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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:5378720..5380851- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006334-T2 ID=KJC3_006334-T2|Name=KJC3_006334-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2132bp|location=Sequence derived from alignment at ch4:5378720..5380851- (Aspergillus niger KJC3)
ATACAAAAGCCAGTCCCTCCCCCACCCCAAGAGGAACTGGAATAACACAT
AGCACTCCACAAGAAGATCTACATTAGTTGACTCTTTAACAACTCTCATA
CACGGTTCAGCAAACAGCCTCGACGTCATCGCTCTTGTCGCAAATCCATC
TCTCACATCTACGGTTCTGCTTTCTTTTTACCCTGCCCCGCCATATTTTA
ATCAACGGCCCGCCCCAGTCAGCCGCTGCCGTCACCCACGGTTCGCTTGC
AGTCAGTTCCTTTCCCTCTAGTATTCCCTACCAGGTCATCCACTGCTTCA
AATCCAAACATATCACACATGTCTCGATACGGCGACTACCGTCGCTCTAC
TGGGGCTCTCGACGAGGACCACTATTCGCGGGAACGTGAGCGTCACCGTC
ACCGTCACCGTTCACGTGGACCCCCGGTACTCGAGCGCCCCCGTCGTGTC
GAAGAGGATGATCGCTTCGAATATCGCCTTCAGGAACAGGAGCGATACGG
TCCCCCTGCCCGTCGCTCCGAAATATTCTACGAGGATGAGCATCTAGCCT
ACTCCCCAGGTCCGCTGGTCACCTACCGCCATGCCGAGAGCCCTCCCCCG
CGCCCGCGCCTTCTGCGCCGGCAGTCTTCCCTGGACACTTTTGACCGCCC
AACACGCAAGATCGATGAATATTACTATAGCGACTACCCGCCTAGAGCTC
CTCCTAGTCCCCCGCCAATGCGAAGACGGGGCTCTTTCCACCGTGTCCGT
TCGCCCGACTACTACGAGGAAATCCGAATTGCGGAACCAGACTACTATGG
CGACGAAGAGTACCGGGAGTTCCGTGAGCGGGATCGGATTGTCGAGCGCC
CACGTCGCTCAGTGAGTCGGTTTCGTGAGAGAATGGTAGAGGAAGTCGAC
GTGGAGAAACCGTATCCTCGGAAAGGCAAAACTCGTATGCCTCGCAAACT
GGTTCACACCAGCGCGATCCGCGAATTTGGCTATCCGTATGAGGAAGAGG
TGTGTATATTCATGGATACAAAGTCGAGCTGGAATGAAACATGGCCTGGG
CCTTGTCCAACGCTGACCGTGGCTGCAGGGAAAAATGATCATCATCCAGG
TTGCTCTTTCCAAGGAGCAGATCGACGAGGTCATCAGTCGAAGTCGTGAG
ATGAAGCGCATGACCGAGAGTAGGTTCTTCACGTGCTTGCCATCAAGAGA
GCAATGGTGCTGACAGTCTGGAAGCACGTTATAAGCATACTTCCTCACCC
TCACCCGTCCGTGACAGACAGCGCGACCGCATAGTGGAACGAATCGCTAT
GGAGAGTTACACCCCCCGCACGAGCCATGAGACTTTGCTCATCGAGCCAT
CTCCATCCCGGCACCGGTCGCGGTCGCGCCATCACCATCATCACCACCAC
CATGGCGAGCTGGAGGAAAAGAAAATAACCAGGACGGTCTCTCGGACACG
AAACGTGTCGGTCCAGGGTCGCCCTCGCCGTCGGTCATCGCCCGTGCGTA
GAATTGAGCGGTATGACGATGGAGCGCAGTCCACTAAGCTTCAGTCCGGC
CCACTTGCCATCGTTGTACGCCCGCGAGACAGCGATGACGATCTGCGGGA
ATACACGCAAATCGAGCGACGTGGCGGTGGAGAGATGATCCGGGACACGG
AGATTATTGGCGACGGCGAAGAAGAGGAGATCCTCGAGGTGAAAAAGGAT
CGCAGAGGTAGGATGAGCCTTGTCCGACGCAAGCGGTGAAGTGCGGATTC
TAAGTGATATTCATAGGCCCGAGCTCACGGCTCATGCGAGCGATGATGGC
GACGTTGACTTGATCCGGGTAGCTGAATGCGGACTCGGGGAGCATTTTTA
CGACTTTCAGCTATTTCCTTAACGATTTCGGTGTCTCCTATTTTTCATCT
GTACTATACCAGTTTGCTTGCGATGACGACTTGTACTATGATTCGATCGG
TGCGGTTGACGCCATACTTTCACGACGACGATAACGACAATGGGATTCTT
GTTTGTTTCATGGGCTTGTGCGCGTTATTTAGCTCTTGTTCCTGAGTTTG
TTGTGTGGATTGTGTGCTTAGACCCTATTTAATACTTACCAGGCCTTCTC
TGGACCTAGCCAATGCAAGAAATGTGACCAGT back to topCoding sequence (CDS) from alignment at ch4:5378720..5380851- >KJC3_006334-T2 ID=KJC3_006334-T2|Name=KJC3_006334-T2|organism=Aspergillus niger KJC3|type=CDS|length=3861bp|location=Sequence derived from alignment at ch4:5378720..5380851- (Aspergillus niger KJC3)
CACGTTATAAGCATACTTCCTCACCCTCACCCGTCCGTGACAGACAGCGC
GACCGCATAGTGGAACGAATCGCTATGGAGAGTTACACCCCCCGCACGAG
CCATGAGACTTTGCTCATCGAGCCATCTCCATCCCGGCACCGGTCGCGGT
CGCGCCATCACCATCATCACCACCACCATGGCGAGCTGGAGGAAAAGAAA
ATAACCAGGACGGTCTCTCGGACACGAAACGTGTCGGTCCAGGGTCGCCC
TCGCCGTCGGTCATCGCCCGTGCGTAGAATTGAGCGGTATGACGATGGAG
CGCAGTCCACTAAGCTTCAGTCCGGCCCACTTGCCATCGTTGTACGCCCG
CGAGACAGCGATGACGATCTGCGGGAATACACGCAAATCGAGCGACGTGG
CGGTGGAGAGATGATCCGGGACACGGAGATTATTGGCGACGGCGAAGAAG
AGGAGATCCTCGAGGTGAAAAAGGATCGCAGAGGTAGGATGAGCCTTGTC
CGACGCAAGCGGTGAGGAAAAATGATCATCATCCAGGTTGCTCTTTCCAA
GGAGCAGATCGACGAGGTCATCAGTCGAAGTCGTGAGATGAAGCGCATGA
CCGAGAATGTCTCGATACGGCGACTACCGTCGCTCTACTGGGGCTCTCGA
CGAGGACCACTATTCGCGGGAACGTGAGCGTCACCGTCACCGTCACCGTT
CACGTGGACCCCCGGTACTCGAGCGCCCCCGTCGTGTCGAAGAGGATGAT
CGCTTCGAATATCGCCTTCAGGAACAGGAGCGATACGGTCCCCCTGCCCG
TCGCTCCGAAATATTCTACGAGGATGAGCATCTAGCCTACTCCCCAGGTC
CGCTGGTCACCTACCGCCATGCCGAGAGCCCTCCCCCGCGCCCGCGCCTT
CTGCGCCGGCAGTCTTCCCTGGACACTTTTGACCGCCCAACACGCAAGAT
CGATGAATATTACTATAGCGACTACCCGCCTAGAGCTCCTCCTAGTCCCC
CGCCAATGCGAAGACGGGGCTCTTTCCACCGTGTCCGTTCGCCCGACTAC
TACGAGGAAATCCGAATTGCGGAACCAGACTACTATGGCGACGAAGAGTA
CCGGGAGTTCCGTGAGCGGGATCGGATTGTCGAGCGCCCACGTCGCTCAG
TGAGTCGGTTTCGTGAGAGAATGGTAGAGGAAGTCGACGTGGAGAAACCG
TATCCTCGGAAAGGCAAAACTCGTATGCCTCGCAAACTGGTTCACACCAG
CGCGATCCGCGAATTTGGCTATCCGTATGAGGAAGAGCACGTTATAAGCA
TACTTCCTCACCCTCACCCGTCCGTGACAGACAGCGCGACCGCATAGTGG
AACGAATCGCTATGGAGAGTTACACCCCCCGCACGAGCCATGAGACTTTG
CTCATCGAGCCATCTCCATCCCGGCACCGGTCGCGGTCGCGCCATCACCA
TCATCACCACCACCATGGCGAGCTGGAGGAAAAGAAAATAACCAGGACGG
TCTCTCGGACACGAAACGTGTCGGTCCAGGGTCGCCCTCGCCGTCGGTCA
TCGCCCGTGCGTAGAATTGAGCGGTATGACGATGGAGCGCAGTCCACTAA
GCTTCAGTCCGGCCCACTTGCCATCGTTGTACGCCCGCGAGACAGCGATG
ACGATCTGCGGGAATACACGCAAATCGAGCGACGTGGCGGTGGAGAGATG
ATCCGGGACACGGAGATTATTGGCGACGGCGAAGAAGAGGAGATCCTCGA
GGTGAAAAAGGATCGCAGAGGTAGGATGAGCCTTGTCCGACGCAAGCGGT
GAGGAAAAATGATCATCATCCAGGTTGCTCTTTCCAAGGAGCAGATCGAC
GAGGTCATCAGTCGAAGTCGTGAGATGAAGCGCATGACCGAGAATGTCTC
GATACGGCGACTACCGTCGCTCTACTGGGGCTCTCGACGAGGACCACTAT
TCGCGGGAACGTGAGCGTCACCGTCACCGTCACCGTTCACGTGGACCCCC
GGTACTCGAGCGCCCCCGTCGTGTCGAAGAGGATGATCGCTTCGAATATC
GCCTTCAGGAACAGGAGCGATACGGTCCCCCTGCCCGTCGCTCCGAAATA
TTCTACGAGGATGAGCATCTAGCCTACTCCCCAGGTCCGCTGGTCACCTA
CCGCCATGCCGAGAGCCCTCCCCCGCGCCCGCGCCTTCTGCGCCGGCAGT
CTTCCCTGGACACTTTTGACCGCCCAACACGCAAGATCGATGAATATTAC
TATAGCGACTACCCGCCTAGAGCTCCTCCTAGTCCCCCGCCAATGCGAAG
ACGGGGCTCTTTCCACCGTGTCCGTTCGCCCGACTACTACGAGGAAATCC
GAATTGCGGAACCAGACTACTATGGCGACGAAGAGTACCGGGAGTTCCGT
GAGCGGGATCGGATTGTCGAGCGCCCACGTCGCTCAGTGAGTCGGTTTCG
TGAGAGAATGGTAGAGGAAGTCGACGTGGAGAAACCGTATCCTCGGAAAG
GCAAAACTCGTATGCCTCGCAAACTGGTTCACACCAGCGCGATCCGCGAA
TTTGGCTATCCGTATGAGGAAGAGCACGTTATAAGCATACTTCCTCACCC
TCACCCGTCCGTGACAGACAGCGCGACCGCATAGTGGAACGAATCGCTAT
GGAGAGTTACACCCCCCGCACGAGCCATGAGACTTTGCTCATCGAGCCAT
CTCCATCCCGGCACCGGTCGCGGTCGCGCCATCACCATCATCACCACCAC
CATGGCGAGCTGGAGGAAAAGAAAATAACCAGGACGGTCTCTCGGACACG
AAACGTGTCGGTCCAGGGTCGCCCTCGCCGTCGGTCATCGCCCGTGCGTA
GAATTGAGCGGTATGACGATGGAGCGCAGTCCACTAAGCTTCAGTCCGGC
CCACTTGCCATCGTTGTACGCCCGCGAGACAGCGATGACGATCTGCGGGA
ATACACGCAAATCGAGCGACGTGGCGGTGGAGAGATGATCCGGGACACGG
AGATTATTGGCGACGGCGAAGAAGAGGAGATCCTCGAGGTGAAAAAGGAT
CGCAGAGGTAGGATGAGCCTTGTCCGACGCAAGCGGTGAGGAAAAATGAT
CATCATCCAGGTTGCTCTTTCCAAGGAGCAGATCGACGAGGTCATCAGTC
GAAGTCGTGAGATGAAGCGCATGACCGAGAATGTCTCGATACGGCGACTA
CCGTCGCTCTACTGGGGCTCTCGACGAGGACCACTATTCGCGGGAACGTG
AGCGTCACCGTCACCGTCACCGTTCACGTGGACCCCCGGTACTCGAGCGC
CCCCGTCGTGTCGAAGAGGATGATCGCTTCGAATATCGCCTTCAGGAACA
GGAGCGATACGGTCCCCCTGCCCGTCGCTCCGAAATATTCTACGAGGATG
AGCATCTAGCCTACTCCCCAGGTCCGCTGGTCACCTACCGCCATGCCGAG
AGCCCTCCCCCGCGCCCGCGCCTTCTGCGCCGGCAGTCTTCCCTGGACAC
TTTTGACCGCCCAACACGCAAGATCGATGAATATTACTATAGCGACTACC
CGCCTAGAGCTCCTCCTAGTCCCCCGCCAATGCGAAGACGGGGCTCTTTC
CACCGTGTCCGTTCGCCCGACTACTACGAGGAAATCCGAATTGCGGAACC
AGACTACTATGGCGACGAAGAGTACCGGGAGTTCCGTGAGCGGGATCGGA
TTGTCGAGCGCCCACGTCGCTCAGTGAGTCGGTTTCGTGAGAGAATGGTA
GAGGAAGTCGACGTGGAGAAACCGTATCCTCGGAAAGGCAAAACTCGTAT
GCCTCGCAAACTGGTTCACACCAGCGCGATCCGCGAATTTGGCTATCCGT
ATGAGGAAGAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006334-T2.utr3p1 | KJC3_006334-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006334-T2.utr5p1 | KJC3_006334-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:5378720..5380851 - |
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