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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5316467..5317361+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006303-T1 ID=KJC3_006303-T1|Name=KJC3_006303-T1|organism=Aspergillus niger KJC3|type=mRNA|length=895bp|location=Sequence derived from alignment at ch4:5316467..5317361+ (Aspergillus niger KJC3)
CACATACTCTGCACGCATCGTTGACCTGCGCCTTTCATTTATTGTCACCC
AAAACAAAACAACCGCTACCCTCATTGTCAATCACGATGCAGTTCAATAT
CCTCTGCGTCTTGACCCTCCTTGTCGCCTTCGTGGCCTCCGCGGCTGTTC
CTGAGGCCGCTCCCGATGTCACCAGCACATATGGAAGTATGCAGTTCGCC
TTTCTTCTGATGCTGTTCATATAGAAAGACAAGATTGCTAACAAAGCTTT
CTGTATAAGCCTGGTTCGATGTTGAAGACTTCGATTTGACTAATTTCAAA
TTGGCTACTCGCGATGAAGGTTTGTGCCTCTCTGTCTCTGTTGATATGGC
ATCCCTTTTTCAAACAGGCAAGAACTAAACCCTTCCTCTGAACACAGACG
AGTCCAATTCTGAATTGGCCAATGAAGATGACGACGGAACCATGGAAATT
CAGGACAGAAGATGCCATCGTCGTTGCCGCGTTGACTCTCATTGCTGCCA
TACTGATCAATGCGCGCTGGGCTCCTGCATGGGGCCTGGAAGGTGGCCTT
AAGTGTGATACATGCATCCTTGTCGACAGTATGCTTGGCGATATTCTGAT
TTTTGTTCAGTTATCTGGTGCATATCATGAGTTTGTGCTTGATGTATGGT
GGTGAAGAAGCAAGCTCTAGGCAGTCGACATGGTTGTTTTCATCTCGGTG
GTGTTGTGTTTTCTCTTCATATTTGCCAATCTTCTCAGCTTAGTCCATGA
TACTGAGTGGCTCTTCTGTTTCACTTATGTCACTTCAACTCTCATATCTC
TTTTGTTGTCTATGAGCTGTTGTTTGCCGAACAGGGCAATCGTCACTGTG
GACTGTTCTGTTGTCACCTGCTGCGCGGGACGACATAAGAGACGG back to topCoding sequence (CDS) from alignment at ch4:5316467..5317361+ >KJC3_006303-T1 ID=KJC3_006303-T1|Name=KJC3_006303-T1|organism=Aspergillus niger KJC3|type=CDS|length=945bp|location=Sequence derived from alignment at ch4:5316467..5317361+ (Aspergillus niger KJC3)
ATGCAGTTCAATATCCTCTGCGTCTTGACCCTCCTTGTCGCCTTCGTGGC
CTCCGCGGCTGTTCCTGAGGCCGCTCCCGATGTCACCAGCACATATGGAA
CCTGGTTCGATGTTGAAGACTTCGATTTGACTAATTTCAAATTGGCTACT
CGCGATGAAGACGAGTCCAATTCTGAATTGGCCAATGAAGATGACGACGG
AACCATGGAAATTCAGGACAGAAGATGCCATCGTCGTTGCCGCGTTGACT
CTCATTGCTGCCATACTGATCAATGCGCGCTGGGCTCCTGCATGGGGCCT
GGAAGGTGGCCTTAAATGCAGTTCAATATCCTCTGCGTCTTGACCCTCCT
TGTCGCCTTCGTGGCCTCCGCGGCTGTTCCTGAGGCCGCTCCCGATGTCA
CCAGCACATATGGAACCTGGTTCGATGTTGAAGACTTCGATTTGACTAAT
TTCAAATTGGCTACTCGCGATGAAGACGAGTCCAATTCTGAATTGGCCAA
TGAAGATGACGACGGAACCATGGAAATTCAGGACAGAAGATGCCATCGTC
GTTGCCGCGTTGACTCTCATTGCTGCCATACTGATCAATGCGCGCTGGGC
TCCTGCATGGGGCCTGGAAGGTGGCCTTAAATGCAGTTCAATATCCTCTG
CGTCTTGACCCTCCTTGTCGCCTTCGTGGCCTCCGCGGCTGTTCCTGAGG
CCGCTCCCGATGTCACCAGCACATATGGAACCTGGTTCGATGTTGAAGAC
TTCGATTTGACTAATTTCAAATTGGCTACTCGCGATGAAGACGAGTCCAA
TTCTGAATTGGCCAATGAAGATGACGACGGAACCATGGAAATTCAGGACA
GAAGATGCCATCGTCGTTGCCGCGTTGACTCTCATTGCTGCCATACTGAT
CAATGCGCGCTGGGCTCCTGCATGGGGCCTGGAAGGTGGCCTTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006303-T1.utr5p1 | KJC3_006303-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006303-T1.utr3p1 | KJC3_006303-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-19) |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5316467..5317361 + |
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