAGCACCTGAGCGACGAGGTCAAGCGCCGCTTCTACAAGAACT
GGTACAAGAGCAAGAAGAAGGCTTTCACCAAGTACGCCAAGAAGCACGCC
GAGGAGAACGGTGCTTCCATCACCCGCGAGCTCGAGCGCATCAAGAAGTA
CTGCACTGTCGTCCGTGTCCTCGCCCACACCCAAGTCCGCAAGACTCCCC
TCAAGCAGAAGAAGGCCCACTTGATGGAGATCCAGGTCAACGGTGGCTCC
GTTGCCGACAAGGTTGACTTCGCCCGCAACCTGTTCGAGAAGCCCATCGA
GATCGACTCCATCTTCGAGAAGGACGAGATGATCGATGTCATCGCCGTCA
CCAAGGGTCACGGTTTCCAGGGTGTCACCAGCCGTTGGGGCACCAAGAAG
CTTCCCCGTAAGACTCACAAGGGTCTGCGTAAGGTCGCTTGTATCGGTGC
CTGGCACCCTAACCACGTCCAGTGGACTGTTGCCCGTGCTGGTCAGATGG
GTTACCACCACCGTACCTCTTGCAACCACAAGGTCTTCCGTGTTGGCAAG
GGCTCCGACGAGGGTAACGCCTCCACTGACTTCGATATCTCCAAGAAGCA
GATCACCCCCTTCCCCAAGGATGACCCCAAGAAGCCCGTCCACCTGACGG
CCACCATGGGCTACAAGGCCGGTATGACCACCGTCGTCCGTGACCTTGAC
CGTCCCGGTGCCAAGATGCACAAGAAGGAAGTTGTCGAGGCTGCTACCGT
CATCGAGACTCCTCCCGCTCTCTTGCCTACCTCCCCCGCAAGCGCGCCGC
CCGCCACCGTGGAAAGGTCAAGAGGAGTCACCGGAAGTACGAAGCGCCTC
GGCACGATCATGGGTGGCTTCGTTCACTACGGTGAGGTCAAGAACGACTT
CGTTCTCCTTAAGGGTTCCGTCCCCGGTGTTAAGAAGCGTGTCATGACCC
TCCGCAAGACCCTGTACCCCCAGACCAGCCGCAGGGCCACCGAGAAGATC
GAGCTCAAGTGGATCGATACCTCCTCCAAGTTCGGTCACGGTGCTTTCCA
GACCCCCGAGGAGAAGCGTGCCTTCATGGGTACCCTCAAGAAGGACCTGG
AGACTTCCGCTTAACTTGTCGCTGTCGGTGTTGTCGGTTACATTGAGACT
CCCCGTGGTCTCCGCTCTCTCACCACCGTCTGGGCTGAGCACCTGAGCGA
CGAGGTCAAGCGCCGCTTCTACAAGAACTGGTACAAGAGCAAGAAGAAGG
CTTTCACCAAGTACGCCAAGAAGCACGCCGAGGAGAACGGTGCTTCCATC
ACCCGCGAGCTCGAGCGCATCAAGAAGTACTGCACTGTCGTCCGTGTCCT
CGCCCACACCCAAGTCCGCAAGACTCCCCTCAAGCAGAAGAAGGCCCACT
TGATGGAGATCCAGGTCAACGGTGGCTCCGTTGCCGACAAGGTTGACTTC
GCCCGCAACCTGTTCGAGAAGCCCATCGAGATCGACTCCATCTTCGAGAA
GGACGAGATGATCGATGTCATCGCCGTCACCAAGGGTCACGGTTTCCAGG
GTGTCACCAGCCGTTGGGGCACCAAGAAGCTTCCCCGTAAGACTCACAAG
GGTCTGCGTAAGGTCGCTTGTATCGGTGCCTGGCACCCTAACCACGTCCA
GTGGACTGTTGCCCGTGCTGGTCAGATGGGTTACCACCACCGTACCTCTT
GCAACCACAAGGTCTTCCGTGTTGGCAAGGGCTCCGACGAGGGTAACGCC
TCCACTGACTTCGATATCTCCAAGAAGCAGATCACCCCCTTCCCCAAGGA
TGACCCCAAGAAGCCCGTCCACCTGACGGCCACCATGGGCTACAAGGCCG
GTATGACCACCGTCGTCCGTGACCTTGACCGTCCCGGTGCCAAGATGCAC
AAGAAGGAAGTTGTCGAGGCTGCTACCGTCATCGAGACTCCTCCCGCTCT
CTTGCCTACCTCCCCCGCAAGCGCGCCGCCCGCCACCGTGGAAAGGTCAA
GAGGAGTCACCGGAAGTACGAAGCGCCTCGGCACGATCATGGGTGGCTTC
GTTCACTACGGTGAGGTCAAGAACGACTTCGTTCTCCTTAAGGGTTCCGT
CCCCGGTGTTAAGAAGCGTGTCATGACCCTCCGCAAGACCCTGTACCCCC
AGACCAGCCGCAGGGCCACCGAGAAGATCGAGCTCAAGTGGATCGATACC
TCCTCCAAGTTCGGTCACGGTGCTTTCCAGACCCCCGAGGAGAAGCGTGC
CTTCATGGGTACCCTCAAGAAGGACCTGGAGACTTCCGCTTAACTTGTCG
CTGTCGGTGTTGTCGGTTACATTGAGACTCCCCGTGGTCTCCGCTCTCTC
ACCACCGTCTGGGCTGAGCACCTGAGCGACGAGGTCAAGCGCCGCTTCTA
CAAGAACTGGTACAAGAGCAAGAAGAAGGCTTTCACCAAGTACGCCAAGA
AGCACGCCGAGGAGAACGGTGCTTCCATCACCCGCGAGCTCGAGCGCATC
AAGAAGTACTGCACTGTCGTCCGTGTCCTCGCCCACACCCAAGTCCGCAA
GACTCCCCTCAAGCAGAAGAAGGCCCACTTGATGGAGATCCAGGTCAACG
GTGGCTCCGTTGCCGACAAGGTTGACTTCGCCCGCAACCTGTTCGAGAAG
CCCATCGAGATCGACTCCATCTTCGAGAAGGACGAGATGATCGATGTCAT
CGCCGTCACCAAGGGTCACGGTTTCCAGGGTGTCACCAGCCGTTGGGGCA
CCAAGAAGCTTCCCCGTAAGACTCACAAGGGTCTGCGTAAGGTCGCTTGT
ATCGGTGCCTGGCACCCTAACCACGTCCAGTGGACTGTTGCCCGTGCTGG
TCAGATGGGTTACCACCACCGTACCTCTTGCAACCACAAGGTCTTCCGTG
TTGGCAAGGGCTCCGACGAGGGTAACGCCTCCACTGACTTCGATATCTCC
AAGAAGCAGATCACCCCCTTCCCCAAGGATGACCCCAAGAAGCCCGTCCA
CCTGACGGCCACCATGGGCTACAAGGCCGGTATGACCACCGTCGTCCGTG
ACCTTGACCGTCCCGGTGCCAAGATGCACAAGAAGGAAGTTGTCGAGGCT
GCTACCGTCATCGAGACTCCTCCCGCTCTCTTGCCTACCTCCCCCGCAAG
CGCGCCGCCCGCCACCGTGGAAAGGTCAAGAGGAGTCACCGGAAGTACGA
AGCGCCTCGGCACGATCATGGGTGGCTTCGTTCACTACGGTGAGGTCAAG
AACGACTTCGTTCTCCTTAAGGGTTCCGTCCCCGGTGTTAAGAAGCGTGT
CATGACCCTCCGCAAGACCCTGTACCCCCAGACCAGCCGCAGGGCCACCG
AGAAGATCGAGCTCAAGTGGATCGATACCTCCTCCAAGTTCGGTCACGGT
GCTTTCCAGACCCCCGAGGAGAAGCGTGCCTTCATGGGTACCCTCAAGAA
GGACCTGGAGACTTCCGCTTAACTTGTCGCTGTCGGTGTTGTCGGTTACA
TTGAGACTCCCCGTGGTCTCCGCTCTCTCACCACCGTCTGGGCTGAGCAC
CTGAGCGACGAGGTCAAGCGCCGCTTCTACAAGAACTGGTACAAGAGCAA
GAAGAAGGCTTTCACCAAGTACGCCAAGAAGCACGCCGAGGAGAACGGTG
CTTCCATCACCCGCGAGCTCGAGCGCATCAAGAAGTACTGCACTGTCGTC
CGTGTCCTCGCCCACACCCAAGTCCGCAAGACTCCCCTCAAGCAGAAGAA
GGCCCACTTGATGGAGATCCAGGTCAACGGTGGCTCCGTTGCCGACAAGG
TTGACTTCGCCCGCAACCTGTTCGAGAAGCCCATCGAGATCGACTCCATC
TTCGAGAAGGACGAGATGATCGATGTCATCGCCGTCACCAAGGGTCACGG
TTTCCAGGGTGTCACCAGCCGTTGGGGCACCAAGAAGCTTCCCCGTAAGA
CTCACAAGGGTCTGCGTAAGGTCGCTTGTATCGGTGCCTGGCACCCTAAC
CACGTCCAGTGGACTGTTGCCCGTGCTGGTCAGATGGGTTACCACCACCG
TACCTCTTGCAACCACAAGGTCTTCCGTGTTGGCAAGGGCTCCGACGAGG
GTAACGCCTCCACTGACTTCGATATCTCCAAGAAGCAGATCACCCCCTTC
CCCAAGGATGACCCCAAGAAGCCCGTCCACCTGACGGCCACCATGGGCTA
CAAGGCCGGTATGACCACCGTCGTCCGTGACCTTGACCGTCCCGGTGCCA
AGATGCACAAGAAGGAAGTTGTCGAGGCTGCTACCGTCATCGAGACTCCT
CCCGCTCTCTTGCCTACCTCCCCCGCAAGCGCGCCGCCCGCCACCGTGGA
AAGGTCAAGAGGAGTCACCGGAAGTACGAAGCGCCTCGGCACGATCATGG
GTGGCTTCGTTCACTACGGTGAGGTCAAGAACGACTTCGTTCTCCTTAAG
GGTTCCGTCCCCGGTGTTAAGAAGCGTGTCATGACCCTCCGCAAGACCCT
GTACCCCCAGACCAGCCGCAGGGCCACCGAGAAGATCGAGCTCAAGTGGA
TCGATACCTCCTCCAAGTTCGGTCACGGTGCTTTCCAGACCCCCGAGGAG
AAGCGTGCCTTCATGGGTACCCTCAAGAAGGACCTGGAGACTTCCGCTTA
ACTTGTCGCTGTCGGTGTTGTCGGTTACATTGAGACTCCCCGTGGTCTCC
GCTCTCTCACCACCGTCTGGGCTGAGCACCTGAGCGACGAGGTCAAGCGC
CGCTTCTACAAGAACTGGTACAAGAGCAAGAAGAAGGCTTTCACCAAGTA
CGCCAAGAAGCACGCCGAGGAGAACGGTGCTTCCATCACCCGCGAGCTCG
AGCGCATCAAGAAGTACTGCACTGTCGTCCGTGTCCTCGCCCACACCCAA
GTCCGCAAGACTCCCCTCAAGCAGAAGAAGGCCCACTTGATGGAGATCCA
GGTCAACGGTGGCTCCGTTGCCGACAAGGTTGACTTCGCCCGCAACCTGT
TCGAGAAGCCCATCGAGATCGACTCCATCTTCGAGAAGGACGAGATGATC
GATGTCATCGCCGTCACCAAGGGTCACGGTTTCCAGGGTGTCACCAGCCG
TTGGGGCACCAAGAAGCTTCCCCGTAAGACTCACAAGGGTCTGCGTAAGG
TCGCTTGTATCGGTGCCTGGCACCCTAACCACGTCCAGTGGACTGTTGCC
CGTGCTGGTCAGATGGGTTACCACCACCGTACCTCTTGCAACCACAAGGT
CTTCCGTGTTGGCAAGGGCTCCGACGAGGGTAACGCCTCCACTGACTTCG
ATATCTCCAAGAAGCAGATCACCCCCTTCCCCAAGGATGACCCCAAGAAG
CCCGTCCACCTGACGGCCACCATGGGCTACAAGGCCGGTATGACCACCGT
CGTCCGTGACCTTGACCGTCCCGGTGCCAAGATGCACAAGAAGGAAGTTG
TCGAGGCTGCTACCGTCATCGAGACTCCTCCCGCTCTCTTGCCTACCTCC
CCCGCAAGCGCGCCGCCCGCCACCGTGGAAAGGTCAAGAGGAGTCACCGG
AAGTACGAAGCGCCTCGGCACGAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL3KJC3_006292Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006292-T1KJC3_006292-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006292-T1.cdsKJC3_006292-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006292-T1.utr3p1KJC3_006292-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006292-T1.exon6KJC3_006292-T1.exon6Aspergillus niger KJC3exon
KJC3_006292-T1.exon5KJC3_006292-T1.exon5Aspergillus niger KJC3exon
KJC3_006292-T1.exon4KJC3_006292-T1.exon4Aspergillus niger KJC3exon
KJC3_006292-T1.exon3KJC3_006292-T1.exon3Aspergillus niger KJC3exon
KJC3_006292-T1.exon2KJC3_006292-T1.exon2Aspergillus niger KJC3exon
KJC3_006292-T1.exon1KJC3_006292-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006292-T1.utr5p1KJC3_006292-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR009000
DBxrefInterPro:IPR019926
DBxrefInterPro:IPR000597
DBxrefPFAM:PF00297
Product60S ribosomal protein L3
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5258826..5260562 -
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