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KJC3_006332-T1, KJC3_006332-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006332-T1
Unique NameKJC3_006332-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:5375609..5376739-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006332-T1 ID=KJC3_006332-T1|Name=KJC3_006332-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1131bp|location=Sequence derived from alignment at ch4:5375609..5376739- (Aspergillus niger KJC3)
TCCCGAGCGGCGGAGCTGCGCCGATAACCTCCCTCTCGATAACCACGTAA
CTCCGTCCCCCGTTCCGACCAGCTAGCTGCGCGACAATCCAGTCTGAGCC
CCGTCCTCCACCTACTACTGCGACCCTACCTTCTTCCAGCGAATCAAACA
GACGACCGACTTCTCGAAAGCCGCATTCGCGCCGTTTCACCAGCCAGCCA
GCGAGTCAGCTACCCAGCTAGTTAGCTACCTACCTCCACCGGTCCTCAAA
TCCACGACCTACACCTCGCAAGCAAGAGACAAAGAGAACAGAAACAGCAA
GGCTGGACCTGCTGTACACGACACAACACCTATCATCTCTGAACCATATA
CTCGATCGATCGATCGGAGCAAGAAAGCAAAATGGCGAACGGGTATGTCA
TGTTTGGTACCTCTCTATAGACTGGATATCTTTCCATGCGCTCTCCCAGT
GATGGATAAGAAAGACATCATGGCTATGATACTGCTAAATGAAAACATAC
ACTAACCTGATATTCTGGAAATACAGCTGGAGTTTAATCATCGGCCTCAT
CTTCGTGGTTGTTGCCTCCGTCCTGGCTTGGATCTTTAGTCCTAAGGGGG
AGAATCAGACGTGCGTTTTATACATCCTCTTTCCCACCTTTAATACAATC
GAAGAGGTGCTGTGTTTACTGACGTTTTGTCTTTTGGGAATGGAATAGTG
TCTTCCGCAGCACGCTCGTGCTTTCTTTCGTTTGTTGTTATTTGATGTGG
GGTATGTCGAACCTAACACTGATTCCCTTTTCGCTCTTACTCTGTGGCTT
TGGCAGGGCGTGGCTAACTGGTATTGCTTTGTAGCTATTACATTCCTGGC
GCAGTGGCATCCGTTGATCGTGCCAAAGAGGGCGGATATTCGGCCGGGGA
GGGTACCGCAGTAGTTTGATGCTTTTTTGCTGTTTGCCTGTGAAGAGGCG
AGGCTGTTTCAGGGCGATGTGGCTGGGATGGGATGTGGTTGAATAGTTAA
ATACCAGGGGATGCGTGGAATAAGGGGCCTATGCCCTGGCCGTGGGGGAG
ATGTGGCTGAGGGTGAAGTGGAGGGAGGGAGGTGATACCATGATATAAAA
TGTGGGATTACTGTATAGCTACGCTACTATA
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Coding sequence (CDS) from alignment at ch4:5375609..5376739-

>KJC3_006332-T1 ID=KJC3_006332-T1|Name=KJC3_006332-T1|organism=Aspergillus niger KJC3|type=CDS|length=912bp|location=Sequence derived from alignment at ch4:5375609..5376739- (Aspergillus niger KJC3)
CTATTACATTCCTGGCGCAGTGGCATCCGTTGATCGTGCCAAAGAGGGCG
GATATTCGGCCGGGGAGGGTACCGCAGTAGTGTCTTCCGCAGCACGCTCG
TGCTTTCTTTCGTTTGTTGTTATTTGATGTGGGCTGGAGTTTAATCATCG
GCCTCATCTTCGTGGTTGTTGCCTCCGTCCTGGCTTGGATCTTTAGTCCT
AAGGGGGAGAATCAGACATGGCGAACGGCTATTACATTCCTGGCGCAGTG
GCATCCGTTGATCGTGCCAAAGAGGGCGGATATTCGGCCGGGGAGGGTAC
CGCAGTAGTGTCTTCCGCAGCACGCTCGTGCTTTCTTTCGTTTGTTGTTA
TTTGATGTGGGCTGGAGTTTAATCATCGGCCTCATCTTCGTGGTTGTTGC
CTCCGTCCTGGCTTGGATCTTTAGTCCTAAGGGGGAGAATCAGACATGGC
GAACGGCTATTACATTCCTGGCGCAGTGGCATCCGTTGATCGTGCCAAAG
AGGGCGGATATTCGGCCGGGGAGGGTACCGCAGTAGTGTCTTCCGCAGCA
CGCTCGTGCTTTCTTTCGTTTGTTGTTATTTGATGTGGGCTGGAGTTTAA
TCATCGGCCTCATCTTCGTGGTTGTTGCCTCCGTCCTGGCTTGGATCTTT
AGTCCTAAGGGGGAGAATCAGACATGGCGAACGGCTATTACATTCCTGGC
GCAGTGGCATCCGTTGATCGTGCCAAAGAGGGCGGATATTCGGCCGGGGA
GGGTACCGCAGTAGTGTCTTCCGCAGCACGCTCGTGCTTTCTTTCGTTTG
TTGTTATTTGATGTGGGCTGGAGTTTAATCATCGGCCTCATCTTCGTGGT
TGTTGCCTCCGTCCTGGCTTGGATCTTTAGTCCTAAGGGGGAGAATCAGA
CATGGCGAACGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0033179proton-transporting V-type ATPase, V0 domain
Vocabulary: Biological Process
TermDefinition
GO:1902600proton transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0015078proton transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006332KJC3_006332Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006332-T1KJC3_006332-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006332-T1.cdsKJC3_006332-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006332-T1.utr3p1KJC3_006332-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006332-T1.exon4KJC3_006332-T1.exon4Aspergillus niger KJC3exon
KJC3_006332-T1.exon3KJC3_006332-T1.exon3Aspergillus niger KJC3exon
KJC3_006332-T1.exon2KJC3_006332-T1.exon2Aspergillus niger KJC3exon
KJC3_006332-T1.exon1KJC3_006332-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006332-T1.utr5p1KJC3_006332-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteSECRETED:SignalP(1-21)
DBxrefInterPro:IPR008389
DBxrefPFAM:PF05493
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:5375609..5376739 -
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