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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5335232..5335979+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006311-T1 ID=KJC3_006311-T1|Name=KJC3_006311-T1|organism=Aspergillus niger KJC3|type=mRNA|length=748bp|location=Sequence derived from alignment at ch4:5335232..5335979+ (Aspergillus niger KJC3)
CCCACATCTTCGTCATCCTCCTCTACTATCCTTCTGTCTCACGAATCATC
CTACGATTCCTTTCCAGACTATCTGTGCATATCTTCTATCATCAGTACGA
TCTCGAAATGTCTGCTACGATGGATGCCGCGCGCCGCTTCTTCCTGTCGC
CGCAGTTTGCCGTGGCGGGGGCCAGTAACGATCGCAGCAAGTTTGGCTAC
AAGAGTAGGTCCCATTGCCATCACTTTGCAGGCCGTTGCGCCGGCTGACC
AGCAGTCTTTGCTTGGTATCATCAACACTCTCTGCCCGTTACTCCCCTCA
ACCCCCGCGCCCCTGAGATCGAGCTGCCGTCGCAGACTTACAAGACGGTC
GCATCGCCCCGCGCGTTGCCCAACCCCGGCCAGACTTCCCTGTCTATTGT
GACACCTCCCCCAGTGACCCTTGCCCTTCTCAAGGAGGCCCACAGTGTGG
GGATCCCCGCTGTCTGGCTACAGCCAGGCACGTATGATAAGAGTGTGTTG
GACTATCTAGATGGTCATTTCGAGGCAGCGGTGGTGGGAGACGGTGGTGT
GGGCGGCGAGGGTTGGTGTGTGCTGGTGGATGGAGAAAATGCGTTGAGGG
AGGCCCATCGCGAGTGGAAGGCCCAGCTGTAGTTAGGCTTCATTTGAAAT
AAAGAACTAGGAACAATAGTAATATATGCTGTTGCGGTGAACAAAGTAAC
GGGGAATGAAGAAATGGTAAAAAAAAGAAAGAAAGAGGGAGGCTGGCG back to topCoding sequence (CDS) from alignment at ch4:5335232..5335979+ >KJC3_006311-T1 ID=KJC3_006311-T1|Name=KJC3_006311-T1|organism=Aspergillus niger KJC3|type=CDS|length=948bp|location=Sequence derived from alignment at ch4:5335232..5335979+ (Aspergillus niger KJC3)
ATGTCTGCTACGATGGATGCCGCGCGCCGCTTCTTCCTGTCGCCGCAGTT
TGCCGTGGCGGGGGCCAGTAACGATCGCAGCAAGTTTGGCTACAAGATCT
TTGCTTGGTATCATCAACACTCTCTGCCCGTTACTCCCCTCAACCCCCGC
GCCCCTGAGATCGAGCTGCCGTCGCAGACTTACAAGACGGTCGCATCGCC
CCGCGCGTTGCCCAACCCCGGCCAGACTTCCCTGTCTATTGTGACACCTC
CCCCAGTGACCCTTGCCCTTCTCAAGGAGGCCCACAGTGTGGGGATCCCC
GCTGTCTGGCTACAGCCAGGCACGTATGATAAGAGTGTGTTGGACTATCT
AGATGGTCATTTCGAGGCAGCGGTGGTGGGAGACGGTGGTGTGGGCGGCG
AGGGTTGGTGTGTGCTGGTGGATGGAGAAAATGCGTTGAGGGAGGCCCAT
CGCGAGTGGAAGGCCCAGCTGTAGATGTCTGCTACGATGGATGCCGCGCG
CCGCTTCTTCCTGTCGCCGCAGTTTGCCGTGGCGGGGGCCAGTAACGATC
GCAGCAAGTTTGGCTACAAGATCTTTGCTTGGTATCATCAACACTCTCTG
CCCGTTACTCCCCTCAACCCCCGCGCCCCTGAGATCGAGCTGCCGTCGCA
GACTTACAAGACGGTCGCATCGCCCCGCGCGTTGCCCAACCCCGGCCAGA
CTTCCCTGTCTATTGTGACACCTCCCCCAGTGACCCTTGCCCTTCTCAAG
GAGGCCCACAGTGTGGGGATCCCCGCTGTCTGGCTACAGCCAGGCACGTA
TGATAAGAGTGTGTTGGACTATCTAGATGGTCATTTCGAGGCAGCGGTGG
TGGGAGACGGTGGTGTGGGCGGCGAGGGTTGGTGTGTGCTGGTGGATGGA
GAAAATGCGTTGAGGGAGGCCCATCGCGAGTGGAAGGCCCAGCTGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006311-T1.utr5p1 | KJC3_006311-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006311-T1.utr3p1 | KJC3_006311-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR003781 |
| DBxref | PFAM:PF13380 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5335232..5335979 + |
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