You are here

Home

KJC3_006294-T1, KJC3_006294-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006294-T1
Unique NameKJC3_006294-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5275502..5276639+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006294-T1 ID=KJC3_006294-T1|Name=KJC3_006294-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1138bp|location=Sequence derived from alignment at ch4:5275502..5276639+ (Aspergillus niger KJC3)
ATGGAGCAGCCGGCAATGTCCCAGCCTGCTACCCACCGTCAAGATGATAG
TCACCTCGTGACAGCTTATTTTCCGAACCCAACACCCACTGTGCCTGCTG
CTGCCGCACATCCTCCCCCACACTTTCTGCCGGCGTCCTCCTCGTCGCCA
TCACCTCACCACTTTCATTCGGAGGTTGACTCCTCTCCATCGGAACTTCA
CTATCTCGACGACTCCCTGCACATCTCACATCCTGAATACCAGCAGCCTC
AGCGGCATTCTCGACGACAGCATAGCCTATCACATCAAACCCCGCAGACT
GGGGAACATCTATATCCGGAATTGGGGCAGGCTTCGGTGCCTCCAGAGGC
GTCGGTTGCCTCGCCTTATCACGAGAACGGCTCCGTATTATCGAGGGCTT
CAGGTGCAAGCGAAGTCGGGCGCAAAGAAGGGCGCGTTCGTGGGAGTTGG
ACCGATCATTCGTCATATATGTCGGGCGATAATCACCCCAATGGCGCATC
TCGCGTACATAAACGAGCGATTCATGACGACGACATAGCGCCGGAGGAAG
AGCCGGATGCGCTGTTGATGCTGGTGAGCTTCGTCTATTTCCTCCGAATG
TCTAGCTATTCGGGCCGTAGCTAACCGCACTGGATTTTAGTTTCGACTCT
CCCTTCCCGTTCCTGTATTCTCCTTCTGCGCATCGTTGTACACCATCTTC
GGCGTGCTCTTCGTCCTGCTTGTCTCACCGCTTCGCATTTGTTCCTGCAT
ACCATACTTTCGGGCGACGTCCTTCCGGGCACAGCTGTGTGGTCTGCTGA
TACCCCAGTTGCATATCCATGAACGACTGGTCTGCTTGCGACAATCTTCT
TCAAGATCCTCATCCACCCAGCCGATATATGATCCGGAGGGATCCTATGT
GGCCGAATCCATCGACTCGTATTCAATTGGAGGGCTGCTCACAGTCCTCC
TTCTCTCGCCGTTCCTATCCATCGCCATAACTCTCCTGGCTTGGATTGCA
GCATTTTTCTGGATCTTCGCCATGGTTCTAGGCAATCCAGATGGCACAGA
GCGCAAAGACGATGGCCGAGCAGCCGTTCTCGGAGTCTGCCGATGGTGGC
AGATATGGCTTGGCAAAGCCCGTAAGCCACTCGCTTAG
back to top

Coding sequence (CDS) from alignment at ch4:5275502..5276639+

>KJC3_006294-T1 ID=KJC3_006294-T1|Name=KJC3_006294-T1|organism=Aspergillus niger KJC3|type=CDS|length=2142bp|location=Sequence derived from alignment at ch4:5275502..5276639+ (Aspergillus niger KJC3)
ATGGAGCAGCCGGCAATGTCCCAGCCTGCTACCCACCGTCAAGATGATAG
TCACCTCGTGACAGCTTATTTTCCGAACCCAACACCCACTGTGCCTGCTG
CTGCCGCACATCCTCCCCCACACTTTCTGCCGGCGTCCTCCTCGTCGCCA
TCACCTCACCACTTTCATTCGGAGGTTGACTCCTCTCCATCGGAACTTCA
CTATCTCGACGACTCCCTGCACATCTCACATCCTGAATACCAGCAGCCTC
AGCGGCATTCTCGACGACAGCATAGCCTATCACATCAAACCCCGCAGACT
GGGGAACATCTATATCCGGAATTGGGGCAGGCTTCGGTGCCTCCAGAGGC
GTCGGTTGCCTCGCCTTATCACGAGAACGGCTCCGTATTATCGAGGGCTT
CAGGTGCAAGCGAAGTCGGGCGCAAAGAAGGGCGCGTTCGTGGGAGTTGG
ACCGATCATTCGTCATATATGTCGGGCGATAATCACCCCAATGGCGCATC
TCGCGTACATAAACGAGCGATTCATGACGACGACATAGCGCCGGAGGAAG
AGCCGGATGCGCTGTTGATGCTGTTTCGACTCTCCCTTCCCGTTCCTGTA
TTCTCCTTCTGCGCATCGTTGTACACCATCTTCGGCGTGCTCTTCGTCCT
GCTTGTCTCACCGCTTCGCATTTGTTCCTGCATACCATACTTTCGGGCGA
CGTCCTTCCGGGCACAGCTGTGTGGTCTGCTGATACCCCAGTTGCATATC
CATGAACGACTGGTCTGCTTGCGACAATCTTCTTCAAGATCCTCATCCAC
CCAGCCGATATATGATCCGGAGGGATCCTATGTGGCCGAATCCATCGACT
CGTATTCAATTGGAGGGCTGCTCACAGTCCTCCTTCTCTCGCCGTTCCTA
TCCATCGCCATAACTCTCCTGGCTTGGATTGCAGCATTTTTCTGGATCTT
CGCCATGGTTCTAGGCAATCCAGATGGCACAGAGCGCAAAGACGATGGCC
GAGCAGCCGTTCTCGGAGTCTGCCGATGGTGGCAGATATGGCTTGGCAAA
GCCCGTAAGCCACTCGCTTAGATGGAGCAGCCGGCAATGTCCCAGCCTGC
TACCCACCGTCAAGATGATAGTCACCTCGTGACAGCTTATTTTCCGAACC
CAACACCCACTGTGCCTGCTGCTGCCGCACATCCTCCCCCACACTTTCTG
CCGGCGTCCTCCTCGTCGCCATCACCTCACCACTTTCATTCGGAGGTTGA
CTCCTCTCCATCGGAACTTCACTATCTCGACGACTCCCTGCACATCTCAC
ATCCTGAATACCAGCAGCCTCAGCGGCATTCTCGACGACAGCATAGCCTA
TCACATCAAACCCCGCAGACTGGGGAACATCTATATCCGGAATTGGGGCA
GGCTTCGGTGCCTCCAGAGGCGTCGGTTGCCTCGCCTTATCACGAGAACG
GCTCCGTATTATCGAGGGCTTCAGGTGCAAGCGAAGTCGGGCGCAAAGAA
GGGCGCGTTCGTGGGAGTTGGACCGATCATTCGTCATATATGTCGGGCGA
TAATCACCCCAATGGCGCATCTCGCGTACATAAACGAGCGATTCATGACG
ACGACATAGCGCCGGAGGAAGAGCCGGATGCGCTGTTGATGCTGTTTCGA
CTCTCCCTTCCCGTTCCTGTATTCTCCTTCTGCGCATCGTTGTACACCAT
CTTCGGCGTGCTCTTCGTCCTGCTTGTCTCACCGCTTCGCATTTGTTCCT
GCATACCATACTTTCGGGCGACGTCCTTCCGGGCACAGCTGTGTGGTCTG
CTGATACCCCAGTTGCATATCCATGAACGACTGGTCTGCTTGCGACAATC
TTCTTCAAGATCCTCATCCACCCAGCCGATATATGATCCGGAGGGATCCT
ATGTGGCCGAATCCATCGACTCGTATTCAATTGGAGGGCTGCTCACAGTC
CTCCTTCTCTCGCCGTTCCTATCCATCGCCATAACTCTCCTGGCTTGGAT
TGCAGCATTTTTCTGGATCTTCGCCATGGTTCTAGGCAATCCAGATGGCA
CAGAGCGCAAAGACGATGGCCGAGCAGCCGTTCTCGGAGTCTGCCGATGG
TGGCAGATATGGCTTGGCAAAGCCCGTAAGCCACTCGCTTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006294KJC3_006294Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006294-T1.exon1KJC3_006294-T1.exon1Aspergillus niger KJC3exon
KJC3_006294-T1.exon2KJC3_006294-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006294-T1.cdsKJC3_006294-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006294-T1KJC3_006294-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5275502..5276639 +
Powered by Drupal