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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5378720..5380851- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006334-T1 ID=KJC3_006334-T1|Name=KJC3_006334-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2132bp|location=Sequence derived from alignment at ch4:5378720..5380851- (Aspergillus niger KJC3)
ATACAAAAGCCAGTCCCTCCCCCACCCCAAGAGGAACTGGAATAACACAT
AGCACTCCACAAGAAGATCTACATTAGTTGACTCTTTAACAACTCTCATA
CACGGTTCAGCAAACAGCCTCGACGTCATCGCTCTTGTCGCAAATCCATC
TCTCACATCTACGGTTCTGCTTTCTTTTTACCCTGCCCCGCCATATTTTA
ATCAACGGCCCGCCCCAGTCAGCCGCTGCCGTCACCCACGGTTCGCTTGC
AGTCAGTTCCTTTCCCTCTAGTATTCCCTACCAGGTCATCCACTGCTTCA
AATCCAAACATATCACACATGTCTCGATACGGCGACTACCGTCGCTCTAC
TGGGGCTCTCGACGAGGACCACTATTCGCGGGAACGTGAGCGTCACCGTC
ACCGTCACCGTTCACGTGGACCCCCGGTACTCGAGCGCCCCCGTCGTGTC
GAAGAGGATGATCGCTTCGAATATCGCCTTCAGGAACAGGAGCGATACGG
TCCCCCTGCCCGTCGCTCCGAAATATTCTACGAGGATGAGCATCTAGCCT
ACTCCCCAGGTCCGCTGGTCACCTACCGCCATGCCGAGAGCCCTCCCCCG
CGCCCGCGCCTTCTGCGCCGGCAGTCTTCCCTGGACACTTTTGACCGCCC
AACACGCAAGATCGATGAATATTACTATAGCGACTACCCGCCTAGAGCTC
CTCCTAGTCCCCCGCCAATGCGAAGACGGGGCTCTTTCCACCGTGTCCGT
TCGCCCGACTACTACGAGGAAATCCGAATTGCGGAACCAGACTACTATGG
CGACGAAGAGTACCGGGAGTTCCGTGAGCGGGATCGGATTGTCGAGCGCC
CACGTCGCTCAGTGAGTCGGTTTCGTGAGAGAATGGTAGAGGAAGTCGAC
GTGGAGAAACCGTATCCTCGGAAAGGCAAAACTCGTATGCCTCGCAAACT
GGTTCACACCAGCGCGATCCGCGAATTTGGCTATCCGTATGAGGAAGAGG
TGTGTATATTCATGGATACAAAGTCGAGCTGGAATGAAACATGGCCTGGG
CCTTGTCCAACGCTGACCGTGGCTGCAGGGAAAAATGATCATCATCCAGG
TTGCTCTTTCCAAGGAGCAGATCGACGAGGTCATCAGTCGAAGTCGTGAG
ATGAAGCGCATGACCGAGAGTAGGTTCTTCACGTGCTTGCCATCAAGAGA
GCAATGGTGCTGACAGTCTGGAAGCACGTTATAAGCATACTTCCTCACCC
TCACCCGTCCGTGACAGACAGCGCGACCGCATAGTGGAACGAATCGCTAT
GGAGAGTTACACCCCCCGCACGAGCCATGAGACTTTGCTCATCGAGCCAT
CTCCATCCCGGCACCGGTCGCGGTCGCGCCATCACCATCATCACCACCAC
CATGGCGAGCTGGAGGAAAAGAAAATAACCAGGACGGTCTCTCGGACACG
AAACGTGTCGGTCCAGGGTCGCCCTCGCCGTCGGTCATCGCCCGTGCGTA
GAATTGAGCGGTATGACGATGGAGCGCAGTCCACTAAGCTTCAGTCCGGC
CCACTTGCCATCGTTGTACGCCCGCGAGACAGCGATGACGATCTGCGGGA
ATACACGCAAATCGAGCGACGTGGCGGTGGAGAGATGATCCGGGACACGG
AGATTATTGGCGACGGCGAAGAAGAGGAGATCCTCGAGGTGAAAAAGGAT
CGCAGAGGTAGGATGAGCCTTGTCCGACGCAAGCGGTGAAGTGCGGATTC
TAAGTGATATTCATAGGCCCGAGCTCACGGCTCATGCGAGCGATGATGGC
GACGTTGACTTGATCCGGGTAGCTGAATGCGGACTCGGGGAGCATTTTTA
CGACTTTCAGCTATTTCCTTAACGATTTCGGTGTCTCCTATTTTTCATCT
GTACTATACCAGTTTGCTTGCGATGACGACTTGTACTATGATTCGATCGG
TGCGGTTGACGCCATACTTTCACGACGACGATAACGACAATGGGATTCTT
GTTTGTTTCATGGGCTTGTGCGCGTTATTTAGCTCTTGTTCCTGAGTTTG
TTGTGTGGATTGTGTGCTTAGACCCTATTTAATACTTACCAGGCCTTCTC
TGGACCTAGCCAATGCAAGAAATGTGACCAGT back to topCoding sequence (CDS) from alignment at ch4:5378720..5380851- >KJC3_006334-T1 ID=KJC3_006334-T1|Name=KJC3_006334-T1|organism=Aspergillus niger KJC3|type=CDS|length=5208bp|location=Sequence derived from alignment at ch4:5378720..5380851- (Aspergillus niger KJC3)
GCCCGAGCTCACGGCTCATGCGAGCGATGATGGCGACGTTGACTTGACAC
GTTATAAGCATACTTCCTCACCCTCACCCGTCCGTGACAGACAGCGCGAC
CGCATAGTGGAACGAATCGCTATGGAGAGTTACACCCCCCGCACGAGCCA
TGAGACTTTGCTCATCGAGCCATCTCCATCCCGGCACCGGTCGCGGTCGC
GCCATCACCATCATCACCACCACCATGGCGAGCTGGAGGAAAAGAAAATA
ACCAGGACGGTCTCTCGGACACGAAACGTGTCGGTCCAGGGTCGCCCTCG
CCGTCGGTCATCGCCCGTGCGTAGAATTGAGCGGTATGACGATGGAGCGC
AGTCCACTAAGCTTCAGTCCGGCCCACTTGCCATCGTTGTACGCCCGCGA
GACAGCGATGACGATCTGCGGGAATACACGCAAATCGAGCGACGTGGCGG
TGGAGAGATGATCCGGGACACGGAGATTATTGGCGACGGCGAAGAAGAGG
AGATCCTCGAGGTGAAAAAGGATCGCAGAGGGAAAAATGATCATCATCCA
GGTTGCTCTTTCCAAGGAGCAGATCGACGAGGTCATCAGTCGAAGTCGTG
AGATGAAGCGCATGACCGAGAATGTCTCGATACGGCGACTACCGTCGCTC
TACTGGGGCTCTCGACGAGGACCACTATTCGCGGGAACGTGAGCGTCACC
GTCACCGTCACCGTTCACGTGGACCCCCGGTACTCGAGCGCCCCCGTCGT
GTCGAAGAGGATGATCGCTTCGAATATCGCCTTCAGGAACAGGAGCGATA
CGGTCCCCCTGCCCGTCGCTCCGAAATATTCTACGAGGATGAGCATCTAG
CCTACTCCCCAGGTCCGCTGGTCACCTACCGCCATGCCGAGAGCCCTCCC
CCGCGCCCGCGCCTTCTGCGCCGGCAGTCTTCCCTGGACACTTTTGACCG
CCCAACACGCAAGATCGATGAATATTACTATAGCGACTACCCGCCTAGAG
CTCCTCCTAGTCCCCCGCCAATGCGAAGACGGGGCTCTTTCCACCGTGTC
CGTTCGCCCGACTACTACGAGGAAATCCGAATTGCGGAACCAGACTACTA
TGGCGACGAAGAGTACCGGGAGTTCCGTGAGCGGGATCGGATTGTCGAGC
GCCCACGTCGCTCAGTGAGTCGGTTTCGTGAGAGAATGGTAGAGGAAGTC
GACGTGGAGAAACCGTATCCTCGGAAAGGCAAAACTCGTATGCCTCGCAA
ACTGGTTCACACCAGCGCGATCCGCGAATTTGGCTATCCGTATGAGGAAG
AGGCCCGAGCTCACGGCTCATGCGAGCGATGATGGCGACGTTGACTTGAC
ACGTTATAAGCATACTTCCTCACCCTCACCCGTCCGTGACAGACAGCGCG
ACCGCATAGTGGAACGAATCGCTATGGAGAGTTACACCCCCCGCACGAGC
CATGAGACTTTGCTCATCGAGCCATCTCCATCCCGGCACCGGTCGCGGTC
GCGCCATCACCATCATCACCACCACCATGGCGAGCTGGAGGAAAAGAAAA
TAACCAGGACGGTCTCTCGGACACGAAACGTGTCGGTCCAGGGTCGCCCT
CGCCGTCGGTCATCGCCCGTGCGTAGAATTGAGCGGTATGACGATGGAGC
GCAGTCCACTAAGCTTCAGTCCGGCCCACTTGCCATCGTTGTACGCCCGC
GAGACAGCGATGACGATCTGCGGGAATACACGCAAATCGAGCGACGTGGC
GGTGGAGAGATGATCCGGGACACGGAGATTATTGGCGACGGCGAAGAAGA
GGAGATCCTCGAGGTGAAAAAGGATCGCAGAGGGAAAAATGATCATCATC
CAGGTTGCTCTTTCCAAGGAGCAGATCGACGAGGTCATCAGTCGAAGTCG
TGAGATGAAGCGCATGACCGAGAATGTCTCGATACGGCGACTACCGTCGC
TCTACTGGGGCTCTCGACGAGGACCACTATTCGCGGGAACGTGAGCGTCA
CCGTCACCGTCACCGTTCACGTGGACCCCCGGTACTCGAGCGCCCCCGTC
GTGTCGAAGAGGATGATCGCTTCGAATATCGCCTTCAGGAACAGGAGCGA
TACGGTCCCCCTGCCCGTCGCTCCGAAATATTCTACGAGGATGAGCATCT
AGCCTACTCCCCAGGTCCGCTGGTCACCTACCGCCATGCCGAGAGCCCTC
CCCCGCGCCCGCGCCTTCTGCGCCGGCAGTCTTCCCTGGACACTTTTGAC
CGCCCAACACGCAAGATCGATGAATATTACTATAGCGACTACCCGCCTAG
AGCTCCTCCTAGTCCCCCGCCAATGCGAAGACGGGGCTCTTTCCACCGTG
TCCGTTCGCCCGACTACTACGAGGAAATCCGAATTGCGGAACCAGACTAC
TATGGCGACGAAGAGTACCGGGAGTTCCGTGAGCGGGATCGGATTGTCGA
GCGCCCACGTCGCTCAGTGAGTCGGTTTCGTGAGAGAATGGTAGAGGAAG
TCGACGTGGAGAAACCGTATCCTCGGAAAGGCAAAACTCGTATGCCTCGC
AAACTGGTTCACACCAGCGCGATCCGCGAATTTGGCTATCCGTATGAGGA
AGAGGCCCGAGCTCACGGCTCATGCGAGCGATGATGGCGACGTTGACTTG
ACACGTTATAAGCATACTTCCTCACCCTCACCCGTCCGTGACAGACAGCG
CGACCGCATAGTGGAACGAATCGCTATGGAGAGTTACACCCCCCGCACGA
GCCATGAGACTTTGCTCATCGAGCCATCTCCATCCCGGCACCGGTCGCGG
TCGCGCCATCACCATCATCACCACCACCATGGCGAGCTGGAGGAAAAGAA
AATAACCAGGACGGTCTCTCGGACACGAAACGTGTCGGTCCAGGGTCGCC
CTCGCCGTCGGTCATCGCCCGTGCGTAGAATTGAGCGGTATGACGATGGA
GCGCAGTCCACTAAGCTTCAGTCCGGCCCACTTGCCATCGTTGTACGCCC
GCGAGACAGCGATGACGATCTGCGGGAATACACGCAAATCGAGCGACGTG
GCGGTGGAGAGATGATCCGGGACACGGAGATTATTGGCGACGGCGAAGAA
GAGGAGATCCTCGAGGTGAAAAAGGATCGCAGAGGGAAAAATGATCATCA
TCCAGGTTGCTCTTTCCAAGGAGCAGATCGACGAGGTCATCAGTCGAAGT
CGTGAGATGAAGCGCATGACCGAGAATGTCTCGATACGGCGACTACCGTC
GCTCTACTGGGGCTCTCGACGAGGACCACTATTCGCGGGAACGTGAGCGT
CACCGTCACCGTCACCGTTCACGTGGACCCCCGGTACTCGAGCGCCCCCG
TCGTGTCGAAGAGGATGATCGCTTCGAATATCGCCTTCAGGAACAGGAGC
GATACGGTCCCCCTGCCCGTCGCTCCGAAATATTCTACGAGGATGAGCAT
CTAGCCTACTCCCCAGGTCCGCTGGTCACCTACCGCCATGCCGAGAGCCC
TCCCCCGCGCCCGCGCCTTCTGCGCCGGCAGTCTTCCCTGGACACTTTTG
ACCGCCCAACACGCAAGATCGATGAATATTACTATAGCGACTACCCGCCT
AGAGCTCCTCCTAGTCCCCCGCCAATGCGAAGACGGGGCTCTTTCCACCG
TGTCCGTTCGCCCGACTACTACGAGGAAATCCGAATTGCGGAACCAGACT
ACTATGGCGACGAAGAGTACCGGGAGTTCCGTGAGCGGGATCGGATTGTC
GAGCGCCCACGTCGCTCAGTGAGTCGGTTTCGTGAGAGAATGGTAGAGGA
AGTCGACGTGGAGAAACCGTATCCTCGGAAAGGCAAAACTCGTATGCCTC
GCAAACTGGTTCACACCAGCGCGATCCGCGAATTTGGCTATCCGTATGAG
GAAGAGGCCCGAGCTCACGGCTCATGCGAGCGATGATGGCGACGTTGACT
TGACACGTTATAAGCATACTTCCTCACCCTCACCCGTCCGTGACAGACAG
CGCGACCGCATAGTGGAACGAATCGCTATGGAGAGTTACACCCCCCGCAC
GAGCCATGAGACTTTGCTCATCGAGCCATCTCCATCCCGGCACCGGTCGC
GGTCGCGCCATCACCATCATCACCACCACCATGGCGAGCTGGAGGAAAAG
AAAATAACCAGGACGGTCTCTCGGACACGAAACGTGTCGGTCCAGGGTCG
CCCTCGCCGTCGGTCATCGCCCGTGCGTAGAATTGAGCGGTATGACGATG
GAGCGCAGTCCACTAAGCTTCAGTCCGGCCCACTTGCCATCGTTGTACGC
CCGCGAGACAGCGATGACGATCTGCGGGAATACACGCAAATCGAGCGACG
TGGCGGTGGAGAGATGATCCGGGACACGGAGATTATTGGCGACGGCGAAG
AAGAGGAGATCCTCGAGGTGAAAAAGGATCGCAGAGGGAAAAATGATCAT
CATCCAGGTTGCTCTTTCCAAGGAGCAGATCGACGAGGTCATCAGTCGAA
GTCGTGAGATGAAGCGCATGACCGAGAATGTCTCGATACGGCGACTACCG
TCGCTCTACTGGGGCTCTCGACGAGGACCACTATTCGCGGGAACGTGAGC
GTCACCGTCACCGTCACCGTTCACGTGGACCCCCGGTACTCGAGCGCCCC
CGTCGTGTCGAAGAGGATGATCGCTTCGAATATCGCCTTCAGGAACAGGA
GCGATACGGTCCCCCTGCCCGTCGCTCCGAAATATTCTACGAGGATGAGC
ATCTAGCCTACTCCCCAGGTCCGCTGGTCACCTACCGCCATGCCGAGAGC
CCTCCCCCGCGCCCGCGCCTTCTGCGCCGGCAGTCTTCCCTGGACACTTT
TGACCGCCCAACACGCAAGATCGATGAATATTACTATAGCGACTACCCGC
CTAGAGCTCCTCCTAGTCCCCCGCCAATGCGAAGACGGGGCTCTTTCCAC
CGTGTCCGTTCGCCCGACTACTACGAGGAAATCCGAATTGCGGAACCAGA
CTACTATGGCGACGAAGAGTACCGGGAGTTCCGTGAGCGGGATCGGATTG
TCGAGCGCCCACGTCGCTCAGTGAGTCGGTTTCGTGAGAGAATGGTAGAG
GAAGTCGACGTGGAGAAACCGTATCCTCGGAAAGGCAAAACTCGTATGCC
TCGCAAACTGGTTCACACCAGCGCGATCCGCGAATTTGGCTATCCGTATG
AGGAAGAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006334-T1.utr3p1 | KJC3_006334-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006334-T1.utr5p1 | KJC3_006334-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5378720..5380851 - |
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