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KJC3_006326-T2, KJC3_006326-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006326-T2
Unique NameKJC3_006326-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5362349..5365351+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006326-T2 ID=KJC3_006326-T2|Name=KJC3_006326-T2|organism=Aspergillus niger KJC3|type=mRNA|length=3003bp|location=Sequence derived from alignment at ch4:5362349..5365351+ (Aspergillus niger KJC3)
CATCATCATCATCATCATCATCATCATCACAAAGGAGCTGTATACAAAGA
GTATAGTATGCATGTATGCATGTATGTATGTATTTACGTGGGATACAGAA
TGTGTAGAGAATCAGTTAGGATTCGGAAAGTCACGACTCAAGAATCCTCC
GAAAGAGGCAAGAATGTTGGTAACAAAATAACAGCAAAAAAAGAAAGAAG
GCAAAAAGAGCAGGTGATGCCCTCGTGACCTGCCCGCATCCATCATCCCA
AATCCTCCCGTCAGGAACTCCAGCTTCATCCACTCCATTCTTTCTTAGCG
CTACTCCATCCAATCTCCAGTCTCTCTCCTCCTTCCCTCCATCTCGGTTC
GTCTCCATCCGCTTTTTCTCCGCCGGCGAAAACGGATTCCCCCCGATTCA
GGTACTCACCGTCCACATCTCCCCGTTTGTCGTAGCCTGCTCCGGCTCTC
TCCAGACAGTCTCTCCACTCTCTCCCCACTCCAAGACACGCTCTCGAAGC
ATCCAATGAACTCTCCGCCCCCTAGCTTCCGAATCTCCCACCTCGTTCGC
CTGTCTTCGGGCCCTTGAGATCTGGGCCCCCGTTTTTTCTTGCCATGGTC
CTACCCCGAGGATGGGGTCCTCCAATCCCTGGGATGGAGGCGAATTGCCG
ACGGATGGAGCGTCAAATTCTTTCACTTCCATTTTAGTGGCATTCACTCG
TTGACACCGTCATACTTACCGAGTTCATCTTTGTGTGCGGCCCCCCTCCC
CCCCCCTCTCCCCCTCTGCCCGGACCCCATATATATCCCTCCATCTCCCC
CGGGTCTGTCAGCCCTTTGGATGTCTTTCTCTCCCATCAATCTTCTCTTT
TTCCCATCTTCCCATCCCTGGCAGAGGATTCCGCGTTGTATGAATCCACC
GGCAACATGGGTGTCTCTAATATGATGTCCCGGTTCAAGCCTCAGGCGGA
CCACTCTGAGTCCTCCACTGAGGCTCCTACTCCTGCTCGCTCCAACTCCG
CCGTCGAGAAGGACAATGTCTTGCTCGATGACAGTCCCGTCAAGTACTTG
ACCTGGCGCTCCTTCATCCTGGGTATCGTCGTGTCCATGGGTGGTTTCAT
CTTCGGTTACTCTACTGGTATGGTGACATCGATTCTCTGCAGCTAGTCCC
CTCGGTTGCTAACCTTTTCCACCACCAGGTCAAATCTCTGGTTTCGAGAC
TATGGATGACTTCCTCCAACGTTTCGGTCAGGAACAGGCGGATGGATCCT
ATGCTTTCAGCAACGTCCGTAGTGGTCTCATTGTCGGTCTGGTAAGTGGC
ATACATCATGGACTGTCCCTAGAGACCAACCCGACTGACAATCTCTTCAG
CTGTGTATCGGTACTATGATCGGTGCCCTGGTTGCTGCTCCTATCGCAGA
CCGCATGGGCCGCAAGCTCTCCATCTGTCTCTGGTCTGTCATCCACATCG
TCGGTATCATCATTCAGATTGCCACCGACTCCAACTGGGTCCAGGTCGCT
ATGGGTCGTTGGGTTGCCGGTCTGGGTGTTGGTGCCCTCTCCAGCATTGT
CCCCATGTACCAGAGTGAATCTGCTCCCCGTCAGGTCCGTGGTGCCATGG
TCAGTGCCTTCCAGCTGTTCGTTGCCTTCGGTATCTTCATCTCCTACATC
ATCAACTTCGGTACCGAGAGAATCCAGTCGACTGCTTCCTGGCGTATCAC
CATGGGCATTGGCTTCGCCTGGCCCTTGATTCTGGCTGTTGGCTCTCTCT
TCCTGCCCGAGTCTCCTCGTTTCGCCTACCGTCAGGGTCGTATCGATGAG
GCCCGTGAGGTTATGTGCAAGCTGTACGGTGTCAGCCCGAACCACCGCGT
CATCGCCCAGGAGATGAAGGACATGAAGGACAAGCTCGACGAGGAGAAGG
CCGCCGGTCAGGCTGCCTGGCACGAGCTGTTCACCGGCCCTCGCATGCTC
TACCGTACCCTGCTCGGTATTGCTCTGCAGTCCCTCCAGCAGCTGACCGG
TGCCAACTTTATCTTCTACTACGGAAACAGTATCTTCACCTCCACTGGTC
TGAGCAACAGCTACGTCACTCAGATCATTCTGGGTGCTGTCAACTTCGGT
ATGACCCTGCCCGGTCTGTACGTCGTCGAGCACTTCGGTCGTCGTAACAG
TCTGATGGTTGGTGCTGCCTGGATGTTCATTTGCTTCATGATCTGGGCTT
CCGTTGGTCACTTCGCTCTGGATCTTGCCGACCCTCAGGCCACTCCTGCC
GCTGGTAAGGCCATGATCATCTTCACTTGCTTCTTCATTGTCGGTTTCGC
CACCACCTGGGGTCCTATCGTCTGGGCCATCTGTGGTGAGATGTACCCCG
CCCGCTACCGTGCTCTCTGCATTGGTATTGCCACCGCTGCCAACTGGACC
TGGAACTTCCTCATCTCCTTCTTCACCCCCTTCATCTCTAGCTCCATTGA
CTTCGCCTACGGCTACGTCTTTGCTGGATGCTGTTTCGCCGCCATCTTCG
TTGTCTTCTTCTTCGTCAATGAGACCCAGGGTCGCACTCTTGAGGAGGTT
GACACCATGTACGTGCTCCACGTCAAGCCCTGGCAGAGTGCCAGCTGGGT
TCCCCCGGAGGGCATTGTCCAGGACATGCACCGCCCCCCTTCCTCTTCCA
AGCAGGAGGGTCAGGCTGAGATGGCTGAGCACACCGAGCCCACTGAGCTC
CGCGAGTAAGCCACTCGCACTCGCGCGAACTCATTTTGCTAGTTGCTCTT
GTACATTGAACCTGCATCTTAAGCTTTGATTTATTTAATTGCATGATTGC
TCTTTGCATCGCATTTGCTAGCTAGCTATTATCGGCATGAATGCGTCCAC
GCACGCAATGTTTGAATGGCTTGACTCATCGGGAAGGATATGGTTGGGAA
CTACGACATCGGCGTTTGGTGATACCTGCAACTGCATACATCTGTTGACG
TTGAAATTTTTTTGAGGTTATTGAGAAACGATTTAATACAAGTATATACG
AAC
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Coding sequence (CDS) from alignment at ch4:5362349..5365351+

>KJC3_006326-T2 ID=KJC3_006326-T2|Name=KJC3_006326-T2|organism=Aspergillus niger KJC3|type=CDS|length=4509bp|location=Sequence derived from alignment at ch4:5362349..5365351+ (Aspergillus niger KJC3)
ATGGGTGGTTTCATCTTCGGTTACTCTACTGGTCAAATCTCTGGTTTCGA
GACTATGGATGACTTCCTCCAACGTTTCGGTCAGGAACAGGCGGATGGAT
CCTATGCTTTCAGCAACGTCCGTAGTGGTCTCATTGTCGGTCTGCTGTGT
ATCGGTACTATGATCGGTGCCCTGGTTGCTGCTCCTATCGCAGACCGCAT
GGGCCGCAAGCTCTCCATCTGTCTCTGGTCTGTCATCCACATCGTCGGTA
TCATCATTCAGATTGCCACCGACTCCAACTGGGTCCAGGTCGCTATGGGT
CGTTGGGTTGCCGGTCTGGGTGTTGGTGCCCTCTCCAGCATTGTCCCCAT
GTACCAGAGTGAATCTGCTCCCCGTCAGGTCCGTGGTGCCATGGTCAGTG
CCTTCCAGCTGTTCGTTGCCTTCGGTATCTTCATCTCCTACATCATCAAC
TTCGGTACCGAGAGAATCCAGTCGACTGCTTCCTGGCGTATCACCATGGG
CATTGGCTTCGCCTGGCCCTTGATTCTGGCTGTTGGCTCTCTCTTCCTGC
CCGAGTCTCCTCGTTTCGCCTACCGTCAGGGTCGTATCGATGAGGCCCGT
GAGGTTATGTGCAAGCTGTACGGTGTCAGCCCGAACCACCGCGTCATCGC
CCAGGAGATGAAGGACATGAAGGACAAGCTCGACGAGGAGAAGGCCGCCG
GTCAGGCTGCCTGGCACGAGCTGTTCACCGGCCCTCGCATGCTCTACCGT
ACCCTGCTCGGTATTGCTCTGCAGTCCCTCCAGCAGCTGACCGGTGCCAA
CTTTATCTTCTACTACGGAAACAGTATCTTCACCTCCACTGGTCTGAGCA
ACAGCTACGTCACTCAGATCATTCTGGGTGCTGTCAACTTCGGTATGACC
CTGCCCGGTCTGTACGTCGTCGAGCACTTCGGTCGTCGTAACAGTCTGAT
GGTTGGTGCTGCCTGGATGTTCATTTGCTTCATGATCTGGGCTTCCGTTG
GTCACTTCGCTCTGGATCTTGCCGACCCTCAGGCCACTCCTGCCGCTGGT
AAGGCCATGATCATCTTCACTTGCTTCTTCATTGTCGGTTTCGCCACCAC
CTGGGGTCCTATCGTCTGGGCCATCTGTGGTGAGATGTACCCCGCCCGCT
ACCGTGCTCTCTGCATTGGTATTGCCACCGCTGCCAACTGGACCTGGAAC
TTCCTCATCTCCTTCTTCACCCCCTTCATCTCTAGCTCCATTGACTTCGC
CTACGGCTACGTCTTTGCTGGATGCTGTTTCGCCGCCATCTTCGTTGTCT
TCTTCTTCGTCAATGAGACCCAGGGTCGCACTCTTGAGGAGGTTGACACC
ATGTACGTGCTCCACGTCAAGCCCTGGCAGAGTGCCAGCTGGGTTCCCCC
GGAGGGCATTGTCCAGGACATGCACCGCCCCCCTTCCTCTTCCAAGCAGG
AGGGTCAGGCTGAGATGGCTGAGCACACCGAGCCCACTGAGCTCCGCGAG
TAAATGGGTGGTTTCATCTTCGGTTACTCTACTGGTCAAATCTCTGGTTT
CGAGACTATGGATGACTTCCTCCAACGTTTCGGTCAGGAACAGGCGGATG
GATCCTATGCTTTCAGCAACGTCCGTAGTGGTCTCATTGTCGGTCTGCTG
TGTATCGGTACTATGATCGGTGCCCTGGTTGCTGCTCCTATCGCAGACCG
CATGGGCCGCAAGCTCTCCATCTGTCTCTGGTCTGTCATCCACATCGTCG
GTATCATCATTCAGATTGCCACCGACTCCAACTGGGTCCAGGTCGCTATG
GGTCGTTGGGTTGCCGGTCTGGGTGTTGGTGCCCTCTCCAGCATTGTCCC
CATGTACCAGAGTGAATCTGCTCCCCGTCAGGTCCGTGGTGCCATGGTCA
GTGCCTTCCAGCTGTTCGTTGCCTTCGGTATCTTCATCTCCTACATCATC
AACTTCGGTACCGAGAGAATCCAGTCGACTGCTTCCTGGCGTATCACCAT
GGGCATTGGCTTCGCCTGGCCCTTGATTCTGGCTGTTGGCTCTCTCTTCC
TGCCCGAGTCTCCTCGTTTCGCCTACCGTCAGGGTCGTATCGATGAGGCC
CGTGAGGTTATGTGCAAGCTGTACGGTGTCAGCCCGAACCACCGCGTCAT
CGCCCAGGAGATGAAGGACATGAAGGACAAGCTCGACGAGGAGAAGGCCG
CCGGTCAGGCTGCCTGGCACGAGCTGTTCACCGGCCCTCGCATGCTCTAC
CGTACCCTGCTCGGTATTGCTCTGCAGTCCCTCCAGCAGCTGACCGGTGC
CAACTTTATCTTCTACTACGGAAACAGTATCTTCACCTCCACTGGTCTGA
GCAACAGCTACGTCACTCAGATCATTCTGGGTGCTGTCAACTTCGGTATG
ACCCTGCCCGGTCTGTACGTCGTCGAGCACTTCGGTCGTCGTAACAGTCT
GATGGTTGGTGCTGCCTGGATGTTCATTTGCTTCATGATCTGGGCTTCCG
TTGGTCACTTCGCTCTGGATCTTGCCGACCCTCAGGCCACTCCTGCCGCT
GGTAAGGCCATGATCATCTTCACTTGCTTCTTCATTGTCGGTTTCGCCAC
CACCTGGGGTCCTATCGTCTGGGCCATCTGTGGTGAGATGTACCCCGCCC
GCTACCGTGCTCTCTGCATTGGTATTGCCACCGCTGCCAACTGGACCTGG
AACTTCCTCATCTCCTTCTTCACCCCCTTCATCTCTAGCTCCATTGACTT
CGCCTACGGCTACGTCTTTGCTGGATGCTGTTTCGCCGCCATCTTCGTTG
TCTTCTTCTTCGTCAATGAGACCCAGGGTCGCACTCTTGAGGAGGTTGAC
ACCATGTACGTGCTCCACGTCAAGCCCTGGCAGAGTGCCAGCTGGGTTCC
CCCGGAGGGCATTGTCCAGGACATGCACCGCCCCCCTTCCTCTTCCAAGC
AGGAGGGTCAGGCTGAGATGGCTGAGCACACCGAGCCCACTGAGCTCCGC
GAGTAAATGGGTGGTTTCATCTTCGGTTACTCTACTGGTCAAATCTCTGG
TTTCGAGACTATGGATGACTTCCTCCAACGTTTCGGTCAGGAACAGGCGG
ATGGATCCTATGCTTTCAGCAACGTCCGTAGTGGTCTCATTGTCGGTCTG
CTGTGTATCGGTACTATGATCGGTGCCCTGGTTGCTGCTCCTATCGCAGA
CCGCATGGGCCGCAAGCTCTCCATCTGTCTCTGGTCTGTCATCCACATCG
TCGGTATCATCATTCAGATTGCCACCGACTCCAACTGGGTCCAGGTCGCT
ATGGGTCGTTGGGTTGCCGGTCTGGGTGTTGGTGCCCTCTCCAGCATTGT
CCCCATGTACCAGAGTGAATCTGCTCCCCGTCAGGTCCGTGGTGCCATGG
TCAGTGCCTTCCAGCTGTTCGTTGCCTTCGGTATCTTCATCTCCTACATC
ATCAACTTCGGTACCGAGAGAATCCAGTCGACTGCTTCCTGGCGTATCAC
CATGGGCATTGGCTTCGCCTGGCCCTTGATTCTGGCTGTTGGCTCTCTCT
TCCTGCCCGAGTCTCCTCGTTTCGCCTACCGTCAGGGTCGTATCGATGAG
GCCCGTGAGGTTATGTGCAAGCTGTACGGTGTCAGCCCGAACCACCGCGT
CATCGCCCAGGAGATGAAGGACATGAAGGACAAGCTCGACGAGGAGAAGG
CCGCCGGTCAGGCTGCCTGGCACGAGCTGTTCACCGGCCCTCGCATGCTC
TACCGTACCCTGCTCGGTATTGCTCTGCAGTCCCTCCAGCAGCTGACCGG
TGCCAACTTTATCTTCTACTACGGAAACAGTATCTTCACCTCCACTGGTC
TGAGCAACAGCTACGTCACTCAGATCATTCTGGGTGCTGTCAACTTCGGT
ATGACCCTGCCCGGTCTGTACGTCGTCGAGCACTTCGGTCGTCGTAACAG
TCTGATGGTTGGTGCTGCCTGGATGTTCATTTGCTTCATGATCTGGGCTT
CCGTTGGTCACTTCGCTCTGGATCTTGCCGACCCTCAGGCCACTCCTGCC
GCTGGTAAGGCCATGATCATCTTCACTTGCTTCTTCATTGTCGGTTTCGC
CACCACCTGGGGTCCTATCGTCTGGGCCATCTGTGGTGAGATGTACCCCG
CCCGCTACCGTGCTCTCTGCATTGGTATTGCCACCGCTGCCAACTGGACC
TGGAACTTCCTCATCTCCTTCTTCACCCCCTTCATCTCTAGCTCCATTGA
CTTCGCCTACGGCTACGTCTTTGCTGGATGCTGTTTCGCCGCCATCTTCG
TTGTCTTCTTCTTCGTCAATGAGACCCAGGGTCGCACTCTTGAGGAGGTT
GACACCATGTACGTGCTCCACGTCAAGCCCTGGCAGAGTGCCAGCTGGGT
TCCCCCGGAGGGCATTGTCCAGGACATGCACCGCCCCCCTTCCTCTTCCA
AGCAGGAGGGTCAGGCTGAGATGGCTGAGCACACCGAGCCCACTGAGCTC
CGCGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006326KJC3_006326Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006326-T2KJC3_006326-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006326-T2.utr5p1KJC3_006326-T2.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_006326-T2.utr5p2KJC3_006326-T2.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006326-T2.exon1KJC3_006326-T2.exon1Aspergillus niger KJC3exon
KJC3_006326-T2.exon2KJC3_006326-T2.exon2Aspergillus niger KJC3exon
KJC3_006326-T2.exon3KJC3_006326-T2.exon3Aspergillus niger KJC3exon
KJC3_006326-T2.exon4KJC3_006326-T2.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006326-T2.cdsKJC3_006326-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006326-T2.utr3p1KJC3_006326-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR005828
DBxrefInterPro:IPR003663
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5362349..5365351 +
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