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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5330078..5331896+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006309-T1 ID=KJC3_006309-T1|Name=KJC3_006309-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1819bp|location=Sequence derived from alignment at ch4:5330078..5331896+ (Aspergillus niger KJC3)
ATGCAGTCTCGAACCCCTCGACCCAAACCCCCGAACTGGTCCCCTCAGCC
TCCCCTCTCCGTTTTCGTCCGCAATCTCCAGCTCCTCCAGCTCGATCGTC
ATGATGACTGGCCTCGCATCTCTCTTCGCTCCCTCGCAGATACGTCGCAG
AACCAGCGTCAGCGTATAAGAGCCATCGAATGGGCTCTATACCATCTGGT
CGCCCTTTGGGACCCTGACACCGCTCGGGATGTATGTTCCATCCCCTCAG
TGGCTTTGATGCCCGACTGACGGCATGCAGAAACTCCGGCCCTTCTTCCC
TCCGCTCGAGCCCCTGCAGTCCGTCAATCTGCGTGCTGCCTTGTTCCGCG
TGCTCTCTGAATTAAAGAAACAAGGCGATCTGGGCAGAGAAACCATTCTC
CGCAAGTCAATGCTGGATGATTGCAAAGGAGAGAAATTCGAGGAACTGTT
GGCCGTCTTCTCTACTGCGGTGCTGCGGAAGACCCTCTCAGCTTCCTCAG
ATCCCGCACTACAAAATGTGGCCATGAAGCTTTCATTGGCTTTCGGGCTG
ACGCGCGAGGAATACCAGCTTATGCTCCCCCTTGTCCTCGCCCATCGGGT
CTCCCTCAACCAAATCGGCGAGCGTCGCAACAGAGCCCGGGACACCCATG
AGAAGTTCGCTCAATTGCTAGAACTTAAGAAGCTGCAGCTTGACGAACGA
GCTAAGGAGAACCCTCCTCAACTCCCCGACACTGGCGCCGACATAGATGC
GCTGACCCATGACCTCAGGGCTAACTGGCTGGGGTGTGAGGATTGGGCGG
ATACCCTCGTCGATGGTGGTGCACAGGGCAGCAGCGACGTCTTTCTGGAA
CTCCCGTTCGACACCGCATGGGCAAAAGCAAAGGAATCAAGCGTGGATGG
CCTCCGTGCGAATTCGTCCCCGGATCTGCTAGTCGATTTGGAGTCTCGCG
TCTTCCGTCAGCGAGCCCGGCTCCAGCGCTGGCGCCAGTACAGTGCCTCT
ATGCGCAAACATGAACGGGTACAATCCGCAAGCTCAACGAAATCTCAGGC
ACTCGTCTTTCGGGAACATCAAGCACTCACCGTCGCCAGCATCTCCAAAG
CCGTTCGGCAGCCAGTGGAACGCGCCTCGCCCAAGGCAGACGACCGGGCA
CTGCTCTTCTCCATGACCGAGGCCATTGCCCGGATCAACGGCCGACCCGC
AGCGCATCGTCACCGCCATACCCATAGCGACTCGAGACCACGCAACCCTA
CAACAGTGTCCTCCAGCTCAGCAGCTGGAAGCAACAGATCATCTCCCCAG
GCTGAACTGGACACTACCCGCTCAACCACCACAAGAACATCAACACCCTC
CATCCCAGAGCCCCAGCCCAGCGTCCCCTCCTTCTCAACTACTGAAGTCC
CCGAAAGGGACCCTTCTCCCCCTCCTGAACGAACTAGCAGATTTACGCTC
GTCGAACGAACCCGCAAGTCCATGTCCCTTATCGTACCACCCACCCAACC
CCGGCCAAGAGAAAGTTTCCGGTCCCACCGACATCGGCCCTCTTTCCCCA
TCAACCAATTCGAAACTCCCCAGAAATCACACACCATTCCCAGTCGGGCC
TCTACGCCACGCGACGAGCTTTTTGACGAGGAAGCGGACTACGCCAGCGT
ATTCAAGTCGCGGCCCCGCGTGGCGCACAGTCCGGTCGCATCGCCGGCAG
TGCACATCAGCCCCATTGGGGATTTCGATCTGAGTCCAGACGAGGAAATT
GACCTGGACGGGGGAGACGAGGAGTATGTGCAGGATACTCCGTTGGCGTC
GAGGCGGAGGGTTTTATGA back to topCoding sequence (CDS) from alignment at ch4:5330078..5331896+ >KJC3_006309-T1 ID=KJC3_006309-T1|Name=KJC3_006309-T1|organism=Aspergillus niger KJC3|type=CDS|length=3540bp|location=Sequence derived from alignment at ch4:5330078..5331896+ (Aspergillus niger KJC3)
ATGCAGTCTCGAACCCCTCGACCCAAACCCCCGAACTGGTCCCCTCAGCC
TCCCCTCTCCGTTTTCGTCCGCAATCTCCAGCTCCTCCAGCTCGATCGTC
ATGATGACTGGCCTCGCATCTCTCTTCGCTCCCTCGCAGATACGTCGCAG
AACCAGCGTCAGCGTATAAGAGCCATCGAATGGGCTCTATACCATCTGGT
CGCCCTTTGGGACCCTGACACCGCTCGGGATAAACTCCGGCCCTTCTTCC
CTCCGCTCGAGCCCCTGCAGTCCGTCAATCTGCGTGCTGCCTTGTTCCGC
GTGCTCTCTGAATTAAAGAAACAAGGCGATCTGGGCAGAGAAACCATTCT
CCGCAAGTCAATGCTGGATGATTGCAAAGGAGAGAAATTCGAGGAACTGT
TGGCCGTCTTCTCTACTGCGGTGCTGCGGAAGACCCTCTCAGCTTCCTCA
GATCCCGCACTACAAAATGTGGCCATGAAGCTTTCATTGGCTTTCGGGCT
GACGCGCGAGGAATACCAGCTTATGCTCCCCCTTGTCCTCGCCCATCGGG
TCTCCCTCAACCAAATCGGCGAGCGTCGCAACAGAGCCCGGGACACCCAT
GAGAAGTTCGCTCAATTGCTAGAACTTAAGAAGCTGCAGCTTGACGAACG
AGCTAAGGAGAACCCTCCTCAACTCCCCGACACTGGCGCCGACATAGATG
CGCTGACCCATGACCTCAGGGCTAACTGGCTGGGGTGTGAGGATTGGGCG
GATACCCTCGTCGATGGTGGTGCACAGGGCAGCAGCGACGTCTTTCTGGA
ACTCCCGTTCGACACCGCATGGGCAAAAGCAAAGGAATCAAGCGTGGATG
GCCTCCGTGCGAATTCGTCCCCGGATCTGCTAGTCGATTTGGAGTCTCGC
GTCTTCCGTCAGCGAGCCCGGCTCCAGCGCTGGCGCCAGTACAGTGCCTC
TATGCGCAAACATGAACGGGTACAATCCGCAAGCTCAACGAAATCTCAGG
CACTCGTCTTTCGGGAACATCAAGCACTCACCGTCGCCAGCATCTCCAAA
GCCGTTCGGCAGCCAGTGGAACGCGCCTCGCCCAAGGCAGACGACCGGGC
ACTGCTCTTCTCCATGACCGAGGCCATTGCCCGGATCAACGGCCGACCCG
CAGCGCATCGTCACCGCCATACCCATAGCGACTCGAGACCACGCAACCCT
ACAACAGTGTCCTCCAGCTCAGCAGCTGGAAGCAACAGATCATCTCCCCA
GGCTGAACTGGACACTACCCGCTCAACCACCACAAGAACATCAACACCCT
CCATCCCAGAGCCCCAGCCCAGCGTCCCCTCCTTCTCAACTACTGAAGTC
CCCGAAAGGGACCCTTCTCCCCCTCCTGAACGAACTAGCAGATTTACGCT
CGTCGAACGAACCCGCAAGTCCATGTCCCTTATCGTACCACCCACCCAAC
CCCGGCCAAGAGAAAGTTTCCGGTCCCACCGACATCGGCCCTCTTTCCCC
ATCAACCAATTCGAAACTCCCCAGAAATCACACACCATTCCCAGTCGGGC
CTCTACGCCACGCGACGAGCTTTTTGACGAGGAAGCGGACTACGCCAGCG
TATTCAAGTCGCGGCCCCGCGTGGCGCACAGTCCGGTCGCATCGCCGGCA
GTGCACATCAGCCCCATTGGGGATTTCGATCTGAGTCCAGACGAGGAAAT
TGACCTGGACGGGGGAGACGAGGAGTATGTGCAGGATACTCCGTTGGCGT
CGAGGCGGAGGGTTTTATGAATGCAGTCTCGAACCCCTCGACCCAAACCC
CCGAACTGGTCCCCTCAGCCTCCCCTCTCCGTTTTCGTCCGCAATCTCCA
GCTCCTCCAGCTCGATCGTCATGATGACTGGCCTCGCATCTCTCTTCGCT
CCCTCGCAGATACGTCGCAGAACCAGCGTCAGCGTATAAGAGCCATCGAA
TGGGCTCTATACCATCTGGTCGCCCTTTGGGACCCTGACACCGCTCGGGA
TAAACTCCGGCCCTTCTTCCCTCCGCTCGAGCCCCTGCAGTCCGTCAATC
TGCGTGCTGCCTTGTTCCGCGTGCTCTCTGAATTAAAGAAACAAGGCGAT
CTGGGCAGAGAAACCATTCTCCGCAAGTCAATGCTGGATGATTGCAAAGG
AGAGAAATTCGAGGAACTGTTGGCCGTCTTCTCTACTGCGGTGCTGCGGA
AGACCCTCTCAGCTTCCTCAGATCCCGCACTACAAAATGTGGCCATGAAG
CTTTCATTGGCTTTCGGGCTGACGCGCGAGGAATACCAGCTTATGCTCCC
CCTTGTCCTCGCCCATCGGGTCTCCCTCAACCAAATCGGCGAGCGTCGCA
ACAGAGCCCGGGACACCCATGAGAAGTTCGCTCAATTGCTAGAACTTAAG
AAGCTGCAGCTTGACGAACGAGCTAAGGAGAACCCTCCTCAACTCCCCGA
CACTGGCGCCGACATAGATGCGCTGACCCATGACCTCAGGGCTAACTGGC
TGGGGTGTGAGGATTGGGCGGATACCCTCGTCGATGGTGGTGCACAGGGC
AGCAGCGACGTCTTTCTGGAACTCCCGTTCGACACCGCATGGGCAAAAGC
AAAGGAATCAAGCGTGGATGGCCTCCGTGCGAATTCGTCCCCGGATCTGC
TAGTCGATTTGGAGTCTCGCGTCTTCCGTCAGCGAGCCCGGCTCCAGCGC
TGGCGCCAGTACAGTGCCTCTATGCGCAAACATGAACGGGTACAATCCGC
AAGCTCAACGAAATCTCAGGCACTCGTCTTTCGGGAACATCAAGCACTCA
CCGTCGCCAGCATCTCCAAAGCCGTTCGGCAGCCAGTGGAACGCGCCTCG
CCCAAGGCAGACGACCGGGCACTGCTCTTCTCCATGACCGAGGCCATTGC
CCGGATCAACGGCCGACCCGCAGCGCATCGTCACCGCCATACCCATAGCG
ACTCGAGACCACGCAACCCTACAACAGTGTCCTCCAGCTCAGCAGCTGGA
AGCAACAGATCATCTCCCCAGGCTGAACTGGACACTACCCGCTCAACCAC
CACAAGAACATCAACACCCTCCATCCCAGAGCCCCAGCCCAGCGTCCCCT
CCTTCTCAACTACTGAAGTCCCCGAAAGGGACCCTTCTCCCCCTCCTGAA
CGAACTAGCAGATTTACGCTCGTCGAACGAACCCGCAAGTCCATGTCCCT
TATCGTACCACCCACCCAACCCCGGCCAAGAGAAAGTTTCCGGTCCCACC
GACATCGGCCCTCTTTCCCCATCAACCAATTCGAAACTCCCCAGAAATCA
CACACCATTCCCAGTCGGGCCTCTACGCCACGCGACGAGCTTTTTGACGA
GGAAGCGGACTACGCCAGCGTATTCAAGTCGCGGCCCCGCGTGGCGCACA
GTCCGGTCGCATCGCCGGCAGTGCACATCAGCCCCATTGGGGATTTCGAT
CTGAGTCCAGACGAGGAAATTGACCTGGACGGGGGAGACGAGGAGTATGT
GCAGGATACTCCGTTGGCGTCGAGGCGGAGGGTTTTATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR028163 |
| DBxref | PFAM:PF14661 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5330078..5331896 + |
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